RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 MYMXA0A1B0GTQ4 84 aa-4.51□□□□□ -3.13
SNORA40.4-201ENST00000390971 ATP6V1G2-DDX39BF2Z307 99 aa-4.53□□□□□ -3.13
SNORA40.4-201ENST00000390971 ACYP1P07311 99 aa-4.53□□□□□ -3.13
SNORA40.4-201ENST00000390971 CEP162Q5TB80 1403 aa-4.54□□□□□ -3.14
SNORA40.4-201ENST00000390971 C20orf78Q9BR46 151 aa-4.54□□□□□ -3.14
SNORA40.4-201ENST00000390971 DEFB4AO15263 64 aa-4.56□□□□□ -3.14
SNORA40.4-201ENST00000390971 NCMAPQ5T1S8 102 aa-4.56□□□□□ -3.14
SNORA40.4-201ENST00000390971 NCOA2Q15596 1464 aa-4.57□□□□□ -3.14
SNORA40.4-201ENST00000390971 CRYBG3Q68DQ2 2970 aa-4.59□□□□□ -3.14
SNORA40.4-201ENST00000390971 TNP1P09430 55 aa-4.59□□□□□ -3.14
SNORA40.4-201ENST00000390971 DIP2BQ9P265 1576 aa-4.59□□□□□ -3.14
SNORA40.4-201ENST00000390971 ANKRD26Q9UPS8 1709 aa-4.62□□□□□ -3.15
SNORA40.4-201ENST00000390971 ZNF831Q5JPB2 1677 aa-4.62□□□□□ -3.15
SNORA40.4-201ENST00000390971 MYO15AQ9UKN7 3530 aa-4.63□□□□□ -3.15
SNORA40.4-201ENST00000390971 TMEM131LA2VDJ0 1609 aa-4.63□□□□□ -3.15
SNORA40.4-201ENST00000390971 URB2Q14146 1524 aaKnown RBP-4.63□□□□□ -3.15
SNORA40.4-201ENST00000390971 CFAP54Q96N23 3096 aa-4.64□□□□□ -3.15
SNORA40.4-201ENST00000390971 DDX60LQ5H9U9 1706 aaKnown RBP-4.64□□□□□ -3.15
SNORA40.4-201ENST00000390971 ABCC10Q5T3U5 1492 aa-4.64□□□□□ -3.15
SNORA40.4-201ENST00000390971 M0R143 59 aa-4.65□□□□□ -3.15
SNORA40.4-201ENST00000390971 IFI27P40305 119 aaPredicted RBP-4.65□□□□□ -3.15
SNORA40.4-201ENST00000390971 CEBPZOSA8MTT3 80 aa-4.66□□□□□ -3.16
SNORA40.4-201ENST00000390971 RABAC1Q9UI14 185 aa-4.66□□□□□ -3.16
SNORA40.4-201ENST00000390971 CCDC88BA6NC98 1476 aa-4.68□□□□□ -3.16
SNORA40.4-201ENST00000390971 ANKRD36CQ5JPF3 1778 aa-4.68□□□□□ -3.16
SNORA40.4-201ENST00000390971 SPEGQ15772 3267 aa-4.68□□□□□ -3.16
SNORA40.4-201ENST00000390971 MMP24-AS1A0A0U1RRL7 71 aa-4.69□□□□□ -3.16
SNORA40.4-201ENST00000390971 ARFGEF2Q9Y6D5 1785 aa-4.69□□□□□ -3.16
SNORA40.4-201ENST00000390971 UMAD1C9J7I0 102 aa-4.73□□□□□ -3.17
SNORA40.4-201ENST00000390971 SNRPFP62306 86 aaKnown RBP-4.74□□□□□ -3.17
SNORA40.4-201ENST00000390971 DMDP11532 3685 aa-4.75□□□□□ -3.17
SNORA40.4-201ENST00000390971 NDUFA4O00483 81 aa-4.75□□□□□ -3.17
SNORA40.4-201ENST00000390971 MT1FP04733 61 aa-4.75□□□□□ -3.17
SNORA40.4-201ENST00000390971 LINC00643Q86TS7 51 aa-4.75□□□□□ -3.17
SNORA40.4-201ENST00000390971 THOC2Q8NI27 1593 aaKnown RBP-4.75□□□□□ -3.17
SNORA40.4-201ENST00000390971 WDFY3Q8IZQ1 3526 aa-4.76□□□□□ -3.17
SNORA40.4-201ENST00000390971 CCNB3Q8WWL7 1395 aa-4.77□□□□□ -3.17
SNORA40.4-201ENST00000390971 TIMM8BQ9Y5J9 83 aaPredicted RBP-4.77□□□□□ -3.17
SNORA40.4-201ENST00000390971 ITSN1Q15811 1721 aa-4.8□□□□□ -3.18
SNORA40.4-201ENST00000390971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-4.81□□□□□ -3.18
SNORA40.4-201ENST00000390971 SNHG12Q9BXW3 62 aa-4.81□□□□□ -3.18
SNORA40.4-201ENST00000390971 AKAP12Q02952 1782 aa-4.82□□□□□ -3.18
SNORA40.4-201ENST00000390971 TOGARAM1Q9Y4F4 1720 aa-4.83□□□□□ -3.18
SNORA40.4-201ENST00000390971 CENPEQ02224 2701 aa-4.83□□□□□ -3.18
SNORA40.4-201ENST00000390971 PLCH1Q4KWH8 1693 aa-4.83□□□□□ -3.18
SNORA40.4-201ENST00000390971 PIK3C2BO00750 1634 aa-4.84□□□□□ -3.18
SNORA40.4-201ENST00000390971 PARP4Q9UKK3 1724 aaKnown RBP-4.84□□□□□ -3.18
SNORA40.4-201ENST00000390971 DEFB131BA0A096LNP1 70 aa-4.86□□□□□ -3.19
SNORA40.4-201ENST00000390971 PYY3Q5JQD4 70 aa-4.87□□□□□ -3.19
SNORA40.4-201ENST00000390971 VPS8Q8N3P4 1428 aa-4.88□□□□□ -3.19
SNORA40.4-201ENST00000390971 LINC01546A6NGU7 62 aa-4.88□□□□□ -3.19
SNORA40.4-201ENST00000390971 KIAA0586Q9BVV6 1533 aa-4.89□□□□□ -3.19
SNORA40.4-201ENST00000390971 IGLV5-48A0A075B6I7 105 aa-4.9□□□□□ -3.19
SNORA40.4-201ENST00000390971 ZC3H13Q5T200 1668 aaKnown RBP-4.9□□□□□ -3.19
SNORA40.4-201ENST00000390971 ITSN2Q9NZM3 1697 aa-4.92□□□□□ -3.2
SNORA40.4-201ENST00000390971 RPS29P62273 56 aaKnown RBP-4.92□□□□□ -3.2
SNORA40.4-201ENST00000390971 WT1-ASQ06250 92 aa-4.92□□□□□ -3.2
SNORA40.4-201ENST00000390971 NREPQ16612 68 aa-4.93□□□□□ -3.2
SNORA40.4-201ENST00000390971 S100A16Q96FQ6 103 aaKnown RBP-4.93□□□□□ -3.2
SNORA40.4-201ENST00000390971 CEP350Q5VT06 3117 aa-4.93□□□□□ -3.2
SNORA40.4-201ENST00000390971 MRPL33O75394 65 aaKnown RBP-4.94□□□□□ -3.2
SNORA40.4-201ENST00000390971 PKIAP61925 76 aa-4.95□□□□□ -3.2
SNORA40.4-201ENST00000390971 MAP3K4Q9Y6R4 1608 aa-4.98□□□□□ -3.21
SNORA40.4-201ENST00000390971 KIF14Q15058 1648 aa-4.99□□□□□ -3.21
SNORA40.4-201ENST00000390971 VPS13CQ709C8 3753 aa-5□□□□□ -3.21
SNORA40.4-201ENST00000390971 HMGA1P17096 107 aaKnown RBP-5.01□□□□□ -3.21
SNORA40.4-201ENST00000390971 PEG3Q9GZU2 1588 aa-5.01□□□□□ -3.21
SNORA40.4-201ENST00000390971 FRYLO94915 3013 aa-5.02□□□□□ -3.21
SNORA40.4-201ENST00000390971 ABCC3O15438 1527 aa-5.02□□□□□ -3.21
SNORA40.4-201ENST00000390971 MAST1Q9Y2H9 1570 aa-5.03□□□□□ -3.21
SNORA40.4-201ENST00000390971 S100A8P05109 93 aa-5.03□□□□□ -3.21
SNORA40.4-201ENST00000390971 ATP5EP2Q5VTU8 51 aa-5.03□□□□□ -3.21
SNORA40.4-201ENST00000390971 CFAP43Q8NDM7 1665 aa-5.03□□□□□ -3.21
SNORA40.4-201ENST00000390971 RICTORQ6R327 1708 aa-5.04□□□□□ -3.22
SNORA40.4-201ENST00000390971 LY75O60449 1722 aa-5.05□□□□□ -3.22
SNORA40.4-201ENST00000390971 PVALEFA0A1B0GWK0 134 aa-5.05□□□□□ -3.22
SNORA40.4-201ENST00000390971 KIF1AQ12756 1690 aa-5.05□□□□□ -3.22
SNORA40.4-201ENST00000390971 SMARCA2P51531 1590 aa-5.08□□□□□ -3.22
SNORA40.4-201ENST00000390971 PCNTO95613 3336 aa-5.08□□□□□ -3.22
SNORA40.4-201ENST00000390971 TJP1Q07157 1748 aa-5.08□□□□□ -3.22
SNORA40.4-201ENST00000390971 A8MTW9 85 aa-5.09□□□□□ -3.22
SNORA40.4-201ENST00000390971 HFM1A2PYH4 1435 aa-5.09□□□□□ -3.22
SNORA40.4-201ENST00000390971 RPS27P42677 84 aaKnown RBP-5.11□□□□□ -3.23
SNORA40.4-201ENST00000390971 RPS27LQ71UM5 84 aaKnown RBP-5.11□□□□□ -3.23
SNORA40.4-201ENST00000390971 RNF17Q9BXT8 1623 aaKnown RBP-5.12□□□□□ -3.23
SNORA40.4-201ENST00000390971 BVES-AS1Q5T3Y7 98 aa-5.12□□□□□ -3.23
SNORA40.4-201ENST00000390971 Q9H521 79 aa-5.12□□□□□ -3.23
SNORA40.4-201ENST00000390971 ARHGAP35Q9NRY4 1499 aa-5.13□□□□□ -3.23
SNORA40.4-201ENST00000390971 KCNQ1DNQ9H478 68 aa-5.13□□□□□ -3.23
SNORA40.4-201ENST00000390971 SZT2Q5T011 3432 aa-5.14□□□□□ -3.23
SNORA40.4-201ENST00000390971 SPART-AS1P0CW21 52 aa-5.14□□□□□ -3.23
SNORA40.4-201ENST00000390971 KANTRA0A1W2PQU2 76 aa-5.15□□□□□ -3.23
SNORA40.4-201ENST00000390971 PPLO60437 1756 aa-5.16□□□□□ -3.24
SNORA40.4-201ENST00000390971 UBL5Q9BZL1 73 aa-5.16□□□□□ -3.24
SNORA40.4-201ENST00000390971 A0A087WXM4 84 aa-5.18□□□□□ -3.24
SNORA40.4-201ENST00000390971 CRIP1P50238 77 aa-5.18□□□□□ -3.24
SNORA40.4-201ENST00000390971 NRAPQ86VF7 1730 aa-5.18□□□□□ -3.24
SNORA40.4-201ENST00000390971 WDFY4Q6ZS81 3184 aa-5.19□□□□□ -3.24
SNORA40.4-201ENST00000390971 DEFB136Q30KP8 78 aa-5.19□□□□□ -3.24
SNORA40.4-201ENST00000390971 MINOS1Q5TGZ0 78 aa-5.19□□□□□ -3.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms