RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	LINC00483	Q53H64	154 aa		6.89	□□□□□ -1.31
PAX6-256	ENST00000639394	HRES1	P13985	223 aa		6.88	□□□□□ -1.31
PAX6-256	ENST00000639394	DEFB136	Q30KP8	78 aa		6.88	□□□□□ -1.31
PAX6-256	ENST00000639394	LINC00528	Q8N1L1	170 aa		6.88	□□□□□ -1.31
PAX6-256	ENST00000639394	IGLV9-49	A0A0B4J1Y8	123 aa		6.87	□□□□□ -1.31
PAX6-256	ENST00000639394		K7ERS5	55 aa		6.86	□□□□□ -1.31
PAX6-256	ENST00000639394	KRTAP10-3	P60369	221 aa		6.86	□□□□□ -1.31
PAX6-256	ENST00000639394	CHTF8	P0CG12	524 aa		6.86	□□□□□ -1.31
PAX6-256	ENST00000639394	SLURP1	P55000	103 aa		6.86	□□□□□ -1.31
PAX6-256	ENST00000639394	CMC4	P56277	68 aa	Predicted RBP	6.86	□□□□□ -1.31
PAX6-256	ENST00000639394	NF1	P21359	2839 aa		6.85	□□□□□ -1.31
PAX6-256	ENST00000639394	IGLV10-54	A0A075B6I4	117 aa		6.84	□□□□□ -1.31
PAX6-256	ENST00000639394	WFDC13	Q8IUB5	93 aa		6.84	□□□□□ -1.31
PAX6-256	ENST00000639394	DMAC1	Q96GE9	116 aa		6.84	□□□□□ -1.31
PAX6-256	ENST00000639394	IGKV3-7	A0A075B6H7	116 aa		6.84	□□□□□ -1.32
PAX6-256	ENST00000639394		A0A1B0GU69	56 aa		6.84	□□□□□ -1.32
PAX6-256	ENST00000639394	INS	P01308	110 aa		6.84	□□□□□ -1.32
PAX6-256	ENST00000639394	TP53AIP1	Q9HCN2	124 aa		6.84	□□□□□ -1.32
PAX6-256	ENST00000639394	C20orf166-AS1	Q96NR2	134 aa		6.82	□□□□□ -1.32
PAX6-256	ENST00000639394	C2CD3	Q4AC94	2353 aa		6.82	□□□□□ -1.32
PAX6-256	ENST00000639394		A0A0J9YWU9	116 aa		6.81	□□□□□ -1.32
PAX6-256	ENST00000639394	WFDC10B	Q8IUB3	73 aa		6.81	□□□□□ -1.32
PAX6-256	ENST00000639394		A8MWP4	228 aa		6.8	□□□□□ -1.32
PAX6-256	ENST00000639394	KRTAP24-1	Q3LI83	254 aa		6.8	□□□□□ -1.32
PAX6-256	ENST00000639394	IGKV3OR2-268	A0A0C4DH90	116 aa		6.8	□□□□□ -1.32
PAX6-256	ENST00000639394	TNP2	Q05952	138 aa		6.8	□□□□□ -1.32
PAX6-256	ENST00000639394	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.78	□□□□□ -1.32
PAX6-256	ENST00000639394	LUZP6	Q538Z0	58 aa		6.78	□□□□□ -1.32
PAX6-256	ENST00000639394		Q8N377	158 aa		6.78	□□□□□ -1.32
PAX6-256	ENST00000639394		A0A1B0GUV1	79 aa		6.77	□□□□□ -1.33
PAX6-256	ENST00000639394	HTN1	P15515	57 aa		6.77	□□□□□ -1.33
PAX6-256	ENST00000639394	C8orf17	Q9NRJ1	99 aa		6.77	□□□□□ -1.33
PAX6-256	ENST00000639394	IGLV5-52	A0A0A0MRZ9	124 aa		6.76	□□□□□ -1.33
PAX6-256	ENST00000639394	NUPR2	A6NF83	97 aa		6.76	□□□□□ -1.33
PAX6-256	ENST00000639394	ACYP2	P14621	99 aa		6.76	□□□□□ -1.33
PAX6-256	ENST00000639394	DHRS4-AS1	Q9P1J3	65 aa		6.76	□□□□□ -1.33
PAX6-256	ENST00000639394	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.76	□□□□□ -1.33
PAX6-256	ENST00000639394	SETD2	Q9BYW2	2564 aa	Predicted RBP	6.76	□□□□□ -1.33
PAX6-256	ENST00000639394	NIPBL	Q6KC79	2804 aa	eCLIP	6.76	□□□□□ -1.33
PAX6-256	ENST00000639394	TEP1	Q99973	2627 aa	Known RBP	6.75	□□□□□ -1.33
PAX6-256	ENST00000639394	CAMK2N2	Q96S95	79 aa		6.75	□□□□□ -1.33
PAX6-256	ENST00000639394	JMJD1C	Q15652	2540 aa		6.75	□□□□□ -1.33
PAX6-256	ENST00000639394	DEFB116	Q30KQ4	102 aa		6.75	□□□□□ -1.33
PAX6-256	ENST00000639394	C7orf33	Q8WU49	177 aa		6.75	□□□□□ -1.33
PAX6-256	ENST00000639394	MAST4	O15021	2626 aa		6.74	□□□□□ -1.33
PAX6-256	ENST00000639394		A8MUU9	505 aa		6.74	□□□□□ -1.33
PAX6-256	ENST00000639394	TRGV1	A0A0A0MS02	117 aa		6.73	□□□□□ -1.33
PAX6-256	ENST00000639394	PCOTH	Q58A44	107 aa		6.73	□□□□□ -1.33
PAX6-256	ENST00000639394	CASC10	Q5T4H9	136 aa		6.72	□□□□□ -1.33
PAX6-256	ENST00000639394	DNAH10OS	P0CZ25	163 aa		6.71	□□□□□ -1.33
PAX6-256	ENST00000639394	KRTAP26-1	Q6PEX3	210 aa		6.71	□□□□□ -1.33
PAX6-256	ENST00000639394	DEFB131A	P59861	70 aa		6.71	□□□□□ -1.34
PAX6-256	ENST00000639394	CSNK1G2-AS1	Q8NCQ2	148 aa		6.7	□□□□□ -1.34
PAX6-256	ENST00000639394	FBN1	P35555	2871 aa	Known RBP	6.7	□□□□□ -1.34
PAX6-256	ENST00000639394	WNK1	Q9H4A3	2382 aa		6.7	□□□□□ -1.34
PAX6-256	ENST00000639394	NDUFAF8	A1L188	74 aa		6.69	□□□□□ -1.34
PAX6-256	ENST00000639394		J3QL48	77 aa		6.69	□□□□□ -1.34
PAX6-256	ENST00000639394	IGKV2-24	A0A0C4DH68	120 aa		6.69	□□□□□ -1.34
PAX6-256	ENST00000639394	TENM1	Q9UKZ4	2725 aa		6.69	□□□□□ -1.34
PAX6-256	ENST00000639394	KRTAP3-3	Q9BYR6	98 aa		6.68	□□□□□ -1.34
PAX6-256	ENST00000639394	KRTAP3-2	Q9BYR7	98 aa		6.68	□□□□□ -1.34
PAX6-256	ENST00000639394	LINC00472	Q9H8W2	130 aa		6.68	□□□□□ -1.34
PAX6-256	ENST00000639394	ATR	Q13535	2644 aa		6.68	□□□□□ -1.34
PAX6-256	ENST00000639394	EGFEM1P	Q0D2K5	195 aa		6.67	□□□□□ -1.34
PAX6-256	ENST00000639394	DEFB105A	Q8NG35	78 aa		6.67	□□□□□ -1.34
PAX6-256	ENST00000639394		Q5W150	140 aa		6.66	□□□□□ -1.34
PAX6-256	ENST00000639394	ANG	P03950	147 aa	Known RBP	6.66	□□□□□ -1.34
PAX6-256	ENST00000639394	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.64	□□□□□ -1.35
PAX6-256	ENST00000639394	IGLV7-43	P04211	117 aa		6.64	□□□□□ -1.35
PAX6-256	ENST00000639394	TLX1NB	P0CAT3	122 aa		6.64	□□□□□ -1.35
PAX6-256	ENST00000639394	UNQ6190/PRO20217	Q6UXQ8	127 aa		6.64	□□□□□ -1.35
PAX6-256	ENST00000639394	C6orf48	Q9UBA6	75 aa		6.62	□□□□□ -1.35
PAX6-256	ENST00000639394	VWF	P04275	2813 aa		6.62	□□□□□ -1.35
PAX6-256	ENST00000639394	TRRAP	Q9Y4A5	3859 aa		6.61	□□□□□ -1.35
PAX6-256	ENST00000639394	SPINT4	Q6UDR6	99 aa		6.6	□□□□□ -1.35
PAX6-256	ENST00000639394	IGLV8-61	A0A075B6I0	122 aa		6.59	□□□□□ -1.35
PAX6-256	ENST00000639394	GIG44	P09565	113 aa	Predicted RBP	6.59	□□□□□ -1.35
PAX6-256	ENST00000639394	MMP24-AS1	A0A0U1RRL7	71 aa		6.58	□□□□□ -1.36
PAX6-256	ENST00000639394	STAB1	Q9NY15	2570 aa		6.58	□□□□□ -1.36
PAX6-256	ENST00000639394	CMYA5	Q8N3K9	4069 aa		6.58	□□□□□ -1.36
PAX6-256	ENST00000639394	KRTAP10-11	P60412	298 aa		6.58	□□□□□ -1.36
PAX6-256	ENST00000639394	ANK2	Q01484	3957 aa		6.58	□□□□□ -1.36
PAX6-256	ENST00000639394	COL6A5	A8TX70	2615 aa		6.57	□□□□□ -1.36
PAX6-256	ENST00000639394	RPL37AP8	A6NKH3	93 aa		6.57	□□□□□ -1.36
PAX6-256	ENST00000639394	KRTAP15-1	Q3LI76	137 aa		6.57	□□□□□ -1.36
PAX6-256	ENST00000639394	NOTCH3	Q9UM47	2321 aa		6.57	□□□□□ -1.36
PAX6-256	ENST00000639394		Q6ZRX8	168 aa		6.57	□□□□□ -1.36
PAX6-256	ENST00000639394	CLPSL2	Q6UWE3	100 aa		6.56	□□□□□ -1.36
PAX6-256	ENST00000639394	FAM168B	A1KXE4	195 aa		6.55	□□□□□ -1.36
PAX6-256	ENST00000639394	LINC00304	Q8N9R0	145 aa		6.55	□□□□□ -1.36
PAX6-256	ENST00000639394		A0A087WTM6	91 aa		6.55	□□□□□ -1.36
PAX6-256	ENST00000639394	RPL37A	P61513	92 aa	Known RBP	6.54	□□□□□ -1.36
PAX6-256	ENST00000639394	C16orf74	Q96GX8	76 aa		6.54	□□□□□ -1.36
PAX6-256	ENST00000639394	IGFL1	Q6UW32	110 aa		6.53	□□□□□ -1.36
PAX6-256	ENST00000639394	PLA2G2D	Q9UNK4	145 aa		6.51	□□□□□ -1.37
PAX6-256	ENST00000639394	DNAH3	Q8TD57	4116 aa		6.51	□□□□□ -1.37
PAX6-256	ENST00000639394	NOP10	Q9NPE3	64 aa	Known RBP	6.49	□□□□□ -1.37
PAX6-256	ENST00000639394	SPRR1A	P35321	89 aa		6.49	□□□□□ -1.37
PAX6-256	ENST00000639394	KRTAP21-3	Q3LHN1	58 aa		6.49	□□□□□ -1.37
PAX6-256	ENST00000639394	DEFB135	Q30KP9	77 aa		6.48	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms