RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 KRTAP4-16G5E9R7 235 aaPredicted RBP6.75□□□□□ -1.33
ACTC1-201ENST00000290378 MIR22HGQ0VDD5 57 aa6.75□□□□□ -1.33
ACTC1-201ENST00000290378 KRTAP7-1Q8IUC3 87 aa6.74□□□□□ -1.33
ACTC1-201ENST00000290378 PLA2G2DQ9UNK4 145 aa6.74□□□□□ -1.33
ACTC1-201ENST00000290378 AKAP9Q99996 3911 aa6.73□□□□□ -1.33
ACTC1-201ENST00000290378 KRTAP29-1A8MX34 341 aaPredicted RBP6.72□□□□□ -1.33
ACTC1-201ENST00000290378 LINC00472Q9H8W2 130 aa6.72□□□□□ -1.33
ACTC1-201ENST00000290378 CSMD3Q7Z407 3707 aa6.72□□□□□ -1.33
ACTC1-201ENST00000290378 A0A1B0GVX0 72 aa6.72□□□□□ -1.33
ACTC1-201ENST00000290378 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.33
ACTC1-201ENST00000290378 UQCR11O14957 56 aa6.7□□□□□ -1.34
ACTC1-201ENST00000290378 PANO1I0J062 215 aa6.7□□□□□ -1.34
ACTC1-201ENST00000290378 PSORS1C2Q9UIG4 136 aa6.69□□□□□ -1.34
ACTC1-201ENST00000290378 CRIPTQ9P021 101 aa6.69□□□□□ -1.34
ACTC1-201ENST00000290378 KRTAP11-1Q8IUC1 163 aa6.69□□□□□ -1.34
ACTC1-201ENST00000290378 IGLV5-37A0A075B6J1 123 aa6.68□□□□□ -1.34
ACTC1-201ENST00000290378 A0A087X002 238 aa6.68□□□□□ -1.34
ACTC1-201ENST00000290378 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
ACTC1-201ENST00000290378 SPACA4Q8TDM5 124 aa6.67□□□□□ -1.34
ACTC1-201ENST00000290378 SSBP3-AS1Q7Z2R9 100 aa6.61□□□□□ -1.35
ACTC1-201ENST00000290378 Q8N1X5 172 aa6.61□□□□□ -1.35
ACTC1-201ENST00000290378 ZNF861PO60384 105 aa6.6□□□□□ -1.35
ACTC1-201ENST00000290378 Q5W150 140 aa6.59□□□□□ -1.35
ACTC1-201ENST00000290378 KRTAP10-2P60368 255 aa6.59□□□□□ -1.35
ACTC1-201ENST00000290378 PLA2G1BP04054 148 aaKnown RBP6.57□□□□□ -1.36
ACTC1-201ENST00000290378 IGLV7-43P04211 117 aa6.55□□□□□ -1.36
ACTC1-201ENST00000290378 K7ERS5 55 aa6.55□□□□□ -1.36
ACTC1-201ENST00000290378 SPINT4Q6UDR6 99 aa6.54□□□□□ -1.36
ACTC1-201ENST00000290378 Q6ZR54 194 aa6.54□□□□□ -1.36
ACTC1-201ENST00000290378 FAM229AH3BQW9 127 aa6.54□□□□□ -1.36
ACTC1-201ENST00000290378 TYMSOSQ8TAI1 123 aa6.53□□□□□ -1.36
ACTC1-201ENST00000290378 Q96NJ1 140 aa6.52□□□□□ -1.36
ACTC1-201ENST00000290378 FBN3Q75N90 2809 aa6.52□□□□□ -1.36
ACTC1-201ENST00000290378 Q6ZRN7 208 aaPredicted RBP6.52□□□□□ -1.37
ACTC1-201ENST00000290378 KRTAP10-1P60331 282 aa6.5□□□□□ -1.37
ACTC1-201ENST00000290378 SPRR1BP22528 89 aa6.48□□□□□ -1.37
ACTC1-201ENST00000290378 PLAC8Q9NZF1 115 aa6.46□□□□□ -1.38
ACTC1-201ENST00000290378 SPATA8Q6RVD6 105 aa6.44□□□□□ -1.38
ACTC1-201ENST00000290378 MEGF8Q7Z7M0 2845 aa6.42□□□□□ -1.38
ACTC1-201ENST00000290378 C9orf92A6NGG3 77 aa6.41□□□□□ -1.38
ACTC1-201ENST00000290378 A0A0D9SG42 100 aa6.4□□□□□ -1.38
ACTC1-201ENST00000290378 DMAC1Q96GE9 116 aa6.38□□□□□ -1.39
ACTC1-201ENST00000290378 LINC00304Q8N9R0 145 aa6.36□□□□□ -1.39
ACTC1-201ENST00000290378 ROMO1P60602 79 aa6.33□□□□□ -1.4
ACTC1-201ENST00000290378 A0A1B0GU33 70 aa6.32□□□□□ -1.4
ACTC1-201ENST00000290378 KRTAP25-1Q3LHN0 102 aa6.3□□□□□ -1.4
ACTC1-201ENST00000290378 HUWE1Q7Z6Z7 4374 aaKnown RBP6.27□□□□□ -1.41
ACTC1-201ENST00000290378 KRTAP13-1Q8IUC0 172 aa6.27□□□□□ -1.41
ACTC1-201ENST00000290378 ASB16-AS1Q495Z4 193 aa6.27□□□□□ -1.41
ACTC1-201ENST00000290378 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
ACTC1-201ENST00000290378 A8MUU9 505 aa6.24□□□□□ -1.41
ACTC1-201ENST00000290378 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
ACTC1-201ENST00000290378 DNHD1Q96M86 4753 aa6.21□□□□□ -1.41
ACTC1-201ENST00000290378 ANK2Q01484 3957 aa6.2□□□□□ -1.42
ACTC1-201ENST00000290378 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
ACTC1-201ENST00000290378 KRTAP21-3Q3LHN1 58 aa6.18□□□□□ -1.42
ACTC1-201ENST00000290378 Q5VSD8 79 aa6.17□□□□□ -1.42
ACTC1-201ENST00000290378 Q6ZSA8 131 aa6.15□□□□□ -1.43
ACTC1-201ENST00000290378 J3QL48 77 aa6.13□□□□□ -1.43
ACTC1-201ENST00000290378 H0YAA0 97 aa6.13□□□□□ -1.43
ACTC1-201ENST00000290378 DNAH9Q9NYC9 4486 aa6.12□□□□□ -1.43
ACTC1-201ENST00000290378 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
ACTC1-201ENST00000290378 DNAH10Q8IVF4 4471 aa6.11□□□□□ -1.43
ACTC1-201ENST00000290378 C10orf95Q9H7T3 257 aa6.1□□□□□ -1.43
ACTC1-201ENST00000290378 PLECQ15149 4684 aaKnown RBP6.09□□□□□ -1.43
ACTC1-201ENST00000290378 KRTAP13-3Q3SY46 172 aa6.08□□□□□ -1.44
ACTC1-201ENST00000290378 PRKDCP78527 4128 aaKnown RBP6.07□□□□□ -1.44
ACTC1-201ENST00000290378 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
ACTC1-201ENST00000290378 KRTAP1-4P0C5Y4 121 aa6.03□□□□□ -1.44
ACTC1-201ENST00000290378 P0C880 135 aa6.03□□□□□ -1.44
ACTC1-201ENST00000290378 A0A0A0MQY5 61 aa6.03□□□□□ -1.44
ACTC1-201ENST00000290378 LYSTQ99698 3801 aa6.02□□□□□ -1.45
ACTC1-201ENST00000290378 RPL37P61927 97 aaKnown RBP6.01□□□□□ -1.45
ACTC1-201ENST00000290378 STARD9Q9P2P6 4700 aa6.01□□□□□ -1.45
ACTC1-201ENST00000290378 COX6B2Q6YFQ2 88 aa6□□□□□ -1.45
ACTC1-201ENST00000290378 C20orf166-AS1Q96NR2 134 aa5.99□□□□□ -1.45
ACTC1-201ENST00000290378 KMT2AQ03164 3969 aa5.91□□□□□ -1.46
ACTC1-201ENST00000290378 DNAH11Q96DT5 4516 aa5.9□□□□□ -1.46
ACTC1-201ENST00000290378 CMYA5Q8N3K9 4069 aa5.9□□□□□ -1.46
ACTC1-201ENST00000290378 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
ACTC1-201ENST00000290378 DNAH1Q9P2D7 4330 aa5.89□□□□□ -1.47
ACTC1-201ENST00000290378 A0A1B0GVY2 172 aa5.87□□□□□ -1.47
ACTC1-201ENST00000290378 TPRXLQ17RH7 258 aa5.84□□□□□ -1.47
ACTC1-201ENST00000290378 DNAH7Q8WXX0 4024 aa5.84□□□□□ -1.48
ACTC1-201ENST00000290378 S4R3F8 94 aa5.83□□□□□ -1.48
ACTC1-201ENST00000290378 DNAH3Q8TD57 4116 aa5.79□□□□□ -1.48
ACTC1-201ENST00000290378 DNAH5Q8TE73 4624 aa5.78□□□□□ -1.48
ACTC1-201ENST00000290378 VPS13DQ5THJ4 4388 aa5.77□□□□□ -1.49
ACTC1-201ENST00000290378 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
ACTC1-201ENST00000290378 FAT1Q14517 4588 aa5.76□□□□□ -1.49
ACTC1-201ENST00000290378 RPS29P62273 56 aaKnown RBP5.75□□□□□ -1.49
ACTC1-201ENST00000290378 FRAS1Q86XX4 4008 aa5.73□□□□□ -1.49
ACTC1-201ENST00000290378 LRP1BQ9NZR2 4599 aa5.71□□□□□ -1.5
ACTC1-201ENST00000290378 M0QZ58 72 aa5.68□□□□□ -1.5
ACTC1-201ENST00000290378 KRTAP13-4Q3LI77 160 aa5.68□□□□□ -1.5
ACTC1-201ENST00000290378 DNAH8Q96JB1 4490 aa5.68□□□□□ -1.5
ACTC1-201ENST00000290378 R4GN34 69 aa5.68□□□□□ -1.5
ACTC1-201ENST00000290378 XP32Q5T750 250 aa5.66□□□□□ -1.5
ACTC1-201ENST00000290378 HYDINQ4G0P3 5121 aa5.66□□□□□ -1.5
ACTC1-201ENST00000290378 DNAH6Q9C0G6 4158 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms