RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PRLHP81277 87 aa5.64□□□□□ -1.51
PTPRA-204ENST00000380393 ALMS1Q8TCU4 4167 aa5.64□□□□□ -1.51
PTPRA-204ENST00000380393 HUWE1Q7Z6Z7 4374 aaKnown RBP5.64□□□□□ -1.51
PTPRA-204ENST00000380393 K7EIL1 84 aa5.63□□□□□ -1.51
PTPRA-204ENST00000380393 DMAC1Q96GE9 116 aa5.63□□□□□ -1.51
PTPRA-204ENST00000380393 LYSTQ99698 3801 aa5.63□□□□□ -1.51
PTPRA-204ENST00000380393 CRIPTQ9P021 101 aa5.62□□□□□ -1.51
PTPRA-204ENST00000380393 C8orf17Q9NRJ1 99 aa5.62□□□□□ -1.51
PTPRA-204ENST00000380393 C20orf166-AS1Q96NR2 134 aa5.62□□□□□ -1.51
PTPRA-204ENST00000380393 KRTAP26-1Q6PEX3 210 aa5.61□□□□□ -1.51
PTPRA-204ENST00000380393 FBN3Q75N90 2809 aa5.61□□□□□ -1.51
PTPRA-204ENST00000380393 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
PTPRA-204ENST00000380393 CASC10Q5T4H9 136 aa5.6□□□□□ -1.51
PTPRA-204ENST00000380393 DNAH9Q9NYC9 4486 aa5.6□□□□□ -1.51
PTPRA-204ENST00000380393 SRRM2Q9UQ35 2752 aaKnown RBP5.59□□□□□ -1.51
PTPRA-204ENST00000380393 IGLV7-43P04211 117 aa5.59□□□□□ -1.52
PTPRA-204ENST00000380393 LINC00304Q8N9R0 145 aa5.59□□□□□ -1.52
PTPRA-204ENST00000380393 MRPL34Q9BQ48 92 aaKnown RBP5.58□□□□□ -1.52
PTPRA-204ENST00000380393 PLA2G2DQ9UNK4 145 aa5.56□□□□□ -1.52
PTPRA-204ENST00000380393 SSBP3-AS1Q7Z2R9 100 aa5.56□□□□□ -1.52
PTPRA-204ENST00000380393 KRTAP7-1Q8IUC3 87 aa5.54□□□□□ -1.52
PTPRA-204ENST00000380393 CDK2AP2O75956 126 aa5.53□□□□□ -1.52
PTPRA-204ENST00000380393 Q5W150 140 aa5.53□□□□□ -1.52
PTPRA-204ENST00000380393 LINC01556Q5JQF7 62 aa5.52□□□□□ -1.53
PTPRA-204ENST00000380393 DNAH7Q8WXX0 4024 aa5.52□□□□□ -1.53
PTPRA-204ENST00000380393 A0A1B0GVX0 72 aa5.52□□□□□ -1.53
PTPRA-204ENST00000380393 NUPR2A6NF83 97 aa5.51□□□□□ -1.53
PTPRA-204ENST00000380393 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
PTPRA-204ENST00000380393 TLX1NBP0CAT3 122 aa5.5□□□□□ -1.53
PTPRA-204ENST00000380393 Q96NJ1 140 aa5.49□□□□□ -1.53
PTPRA-204ENST00000380393 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
PTPRA-204ENST00000380393 STARD9Q9P2P6 4700 aa5.48□□□□□ -1.53
PTPRA-204ENST00000380393 A0A087WTM6 91 aa5.48□□□□□ -1.53
PTPRA-204ENST00000380393 PLECQ15149 4684 aaKnown RBP5.48□□□□□ -1.53
PTPRA-204ENST00000380393 CHTF8P0CG12 524 aa5.47□□□□□ -1.53
PTPRA-204ENST00000380393 KRTAP11-1Q8IUC1 163 aa5.45□□□□□ -1.54
PTPRA-204ENST00000380393 H0YAA0 97 aa5.45□□□□□ -1.54
PTPRA-204ENST00000380393 KRTAP13-3Q3SY46 172 aa5.45□□□□□ -1.54
PTPRA-204ENST00000380393 H3BNG1 76 aa5.44□□□□□ -1.54
PTPRA-204ENST00000380393 DNAH10Q8IVF4 4471 aa5.43□□□□□ -1.54
PTPRA-204ENST00000380393 K7ERS5 55 aa5.43□□□□□ -1.54
PTPRA-204ENST00000380393 SPINK1P00995 79 aa5.42□□□□□ -1.54
PTPRA-204ENST00000380393 SPRR1BP22528 89 aa5.42□□□□□ -1.54
PTPRA-204ENST00000380393 PSORS1C2Q9UIG4 136 aa5.42□□□□□ -1.54
PTPRA-204ENST00000380393 LY6G6CO95867 125 aa5.42□□□□□ -1.54
PTPRA-204ENST00000380393 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
PTPRA-204ENST00000380393 SPINK6Q6UWN8 80 aa5.42□□□□□ -1.54
PTPRA-204ENST00000380393 KMT2AQ03164 3969 aa5.41□□□□□ -1.54
PTPRA-204ENST00000380393 Q6ZSA8 131 aa5.4□□□□□ -1.55
PTPRA-204ENST00000380393 DNAH1Q9P2D7 4330 aa5.39□□□□□ -1.55
PTPRA-204ENST00000380393 PANO1I0J062 215 aa5.39□□□□□ -1.55
PTPRA-204ENST00000380393 KRTAP21-3Q3LHN1 58 aa5.39□□□□□ -1.55
PTPRA-204ENST00000380393 ANAPC11Q9NYG5 84 aa5.36□□□□□ -1.55
PTPRA-204ENST00000380393 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
PTPRA-204ENST00000380393 UBE2DNLQ8IWF7 75 aa5.34□□□□□ -1.56
PTPRA-204ENST00000380393 HYDINQ4G0P3 5121 aa5.33□□□□□ -1.56
PTPRA-204ENST00000380393 DYNC2H1Q8NCM8 4307 aaKnown RBP5.33□□□□□ -1.56
PTPRA-204ENST00000380393 A0A1B0GU33 70 aa5.33□□□□□ -1.56
PTPRA-204ENST00000380393 FAM229AH3BQW9 127 aa5.32□□□□□ -1.56
PTPRA-204ENST00000380393 SEC61BP60468 96 aaKnown RBP5.32□□□□□ -1.56
PTPRA-204ENST00000380393 KRTAP1-5Q9BYS1 174 aa5.31□□□□□ -1.56
PTPRA-204ENST00000380393 TPRXLQ17RH7 258 aa5.31□□□□□ -1.56
PTPRA-204ENST00000380393 APLNQ9ULZ1 77 aa5.31□□□□□ -1.56
PTPRA-204ENST00000380393 VPS13DQ5THJ4 4388 aa5.31□□□□□ -1.56
PTPRA-204ENST00000380393 IGKV2D-30A0A075B6S6 120 aa5.3□□□□□ -1.56
PTPRA-204ENST00000380393 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.3□□□□□ -1.56
PTPRA-204ENST00000380393 NBDYA0A0U1RRE5 68 aa5.29□□□□□ -1.56
PTPRA-204ENST00000380393 DNAH2Q9P225 4427 aa5.28□□□□□ -1.56
PTPRA-204ENST00000380393 J3QL48 77 aa5.28□□□□□ -1.56
PTPRA-204ENST00000380393 KMT2CQ8NEZ4 4911 aaKnown RBP5.26□□□□□ -1.57
PTPRA-204ENST00000380393 FRAS1Q86XX4 4008 aa5.26□□□□□ -1.57
PTPRA-204ENST00000380393 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
PTPRA-204ENST00000380393 C10orf95Q9H7T3 257 aa5.26□□□□□ -1.57
PTPRA-204ENST00000380393 C14orf177Q52M58 125 aa5.25□□□□□ -1.57
PTPRA-204ENST00000380393 TYMSOSQ8TAI1 123 aa5.25□□□□□ -1.57
PTPRA-204ENST00000380393 CIRBP-AS1Q8TBR5 109 aa5.25□□□□□ -1.57
PTPRA-204ENST00000380393 DMBT1Q9UGM3 2413 aaPredicted RBP5.23□□□□□ -1.57
PTPRA-204ENST00000380393 Q8N1X5 172 aa5.22□□□□□ -1.57
PTPRA-204ENST00000380393 WWC2-AS2Q96NR7 200 aa5.22□□□□□ -1.57
PTPRA-204ENST00000380393 SACSQ9NZJ4 4579 aa5.2□□□□□ -1.58
PTPRA-204ENST00000380393 DNAH6Q9C0G6 4158 aa5.19□□□□□ -1.58
PTPRA-204ENST00000380393 HECTD4Q9Y4D8 3996 aa5.16□□□□□ -1.58
PTPRA-204ENST00000380393 KRTAP13-1Q8IUC0 172 aa5.16□□□□□ -1.58
PTPRA-204ENST00000380393 PKHD1P08F94 4074 aa5.14□□□□□ -1.59
PTPRA-204ENST00000380393 RYR3Q15413 4870 aa5.13□□□□□ -1.59
PTPRA-204ENST00000380393 Q6ZRN7 208 aaPredicted RBP5.12□□□□□ -1.59
PTPRA-204ENST00000380393 DNAH11Q96DT5 4516 aa5.12□□□□□ -1.59
PTPRA-204ENST00000380393 FAT2Q9NYQ8 4349 aa5.12□□□□□ -1.59
PTPRA-204ENST00000380393 DNAH17Q9UFH2 4485 aa5.12□□□□□ -1.59
PTPRA-204ENST00000380393 RPL37P61927 97 aaKnown RBP5.11□□□□□ -1.59
PTPRA-204ENST00000380393 COX6B2Q6YFQ2 88 aa5.11□□□□□ -1.59
PTPRA-204ENST00000380393 KRTAP3-3Q9BYR6 98 aa5.11□□□□□ -1.59
PTPRA-204ENST00000380393 KRTAP3-2Q9BYR7 98 aa5.11□□□□□ -1.59
PTPRA-204ENST00000380393 RYR2Q92736 4967 aa5.1□□□□□ -1.59
PTPRA-204ENST00000380393 SPACA4Q8TDM5 124 aa5.09□□□□□ -1.6
PTPRA-204ENST00000380393 DNAH5Q8TE73 4624 aa5.09□□□□□ -1.6
PTPRA-204ENST00000380393 LCE2DQ5TA82 110 aaPredicted RBP5.08□□□□□ -1.6
PTPRA-204ENST00000380393 PKD1P98161 4303 aa5.06□□□□□ -1.6
PTPRA-204ENST00000380393 KRTAP10-2P60368 255 aa5.06□□□□□ -1.6
PTPRA-204ENST00000380393 A0A0D9SG42 100 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms