RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 DYNC2H1Q8NCM8 4307 aaKnown RBP10.22□□□□□ -0.77
CDK11B-201ENST00000340677 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
CDK11B-201ENST00000340677 UBE2DNLQ8IWF7 75 aa10.2□□□□□ -0.78
CDK11B-201ENST00000340677 C15orf56Q8N910 161 aa10.19□□□□□ -0.78
CDK11B-201ENST00000340677 PRKDCP78527 4128 aaKnown RBP10.19□□□□□ -0.78
CDK11B-201ENST00000340677 CAMK2N2Q96S95 79 aa10.14□□□□□ -0.79
CDK11B-201ENST00000340677 SPINT4Q6UDR6 99 aa10.13□□□□□ -0.79
CDK11B-201ENST00000340677 DMAC1Q96GE9 116 aa10.12□□□□□ -0.79
CDK11B-201ENST00000340677 A0A087WTM6 91 aa10.11□□□□□ -0.79
CDK11B-201ENST00000340677 K7ERS5 55 aa10.11□□□□□ -0.79
CDK11B-201ENST00000340677 LINC00304Q8N9R0 145 aa10.11□□□□□ -0.79
CDK11B-201ENST00000340677 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.11□□□□□ -0.79
CDK11B-201ENST00000340677 KRTAP15-1Q3LI76 137 aa10.1□□□□□ -0.79
CDK11B-201ENST00000340677 KRTAP1-5Q9BYS1 174 aa10.1□□□□□ -0.79
CDK11B-201ENST00000340677 DNAH7Q8WXX0 4024 aa10.09□□□□□ -0.79
CDK11B-201ENST00000340677 TLX1NBP0CAT3 122 aa10.09□□□□□ -0.79
CDK11B-201ENST00000340677 Q5W150 140 aa10.09□□□□□ -0.79
CDK11B-201ENST00000340677 A0A0G2JQZ4 141 aa10.08□□□□□ -0.8
CDK11B-201ENST00000340677 NBDYA0A0U1RRE5 68 aa10.08□□□□□ -0.8
CDK11B-201ENST00000340677 A0A1W2PNN7 141 aa10.08□□□□□ -0.8
CDK11B-201ENST00000340677 CRIPTQ9P021 101 aa10.08□□□□□ -0.8
CDK11B-201ENST00000340677 FAM168BA1KXE4 195 aa10.08□□□□□ -0.8
CDK11B-201ENST00000340677 WWC2-AS2Q96NR7 200 aa10.06□□□□□ -0.8
CDK11B-201ENST00000340677 ACYP2P14621 99 aa10.05□□□□□ -0.8
CDK11B-201ENST00000340677 C14orf177Q52M58 125 aa10.04□□□□□ -0.8
CDK11B-201ENST00000340677 MMP24-AS1A0A0U1RRL7 71 aa10.04□□□□□ -0.8
CDK11B-201ENST00000340677 DNAH1Q9P2D7 4330 aa10.03□□□□□ -0.8
CDK11B-201ENST00000340677 TP53AIP1Q9HCN2 124 aa10.02□□□□□ -0.8
CDK11B-201ENST00000340677 KRTAP4-16G5E9R7 235 aaPredicted RBP10.01□□□□□ -0.81
CDK11B-201ENST00000340677 CSMD3Q7Z407 3707 aa10□□□□□ -0.81
CDK11B-201ENST00000340677 RPL37AP8A6NKH3 93 aa10□□□□□ -0.81
CDK11B-201ENST00000340677 IGLV7-43P04211 117 aa10□□□□□ -0.81
CDK11B-201ENST00000340677 Q6ZRN7 208 aaPredicted RBP9.99□□□□□ -0.81
CDK11B-201ENST00000340677 DHRS4-AS1Q9P1J3 65 aa9.98□□□□□ -0.81
CDK11B-201ENST00000340677 IGFL1Q6UW32 110 aa9.98□□□□□ -0.81
CDK11B-201ENST00000340677 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
CDK11B-201ENST00000340677 PLECQ15149 4684 aaKnown RBP9.96□□□□□ -0.81
CDK11B-201ENST00000340677 VPS13DQ5THJ4 4388 aa9.96□□□□□ -0.82
CDK11B-201ENST00000340677 IGLV8-61A0A075B6I0 122 aa9.95□□□□□ -0.82
CDK11B-201ENST00000340677 CIRBP-AS1Q8TBR5 109 aa9.95□□□□□ -0.82
CDK11B-201ENST00000340677 STARD9Q9P2P6 4700 aa9.95□□□□□ -0.82
CDK11B-201ENST00000340677 SSBP3-AS1Q7Z2R9 100 aa9.94□□□□□ -0.82
CDK11B-201ENST00000340677 Q6ZRX8 168 aa9.92□□□□□ -0.82
CDK11B-201ENST00000340677 KMT2CQ8NEZ4 4911 aaKnown RBP9.91□□□□□ -0.82
CDK11B-201ENST00000340677 Q96NJ1 140 aa9.9□□□□□ -0.82
CDK11B-201ENST00000340677 TENM2Q9NT68 2774 aa9.89□□□□□ -0.83
CDK11B-201ENST00000340677 DNAH6Q9C0G6 4158 aa9.87□□□□□ -0.83
CDK11B-201ENST00000340677 KRTAP11-1Q8IUC1 163 aa9.86□□□□□ -0.83
CDK11B-201ENST00000340677 RYR3Q15413 4870 aa9.85□□□□□ -0.83
CDK11B-201ENST00000340677 LY6G6CO95867 125 aa9.84□□□□□ -0.83
CDK11B-201ENST00000340677 LYSTQ99698 3801 aa9.84□□□□□ -0.83
CDK11B-201ENST00000340677 KRTAP7-1Q8IUC3 87 aa9.81□□□□□ -0.84
CDK11B-201ENST00000340677 A0A096LNI7 61 aa9.8□□□□□ -0.84
CDK11B-201ENST00000340677 SPRR1AP35321 89 aa9.76□□□□□ -0.85
CDK11B-201ENST00000340677 DNAH10Q8IVF4 4471 aa9.75□□□□□ -0.85
CDK11B-201ENST00000340677 H0YAA0 97 aa9.75□□□□□ -0.85
CDK11B-201ENST00000340677 PSORS1C2Q9UIG4 136 aa9.74□□□□□ -0.85
CDK11B-201ENST00000340677 BIRC6Q9NR09 4857 aa9.69□□□□□ -0.86
CDK11B-201ENST00000340677 PRLHP81277 87 aa9.69□□□□□ -0.86
CDK11B-201ENST00000340677 SPACA4Q8TDM5 124 aa9.69□□□□□ -0.86
CDK11B-201ENST00000340677 A0A1B0GVX0 72 aa9.67□□□□□ -0.86
CDK11B-201ENST00000340677 KMT2AQ03164 3969 aa9.66□□□□□ -0.86
CDK11B-201ENST00000340677 PANO1I0J062 215 aa9.65□□□□□ -0.86
CDK11B-201ENST00000340677 TPRXLQ17RH7 258 aa9.65□□□□□ -0.86
CDK11B-201ENST00000340677 DNAH2Q9P225 4427 aa9.65□□□□□ -0.86
CDK11B-201ENST00000340677 DNAH17Q9UFH2 4485 aa9.64□□□□□ -0.87
CDK11B-201ENST00000340677 RYR2Q92736 4967 aa9.62□□□□□ -0.87
CDK11B-201ENST00000340677 MRPL34Q9BQ48 92 aaKnown RBP9.62□□□□□ -0.87
CDK11B-201ENST00000340677 Q6ZSA8 131 aa9.61□□□□□ -0.87
CDK11B-201ENST00000340677 KRTAP13-3Q3SY46 172 aa9.6□□□□□ -0.87
CDK11B-201ENST00000340677 SRRM2Q9UQ35 2752 aaKnown RBP9.57□□□□□ -0.88
CDK11B-201ENST00000340677 FRAS1Q86XX4 4008 aa9.55□□□□□ -0.88
CDK11B-201ENST00000340677 HECTD4Q9Y4D8 3996 aa9.55□□□□□ -0.88
CDK11B-201ENST00000340677 KRTAP17-1Q9BYP8 105 aa9.55□□□□□ -0.88
CDK11B-201ENST00000340677 KRTAP10-2P60368 255 aa9.54□□□□□ -0.88
CDK11B-201ENST00000340677 EPPK1P58107 5090 aaKnown RBP9.52□□□□□ -0.89
CDK11B-201ENST00000340677 SACSQ9NZJ4 4579 aa9.52□□□□□ -0.89
CDK11B-201ENST00000340677 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
CDK11B-201ENST00000340677 HYDINQ4G0P3 5121 aa9.46□□□□□ -0.9
CDK11B-201ENST00000340677 SPRR1BP22528 89 aa9.45□□□□□ -0.9
CDK11B-201ENST00000340677 DNAH11Q96DT5 4516 aa9.45□□□□□ -0.9
CDK11B-201ENST00000340677 KRTAP10-1P60331 282 aa9.44□□□□□ -0.9
CDK11B-201ENST00000340677 C10orf95Q9H7T3 257 aa9.43□□□□□ -0.9
CDK11B-201ENST00000340677 FAT2Q9NYQ8 4349 aa9.41□□□□□ -0.9
CDK11B-201ENST00000340677 DNAH8Q96JB1 4490 aa9.4□□□□□ -0.9
CDK11B-201ENST00000340677 A0A1B0GVY2 172 aa9.4□□□□□ -0.91
CDK11B-201ENST00000340677 PKD1P98161 4303 aa9.39□□□□□ -0.91
CDK11B-201ENST00000340677 DNAH5Q8TE73 4624 aa9.38□□□□□ -0.91
CDK11B-201ENST00000340677 A0A1B0GU33 70 aa9.36□□□□□ -0.91
CDK11B-201ENST00000340677 CAMK2N1Q7Z7J9 78 aa9.33□□□□□ -0.92
CDK11B-201ENST00000340677 SPINK1P00995 79 aa9.31□□□□□ -0.92
CDK11B-201ENST00000340677 ANAPC11Q9NYG5 84 aa9.31□□□□□ -0.92
CDK11B-201ENST00000340677 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
CDK11B-201ENST00000340677 IGKV2-30P06310 120 aa9.26□□□□□ -0.93
CDK11B-201ENST00000340677 HERC2O95714 4834 aa9.26□□□□□ -0.93
CDK11B-201ENST00000340677 TYMSOSQ8TAI1 123 aa9.24□□□□□ -0.93
CDK11B-201ENST00000340677 IGKV2D-30A0A075B6S6 120 aa9.15□□□□□ -0.94
CDK11B-201ENST00000340677 DYNC1H1Q14204 4646 aaKnown RBP9.14□□□□□ -0.95
CDK11B-201ENST00000340677 LRP1BQ9NZR2 4599 aa9.13□□□□□ -0.95
CDK11B-201ENST00000340677 FAM229AH3BQW9 127 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms