RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 C14orf177Q52M58 125 aa5.4□□□□□ -1.54
THBS3-201ENST00000368378 C9orf163Q8N9P6 203 aa5.4□□□□□ -1.54
THBS3-201ENST00000368378 Q8N9P0 234 aaPredicted RBP5.39□□□□□ -1.55
THBS3-201ENST00000368378 IGLV8-61A0A075B6I0 122 aa5.38□□□□□ -1.55
THBS3-201ENST00000368378 PLA2G1BP04054 148 aaKnown RBP5.38□□□□□ -1.55
THBS3-201ENST00000368378 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
THBS3-201ENST00000368378 PSORS1C2Q9UIG4 136 aa5.38□□□□□ -1.55
THBS3-201ENST00000368378 ADM2Q7Z4H4 148 aa5.38□□□□□ -1.55
THBS3-201ENST00000368378 MMP24-AS1A0A0U1RRL7 71 aa5.37□□□□□ -1.55
THBS3-201ENST00000368378 COA5Q86WW8 74 aa5.37□□□□□ -1.55
THBS3-201ENST00000368378 KRTAP29-1A8MX34 341 aaPredicted RBP5.36□□□□□ -1.55
THBS3-201ENST00000368378 FAM229AH3BQW9 127 aa5.36□□□□□ -1.55
THBS3-201ENST00000368378 WWC2-AS2Q96NR7 200 aa5.36□□□□□ -1.55
THBS3-201ENST00000368378 LIMD2Q9BT23 127 aa5.36□□□□□ -1.55
THBS3-201ENST00000368378 RTL8CO15255 209 aa5.35□□□□□ -1.55
THBS3-201ENST00000368378 KMT2CQ8NEZ4 4911 aaKnown RBP5.34□□□□□ -1.55
THBS3-201ENST00000368378 NUPR2A6NF83 97 aa5.33□□□□□ -1.56
THBS3-201ENST00000368378 SPRR1BP22528 89 aa5.33□□□□□ -1.56
THBS3-201ENST00000368378 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
THBS3-201ENST00000368378 C8orf17Q9NRJ1 99 aa5.33□□□□□ -1.56
THBS3-201ENST00000368378 IGLV5-52A0A0A0MRZ9 124 aa5.32□□□□□ -1.56
THBS3-201ENST00000368378 A0A087WTM6 91 aa5.32□□□□□ -1.56
THBS3-201ENST00000368378 Q6ZRN7 208 aaPredicted RBP5.31□□□□□ -1.56
THBS3-201ENST00000368378 DNAH6Q9C0G6 4158 aa5.3□□□□□ -1.56
THBS3-201ENST00000368378 KRTAP13-1Q8IUC0 172 aa5.3□□□□□ -1.56
THBS3-201ENST00000368378 SPACA4Q8TDM5 124 aa5.3□□□□□ -1.56
THBS3-201ENST00000368378 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
THBS3-201ENST00000368378 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
THBS3-201ENST00000368378 SPINK7P58062 85 aa5.29□□□□□ -1.56
THBS3-201ENST00000368378 HYDINQ4G0P3 5121 aa5.29□□□□□ -1.56
THBS3-201ENST00000368378 Q5W150 140 aa5.28□□□□□ -1.56
THBS3-201ENST00000368378 Q96NJ1 140 aa5.28□□□□□ -1.56
THBS3-201ENST00000368378 DNAH11Q96DT5 4516 aa5.28□□□□□ -1.56
THBS3-201ENST00000368378 A0A1B0GVX0 72 aa5.28□□□□□ -1.56
THBS3-201ENST00000368378 C1orf134Q5TEV5 83 aa5.28□□□□□ -1.56
THBS3-201ENST00000368378 LOC101927531A0A1B0GV80 90 aa5.28□□□□□ -1.56
THBS3-201ENST00000368378 MRPL34Q9BQ48 92 aaKnown RBP5.27□□□□□ -1.57
THBS3-201ENST00000368378 DNAH2Q9P225 4427 aa5.27□□□□□ -1.57
THBS3-201ENST00000368378 SPINK1P00995 79 aa5.26□□□□□ -1.57
THBS3-201ENST00000368378 VPS13DQ5THJ4 4388 aa5.26□□□□□ -1.57
THBS3-201ENST00000368378 DMBT1Q9UGM3 2413 aaPredicted RBP5.25□□□□□ -1.57
THBS3-201ENST00000368378 IGKV2D-30A0A075B6S6 120 aa5.25□□□□□ -1.57
THBS3-201ENST00000368378 ZNF861PO60384 105 aa5.25□□□□□ -1.57
THBS3-201ENST00000368378 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
THBS3-201ENST00000368378 SPANXA2-OT1Q8N9U9 137 aa5.25□□□□□ -1.57
THBS3-201ENST00000368378 HECTD4Q9Y4D8 3996 aa5.24□□□□□ -1.57
THBS3-201ENST00000368378 HRES1P13985 223 aa5.24□□□□□ -1.57
THBS3-201ENST00000368378 DYNC2H1Q8NCM8 4307 aaKnown RBP5.24□□□□□ -1.57
THBS3-201ENST00000368378 H3BPC8 53 aa5.23□□□□□ -1.57
THBS3-201ENST00000368378 IGLV7-46A0A075B6I9 117 aa5.23□□□□□ -1.57
THBS3-201ENST00000368378 KRTAP10-2P60368 255 aa5.23□□□□□ -1.57
THBS3-201ENST00000368378 FLG2Q5D862 2391 aaPredicted RBP5.21□□□□□ -1.58
THBS3-201ENST00000368378 RYR3Q15413 4870 aa5.21□□□□□ -1.58
THBS3-201ENST00000368378 LINC00483Q53H64 154 aa5.21□□□□□ -1.58
THBS3-201ENST00000368378 KRTAP16-1A8MUX0 517 aa5.19□□□□□ -1.58
THBS3-201ENST00000368378 IGLV7-43P04211 117 aa5.19□□□□□ -1.58
THBS3-201ENST00000368378 TP53AIP1Q9HCN2 124 aa5.19□□□□□ -1.58
THBS3-201ENST00000368378 PLAC8Q9NZF1 115 aa5.18□□□□□ -1.58
THBS3-201ENST00000368378 LRP1BQ9NZR2 4599 aa5.18□□□□□ -1.58
THBS3-201ENST00000368378 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
THBS3-201ENST00000368378 ROMO1P60602 79 aa5.17□□□□□ -1.58
THBS3-201ENST00000368378 Q6ZR54 194 aa5.17□□□□□ -1.58
THBS3-201ENST00000368378 LINC01558Q9Y6Z2 57 aa5.17□□□□□ -1.58
THBS3-201ENST00000368378 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
THBS3-201ENST00000368378 SMR3BP02814 79 aaPredicted RBP5.17□□□□□ -1.58
THBS3-201ENST00000368378 SEC61BP60468 96 aaKnown RBP5.17□□□□□ -1.58
THBS3-201ENST00000368378 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
THBS3-201ENST00000368378 Q8N1X5 172 aa5.14□□□□□ -1.59
THBS3-201ENST00000368378 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
THBS3-201ENST00000368378 KRTAP10-1P60331 282 aa5.11□□□□□ -1.59
THBS3-201ENST00000368378 FAT2Q9NYQ8 4349 aa5.11□□□□□ -1.59
THBS3-201ENST00000368378 A0A1B0GU69 56 aa5.1□□□□□ -1.59
THBS3-201ENST00000368378 ACYP2P14621 99 aa5.1□□□□□ -1.59
THBS3-201ENST00000368378 KRTAP13-2Q52LG2 175 aa5.1□□□□□ -1.59
THBS3-201ENST00000368378 DNAH5Q8TE73 4624 aa5.1□□□□□ -1.59
THBS3-201ENST00000368378 RYR2Q92736 4967 aa5.1□□□□□ -1.59
THBS3-201ENST00000368378 ALMS1Q8TCU4 4167 aa5.09□□□□□ -1.59
THBS3-201ENST00000368378 PKHD1P08F94 4074 aa5.09□□□□□ -1.59
THBS3-201ENST00000368378 VPS13BQ7Z7G8 4022 aa5.09□□□□□ -1.59
THBS3-201ENST00000368378 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
THBS3-201ENST00000368378 P0C880 135 aa5.08□□□□□ -1.6
THBS3-201ENST00000368378 FAT1Q14517 4588 aa5.07□□□□□ -1.6
THBS3-201ENST00000368378 EPPK1P58107 5090 aaKnown RBP5.07□□□□□ -1.6
THBS3-201ENST00000368378 TYMSOSQ8TAI1 123 aa5.06□□□□□ -1.6
THBS3-201ENST00000368378 SSBP3-AS1Q7Z2R9 100 aa5.06□□□□□ -1.6
THBS3-201ENST00000368378 KRTAP13-3Q3SY46 172 aa5.03□□□□□ -1.6
THBS3-201ENST00000368378 LUZP6Q538Z0 58 aa5.03□□□□□ -1.6
THBS3-201ENST00000368378 KIAA1109Q2LD37 5005 aa5□□□□□ -1.61
THBS3-201ENST00000368378 MYCBP2O75592 4640 aa4.98□□□□□ -1.61
THBS3-201ENST00000368378 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
THBS3-201ENST00000368378 DMAC1Q96GE9 116 aa4.98□□□□□ -1.61
THBS3-201ENST00000368378 CRIPTQ9P021 101 aa4.97□□□□□ -1.61
THBS3-201ENST00000368378 KRTAP1-4P0C5Y4 121 aa4.95□□□□□ -1.62
THBS3-201ENST00000368378 PKD1P98161 4303 aa4.95□□□□□ -1.62
THBS3-201ENST00000368378 DYNC1H1Q14204 4646 aaKnown RBP4.95□□□□□ -1.62
THBS3-201ENST00000368378 UQCR11O14957 56 aa4.94□□□□□ -1.62
THBS3-201ENST00000368378 SPATA8Q6RVD6 105 aa4.94□□□□□ -1.62
THBS3-201ENST00000368378 Q6ZSA8 131 aa4.93□□□□□ -1.62
THBS3-201ENST00000368378 LINC00304Q8N9R0 145 aa4.93□□□□□ -1.62
THBS3-201ENST00000368378 C20orf166-AS1Q96NR2 134 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms