RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 TSC22D3Q99576 134 aa-0.8□□□□□ -2.54
RNU6-48P-201ENST00000384161 PRO1933Q9H354 126 aa-0.8□□□□□ -2.54
RNU6-48P-201ENST00000384161 UBE2L5PA0A1B0GUS4 154 aa-0.81□□□□□ -2.54
RNU6-48P-201ENST00000384161 ATP5EP56381 51 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-48P-201ENST00000384161 UBE2L3P68036 154 aaKnown RBP-0.81□□□□□ -2.54
RNU6-48P-201ENST00000384161 DEFB136Q30KP8 78 aa-0.81□□□□□ -2.54
RNU6-48P-201ENST00000384161 FAM223AQ8IWN6 122 aa-0.81□□□□□ -2.54
RNU6-48P-201ENST00000384161 K7EP13 123 aa-0.82□□□□□ -2.54
RNU6-48P-201ENST00000384161 AKAIN1P0CW23 69 aa-0.82□□□□□ -2.54
RNU6-48P-201ENST00000384161 S100A12P80511 92 aa-0.82□□□□□ -2.54
RNU6-48P-201ENST00000384161 TDRG1Q3Y452 100 aa-0.82□□□□□ -2.54
RNU6-48P-201ENST00000384161 LINC00474Q9P2X8 69 aa-0.82□□□□□ -2.54
RNU6-48P-201ENST00000384161 ARL2-SNX15V9GYD0 113 aa-0.82□□□□□ -2.54
RNU6-48P-201ENST00000384161 KIF20BQ96Q89 1820 aa-0.82□□□□□ -2.54
RNU6-48P-201ENST00000384161 CD52P31358 61 aa-0.83□□□□□ -2.54
RNU6-48P-201ENST00000384161 UBE2D3P61077 147 aa-0.83□□□□□ -2.54
RNU6-48P-201ENST00000384161 DEFB108BQ8NET1 73 aa-0.83□□□□□ -2.54
RNU6-48P-201ENST00000384161 F6UZH7 168 aa-0.84□□□□□ -2.54
RNU6-48P-201ENST00000384161 RPS27LQ71UM5 84 aaKnown RBP-0.84□□□□□ -2.54
RNU6-48P-201ENST00000384161 PP6455Q8WZ26 134 aa-0.84□□□□□ -2.54
RNU6-48P-201ENST00000384161 LOC100130705A0A1B0GUX0 176 aa-0.85□□□□□ -2.55
RNU6-48P-201ENST00000384161 OOSP1A8MZH6 123 aa-0.85□□□□□ -2.55
RNU6-48P-201ENST00000384161 COX6CP09669 75 aa-0.85□□□□□ -2.55
RNU6-48P-201ENST00000384161 HTN3P15516 51 aa-0.85□□□□□ -2.55
RNU6-48P-201ENST00000384161 PDCD11Q14690 1871 aaKnown RBP-0.85□□□□□ -2.55
RNU6-48P-201ENST00000384161 C9orf153Q5TBE3 101 aa-0.85□□□□□ -2.55
RNU6-48P-201ENST00000384161 CRIPTQ9P021 101 aa-0.85□□□□□ -2.55
RNU6-48P-201ENST00000384161 FAM24AA6NFZ4 105 aa-0.86□□□□□ -2.55
RNU6-48P-201ENST00000384161 GNG11P61952 73 aa-0.86□□□□□ -2.55
RNU6-48P-201ENST00000384161 DEFB133Q30KQ1 61 aa-0.86□□□□□ -2.55
RNU6-48P-201ENST00000384161 ARFGEF2Q9Y6D5 1785 aa-0.86□□□□□ -2.55
RNU6-48P-201ENST00000384161 A0A1B0GWA3 101 aa-0.87□□□□□ -2.55
RNU6-48P-201ENST00000384161 HMGN1P05114 100 aa-0.87□□□□□ -2.55
RNU6-48P-201ENST00000384161 S4R3F8 94 aa-0.87□□□□□ -2.55
RNU6-48P-201ENST00000384161 TRAPPC2P0DI81 140 aa-0.88□□□□□ -2.55
RNU6-48P-201ENST00000384161 TRAPPC2BP0DI82 140 aa-0.88□□□□□ -2.55
RNU6-48P-201ENST00000384161 UBE2D2P62837 147 aa-0.88□□□□□ -2.55
RNU6-48P-201ENST00000384161 Q0VG73 95 aa-0.88□□□□□ -2.55
RNU6-48P-201ENST00000384161 FAM107BQ9H098 131 aa-0.88□□□□□ -2.55
RNU6-48P-201ENST00000384161 MANBALQ9NQG1 85 aa-0.88□□□□□ -2.55
RNU6-48P-201ENST00000384161 PRO1854Q9UHT4 67 aa-0.88□□□□□ -2.55
RNU6-48P-201ENST00000384161 NAP1L6A6NFF2 107 aa-0.89□□□□□ -2.55
RNU6-48P-201ENST00000384161 CPSF4LA6NMK7 179 aaKnown RBP-0.89□□□□□ -2.55
RNU6-48P-201ENST00000384161 UQCRHP07919 91 aa-0.89□□□□□ -2.55
RNU6-48P-201ENST00000384161 SAA2P0DJI9 122 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-48P-201ENST00000384161 ANKRD36A6QL64 1941 aa-0.89□□□□□ -2.55
RNU6-48P-201ENST00000384161 FAM223BA6NKX1 122 aa-0.9□□□□□ -2.55
RNU6-48P-201ENST00000384161 CCL22O00626 93 aa-0.9□□□□□ -2.55
RNU6-48P-201ENST00000384161 SEC11AP67812 179 aa-0.9□□□□□ -2.55
RNU6-48P-201ENST00000384161 LINC01556Q5JQF7 62 aa-0.9□□□□□ -2.55
RNU6-48P-201ENST00000384161 NCMAPQ5T1S8 102 aa-0.9□□□□□ -2.55
RNU6-48P-201ENST00000384161 C12orf57Q99622 126 aa-0.9□□□□□ -2.55
RNU6-48P-201ENST00000384161 Q9Y3F1 56 aa-0.9□□□□□ -2.55
RNU6-48P-201ENST00000384161 H3BUX3 64 aa-0.91□□□□□ -2.56
RNU6-48P-201ENST00000384161 LCN9Q8WX39 176 aa-0.91□□□□□ -2.56
RNU6-48P-201ENST00000384161 IER3IP1Q9Y5U9 82 aa-0.91□□□□□ -2.56
RNU6-48P-201ENST00000384161 ANKARQ7Z5J8 1434 aa-0.91□□□□□ -2.56
RNU6-48P-201ENST00000384161 SNAPC5O75971 98 aa-0.92□□□□□ -2.56
RNU6-48P-201ENST00000384161 HMGA1P17096 107 aaKnown RBP-0.92□□□□□ -2.56
RNU6-48P-201ENST00000384161 SPART-AS1P0CW21 52 aa-0.93□□□□□ -2.56
RNU6-48P-201ENST00000384161 SVBPQ8N300 66 aa-0.93□□□□□ -2.56
RNU6-48P-201ENST00000384161 A0A1B0GU69 56 aa-0.94□□□□□ -2.56
RNU6-48P-201ENST00000384161 H3BQ15 152 aa-0.94□□□□□ -2.56
RNU6-48P-201ENST00000384161 SFTA2Q6UW10 78 aa-0.94□□□□□ -2.56
RNU6-48P-201ENST00000384161 F8WEM9 126 aa-0.95□□□□□ -2.56
RNU6-48P-201ENST00000384161 GNG4P50150 75 aa-0.95□□□□□ -2.56
RNU6-48P-201ENST00000384161 RPL13AP3Q6NVV1 102 aa-0.95□□□□□ -2.56
RNU6-48P-201ENST00000384161 CLPSL2Q6UWE3 100 aa-0.95□□□□□ -2.56
RNU6-48P-201ENST00000384161 COX14Q96I36 57 aa-0.95□□□□□ -2.56
RNU6-48P-201ENST00000384161 CRYM-AS1A6NIL9 109 aa-0.96□□□□□ -2.56
RNU6-48P-201ENST00000384161 A8MTW9 85 aa-0.96□□□□□ -2.56
RNU6-48P-201ENST00000384161 I3L3M4 83 aa-0.96□□□□□ -2.56
RNU6-48P-201ENST00000384161 KRTDAPP60985 99 aa-0.96□□□□□ -2.56
RNU6-48P-201ENST00000384161 C9orf62Q8N4C0 152 aa-0.96□□□□□ -2.56
RNU6-48P-201ENST00000384161 SPTY2D1-AS1A0A0U1RR47 76 aa-0.97□□□□□ -2.56
RNU6-48P-201ENST00000384161 PPP3R1P63098 170 aa-0.97□□□□□ -2.56
RNU6-48P-201ENST00000384161 H1FX-AS1Q4G0G2 97 aa-0.97□□□□□ -2.56
RNU6-48P-201ENST00000384161 CGREF1Q99674 301 aa-0.97□□□□□ -2.56
RNU6-48P-201ENST00000384161 EFCAB10A6NFE3 127 aa-0.98□□□□□ -2.57
RNU6-48P-201ENST00000384161 H3BQF6 201 aa-0.98□□□□□ -2.57
RNU6-48P-201ENST00000384161 C6orf201Q7Z4U5 140 aa-0.98□□□□□ -2.57
RNU6-48P-201ENST00000384161 VAMP8Q9BV40 100 aa-0.98□□□□□ -2.57
RNU6-48P-201ENST00000384161 A0A087WVE0 104 aa-0.99□□□□□ -2.57
RNU6-48P-201ENST00000384161 APELAP0DMC3 54 aa-0.99□□□□□ -2.57
RNU6-48P-201ENST00000384161 SNCAP37840 140 aa-0.99□□□□□ -2.57
RNU6-48P-201ENST00000384161 DLEU1O43261 78 aa-1□□□□□ -2.57
RNU6-48P-201ENST00000384161 PRLHP81277 87 aa-1□□□□□ -2.57
RNU6-48P-201ENST00000384161 WFDC10BQ8IUB3 73 aa-1□□□□□ -2.57
RNU6-48P-201ENST00000384161 LEAP2Q969E1 77 aa-1□□□□□ -2.57
RNU6-48P-201ENST00000384161 LINC01546A6NGU7 62 aa-1.01□□□□□ -2.57
RNU6-48P-201ENST00000384161 TMEM262E9PQX1 116 aa-1.01□□□□□ -2.57
RNU6-48P-201ENST00000384161 H3BNG1 76 aa-1.01□□□□□ -2.57
RNU6-48P-201ENST00000384161 CORTO00230 105 aa-1.01□□□□□ -2.57
RNU6-48P-201ENST00000384161 HTN1P15515 57 aa-1.01□□□□□ -2.57
RNU6-48P-201ENST00000384161 DEFB110Q30KQ9 67 aa-1.01□□□□□ -2.57
RNU6-48P-201ENST00000384161 UQCRHLA0A096LP55 91 aa-1.02□□□□□ -2.57
RNU6-48P-201ENST00000384161 A0A0G2JND7 137 aa-1.02□□□□□ -2.57
RNU6-48P-201ENST00000384161 C7orf77A4D0Y5 90 aa-1.02□□□□□ -2.57
RNU6-48P-201ENST00000384161 H0Y9P7 68 aa-1.02□□□□□ -2.57
RNU6-48P-201ENST00000384161 A0A096LNI7 61 aa-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms