RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 PANO1I0J062 215 aa3.76□□□□□ -1.81
ATM-229ENST00000639953 COPS9Q8WXC6 57 aa3.76□□□□□ -1.81
ATM-229ENST00000639953 C14orf132Q9NPU4 83 aa3.76□□□□□ -1.81
ATM-229ENST00000639953 SMR3BP02814 79 aaPredicted RBP3.75□□□□□ -1.81
ATM-229ENST00000639953 TMEM126AQ9H061 195 aa3.75□□□□□ -1.81
ATM-229ENST00000639953 RPL37AP8A6NKH3 93 aa3.74□□□□□ -1.81
ATM-229ENST00000639953 KRTAP4-16G5E9R7 235 aaPredicted RBP3.74□□□□□ -1.81
ATM-229ENST00000639953 M0R378 163 aa3.74□□□□□ -1.81
ATM-229ENST00000639953 ERC2-IT1O76042 136 aa3.74□□□□□ -1.81
ATM-229ENST00000639953 TLX1NBP0CAT3 122 aa3.74□□□□□ -1.81
ATM-229ENST00000639953 CHTF8P0CG12 524 aa3.74□□□□□ -1.81
ATM-229ENST00000639953 CNBPP62633 177 aaKnown RBP3.74□□□□□ -1.81
ATM-229ENST00000639953 GAGE2BQ13066 116 aa3.74□□□□□ -1.81
ATM-229ENST00000639953 S100A7L2Q5SY68 101 aa3.74□□□□□ -1.81
ATM-229ENST00000639953 SDIM1Q6ZPB5 146 aa3.74□□□□□ -1.81
ATM-229ENST00000639953 Q6ZSA8 131 aa3.74□□□□□ -1.81
ATM-229ENST00000639953 C9orf163Q8N9P6 203 aa3.74□□□□□ -1.81
ATM-229ENST00000639953 FAT1Q14517 4588 aa3.74□□□□□ -1.81
ATM-229ENST00000639953 TRAV23DV6A0A075B6W5 121 aa3.73□□□□□ -1.81
ATM-229ENST00000639953 A0A096LNI7 61 aa3.73□□□□□ -1.81
ATM-229ENST00000639953 SEC61BP60468 96 aaKnown RBP3.73□□□□□ -1.81
ATM-229ENST00000639953 PKHD1L1Q86WI1 4243 aa3.72□□□□□ -1.81
ATM-229ENST00000639953 hADV29S1A0JD25 119 aa3.72□□□□□ -1.81
ATM-229ENST00000639953 J3QR89 54 aa3.72□□□□□ -1.81
ATM-229ENST00000639953 ZNF73O43830 326 aaPredicted RBP3.72□□□□□ -1.81
ATM-229ENST00000639953 COX7BP24311 80 aa3.72□□□□□ -1.81
ATM-229ENST00000639953 ELOF1P60002 83 aaKnown RBP3.72□□□□□ -1.81
ATM-229ENST00000639953 SCXQ7RTU7 201 aa3.72□□□□□ -1.81
ATM-229ENST00000639953 ST20-AS1Q8NBB2 130 aa3.72□□□□□ -1.81
ATM-229ENST00000639953 Q9BRP9 147 aa3.72□□□□□ -1.81
ATM-229ENST00000639953 LINC00846Q9NV44 126 aa3.72□□□□□ -1.81
ATM-229ENST00000639953 ORMDL1Q9P0S3 153 aa3.72□□□□□ -1.81
ATM-229ENST00000639953 IGLV1-50A0A075B6I6 118 aa3.71□□□□□ -1.82
ATM-229ENST00000639953 A0A0G2JQZ4 141 aa3.71□□□□□ -1.82
ATM-229ENST00000639953 A0A1B0GX51 115 aa3.71□□□□□ -1.82
ATM-229ENST00000639953 GAGE2AQ6NT46 116 aa3.71□□□□□ -1.82
ATM-229ENST00000639953 Q6ZQY7 126 aa3.71□□□□□ -1.82
ATM-229ENST00000639953 FAM19A5Q7Z5A7 132 aaPredicted RBP3.71□□□□□ -1.82
ATM-229ENST00000639953 CIRBP-AS1Q8TBR5 109 aa3.71□□□□□ -1.82
ATM-229ENST00000639953 KCNQ1DNQ9H478 68 aa3.71□□□□□ -1.82
ATM-229ENST00000639953 SRRM2Q9UQ35 2752 aaKnown RBP3.71□□□□□ -1.82
ATM-229ENST00000639953 IGKV2-24A0A0C4DH68 120 aa3.7□□□□□ -1.82
ATM-229ENST00000639953 SPRR1AP35321 89 aa3.7□□□□□ -1.82
ATM-229ENST00000639953 SEC61GP60059 68 aa3.7□□□□□ -1.82
ATM-229ENST00000639953 Q5VSD8 79 aa3.7□□□□□ -1.82
ATM-229ENST00000639953 PHF5AQ7RTV0 110 aaKnown RBP3.7□□□□□ -1.82
ATM-229ENST00000639953 NOTCH2NLQ7Z3S9 236 aa3.7□□□□□ -1.82
ATM-229ENST00000639953 Q8N377 158 aa3.7□□□□□ -1.82
ATM-229ENST00000639953 DIRC1Q969H9 104 aa3.7□□□□□ -1.82
ATM-229ENST00000639953 IGKV3D-7A0A0C4DH55 119 aa3.69□□□□□ -1.82
ATM-229ENST00000639953 FAM240AA0A1B0GVK7 77 aa3.69□□□□□ -1.82
ATM-229ENST00000639953 EPM2AB3EWF7 344 aa3.69□□□□□ -1.82
ATM-229ENST00000639953 CCKP06307 115 aa3.69□□□□□ -1.82
ATM-229ENST00000639953 Q6ZQT0 140 aa3.69□□□□□ -1.82
ATM-229ENST00000639953 C3orf22Q8N5N4 141 aa3.69□□□□□ -1.82
ATM-229ENST00000639953 SPACA4Q8TDM5 124 aa3.69□□□□□ -1.82
ATM-229ENST00000639953 DPH3Q96FX2 82 aa3.69□□□□□ -1.82
ATM-229ENST00000639953 TRBV7-6A0A0J9YX20 115 aa3.68□□□□□ -1.82
ATM-229ENST00000639953 LOC107984640A0A0U1RRK4 108 aa3.68□□□□□ -1.82
ATM-229ENST00000639953 DNAL4O96015 105 aa3.68□□□□□ -1.82
ATM-229ENST00000639953 SCGB1A1P11684 91 aa3.68□□□□□ -1.82
ATM-229ENST00000639953 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.68□□□□□ -1.82
ATM-229ENST00000639953 TRBV7-7A0A0K0K1E9 115 aa3.67□□□□□ -1.82
ATM-229ENST00000639953 DEFB105AQ8NG35 78 aa3.67□□□□□ -1.82
ATM-229ENST00000639953 KRTAP16-1A8MUX0 517 aa3.66□□□□□ -1.82
ATM-229ENST00000639953 NDUFV3P56181 108 aaKnown RBP3.66□□□□□ -1.82
ATM-229ENST00000639953 KRTAP10-4P60372 401 aaPredicted RBP3.66□□□□□ -1.82
ATM-229ENST00000639953 MRPL55Q7Z7F7 128 aaKnown RBP3.66□□□□□ -1.82
ATM-229ENST00000639953 NKAPP1Q8N9T2 125 aa3.66□□□□□ -1.82
ATM-229ENST00000639953 PLAC8Q9NZF1 115 aa3.66□□□□□ -1.82
ATM-229ENST00000639953 MYCBP2O75592 4640 aa3.65□□□□□ -1.82
ATM-229ENST00000639953 A0A087WVE0 104 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 LOC110117498A0A087WWA1 95 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 TRBV7-4A0A0J9YYF1 115 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 A0A1W2PNM2 257 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 CCDC179H3BU77 68 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 TMEM256-PLSCR3K7ERE1 68 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 INAFM2P0DMQ5 153 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 PRLHP81277 87 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 C5orf47Q569G3 176 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 Q6Q795 121 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 FAM19A1Q7Z5A9 133 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 LINC00643Q86TS7 51 aa3.65□□□□□ -1.83
ATM-229ENST00000639953 SNCGO76070 127 aa3.64□□□□□ -1.83
ATM-229ENST00000639953 RPL37AP61513 92 aaKnown RBP3.64□□□□□ -1.83
ATM-229ENST00000639953 Q6JHZ5 121 aa3.64□□□□□ -1.83
ATM-229ENST00000639953 Q6ZRX8 168 aa3.64□□□□□ -1.83
ATM-229ENST00000639953 LAMTOR3Q9UHA4 124 aa3.64□□□□□ -1.83
ATM-229ENST00000639953 FAT3Q8TDW7 4589 aa3.64□□□□□ -1.83
ATM-229ENST00000639953 ACYP1P07311 99 aa3.63□□□□□ -1.83
ATM-229ENST00000639953 RBM3P98179 157 aaKnown RBP3.63□□□□□ -1.83
ATM-229ENST00000639953 REG3GQ6UW15 175 aa3.63□□□□□ -1.83
ATM-229ENST00000639953 LINC00474Q9P2X8 69 aa3.63□□□□□ -1.83
ATM-229ENST00000639953 HERC1Q15751 4861 aa3.62□□□□□ -1.83
ATM-229ENST00000639953 IGLV5-48A0A075B6I7 105 aa3.62□□□□□ -1.83
ATM-229ENST00000639953 JMJD7-PLA2G4BH0Y9G9 81 aa3.62□□□□□ -1.83
ATM-229ENST00000639953 HIST1H4AP62805 103 aaKnown RBP3.62□□□□□ -1.83
ATM-229ENST00000639953 Q6ZVQ6 151 aa3.62□□□□□ -1.83
ATM-229ENST00000639953 PKIGQ9Y2B9 76 aa3.62□□□□□ -1.83
ATM-229ENST00000639953 LRP1Q07954 4544 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms