RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 Q6ZRU5 148 aa4.58□□□□□ -1.68
LINC01108-202ENST00000635227 Q8N814 137 aa4.58□□□□□ -1.68
LINC01108-202ENST00000635227 NKAPP1Q8N9T2 125 aa4.58□□□□□ -1.68
LINC01108-202ENST00000635227 TLX1NBP0CAT3 122 aa4.57□□□□□ -1.68
LINC01108-202ENST00000635227 CXCL6P80162 114 aa4.57□□□□□ -1.68
LINC01108-202ENST00000635227 KRTAP26-1Q6PEX3 210 aa4.57□□□□□ -1.68
LINC01108-202ENST00000635227 LINC00643Q86TS7 51 aa4.57□□□□□ -1.68
LINC01108-202ENST00000635227 UBE2DNLQ8IWF7 75 aa4.57□□□□□ -1.68
LINC01108-202ENST00000635227 LINC00526Q96FQ7 95 aa4.57□□□□□ -1.68
LINC01108-202ENST00000635227 LINC00588Q9Y4M8 146 aa4.57□□□□□ -1.68
LINC01108-202ENST00000635227 DNAH11Q96DT5 4516 aa4.56□□□□□ -1.68
LINC01108-202ENST00000635227 MT-ATP8P03928 68 aa4.56□□□□□ -1.68
LINC01108-202ENST00000635227 PDE6GP18545 87 aa4.56□□□□□ -1.68
LINC01108-202ENST00000635227 LINC00575Q6W349 94 aa4.56□□□□□ -1.68
LINC01108-202ENST00000635227 IMUPQ9GZP8 106 aa4.56□□□□□ -1.68
LINC01108-202ENST00000635227 TRBV10-3A0A0K0K1G6 114 aa4.55□□□□□ -1.68
LINC01108-202ENST00000635227 NUPR2A6NF83 97 aa4.55□□□□□ -1.68
LINC01108-202ENST00000635227 ZNF73O43830 326 aaPredicted RBP4.55□□□□□ -1.68
LINC01108-202ENST00000635227 COX7BP24311 80 aa4.55□□□□□ -1.68
LINC01108-202ENST00000635227 TTC32Q5I0X7 151 aa4.55□□□□□ -1.68
LINC01108-202ENST00000635227 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.55□□□□□ -1.68
LINC01108-202ENST00000635227 XAGE1AQ9HD64 81 aa4.55□□□□□ -1.68
LINC01108-202ENST00000635227 TRBV7-7A0A0K0K1E9 115 aa4.54□□□□□ -1.68
LINC01108-202ENST00000635227 LOC107984640A0A0U1RRK4 108 aa4.54□□□□□ -1.68
LINC01108-202ENST00000635227 ELOF1P60002 83 aaKnown RBP4.54□□□□□ -1.68
LINC01108-202ENST00000635227 PRR3P79522 188 aaKnown RBP4.54□□□□□ -1.68
LINC01108-202ENST00000635227 OBSCN-AS1Q96MR7 158 aa4.54□□□□□ -1.68
LINC01108-202ENST00000635227 FAT2Q9NYQ8 4349 aa4.54□□□□□ -1.68
LINC01108-202ENST00000635227 PSCAO43653 123 aa4.53□□□□□ -1.68
LINC01108-202ENST00000635227 ATP5EP2Q5VTU8 51 aa4.53□□□□□ -1.68
LINC01108-202ENST00000635227 ANAPC13Q9BS18 74 aa4.53□□□□□ -1.68
LINC01108-202ENST00000635227 C14orf132Q9NPU4 83 aa4.53□□□□□ -1.68
LINC01108-202ENST00000635227 LAMTOR3Q9UHA4 124 aa4.53□□□□□ -1.68
LINC01108-202ENST00000635227 CCKP06307 115 aa4.52□□□□□ -1.69
LINC01108-202ENST00000635227 KRTAP12-2P59991 146 aa4.52□□□□□ -1.69
LINC01108-202ENST00000635227 RBM3P98179 157 aaKnown RBP4.52□□□□□ -1.69
LINC01108-202ENST00000635227 SDIM1Q6ZPB5 146 aa4.52□□□□□ -1.69
LINC01108-202ENST00000635227 DSCR8Q96T75 97 aa4.52□□□□□ -1.69
LINC01108-202ENST00000635227 VPS13DQ5THJ4 4388 aa4.51□□□□□ -1.69
LINC01108-202ENST00000635227 Q6JHZ5 121 aa4.51□□□□□ -1.69
LINC01108-202ENST00000635227 Q6ZQY7 126 aa4.51□□□□□ -1.69
LINC01108-202ENST00000635227 Q8NDZ9 215 aa4.51□□□□□ -1.69
LINC01108-202ENST00000635227 UBL5Q9BZL1 73 aa4.51□□□□□ -1.69
LINC01108-202ENST00000635227 C22orf24Q9Y442 160 aa4.51□□□□□ -1.69
LINC01108-202ENST00000635227 MYCBP2O75592 4640 aa4.5□□□□□ -1.69
LINC01108-202ENST00000635227 LOC110117498A0A087WWA1 95 aa4.5□□□□□ -1.69
LINC01108-202ENST00000635227 ETDCA0A1B0GVM5 59 aa4.5□□□□□ -1.69
LINC01108-202ENST00000635227 KCNQ1DNQ9H478 68 aa4.5□□□□□ -1.69
LINC01108-202ENST00000635227 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
LINC01108-202ENST00000635227 APLNQ9ULZ1 77 aa4.49□□□□□ -1.69
LINC01108-202ENST00000635227 DNAH2Q9P225 4427 aa4.48□□□□□ -1.69
LINC01108-202ENST00000635227 CNBPP62633 177 aaKnown RBP4.48□□□□□ -1.69
LINC01108-202ENST00000635227 C9orf129Q5T035 196 aaKnown RBP4.48□□□□□ -1.69
LINC01108-202ENST00000635227 KRTAP11-1Q8IUC1 163 aa4.48□□□□□ -1.69
LINC01108-202ENST00000635227 Q6ZQT0 140 aa4.47□□□□□ -1.69
LINC01108-202ENST00000635227 MRPL55Q7Z7F7 128 aaKnown RBP4.47□□□□□ -1.69
LINC01108-202ENST00000635227 C7orf33Q8WU49 177 aa4.47□□□□□ -1.69
LINC01108-202ENST00000635227 FAM236AA0A1B0GUQ0 79 aa4.46□□□□□ -1.7
LINC01108-202ENST00000635227 FAM236BA0A1B0GV22 79 aa4.46□□□□□ -1.7
LINC01108-202ENST00000635227 C16orf90A8MZG2 172 aa4.46□□□□□ -1.7
LINC01108-202ENST00000635227 ATOX1O00244 68 aa4.46□□□□□ -1.7
LINC01108-202ENST00000635227 Q6ZRX8 168 aa4.46□□□□□ -1.7
LINC01108-202ENST00000635227 SMCR5Q8TEV8 140 aa4.46□□□□□ -1.7
LINC01108-202ENST00000635227 LINC00474Q9P2X8 69 aa4.46□□□□□ -1.7
LINC01108-202ENST00000635227 SRRM2Q9UQ35 2752 aaKnown RBP4.45□□□□□ -1.7
LINC01108-202ENST00000635227 IGLV1-50A0A075B6I6 118 aa4.45□□□□□ -1.7
LINC01108-202ENST00000635227 A0A1B0GW54 56 aa4.45□□□□□ -1.7
LINC01108-202ENST00000635227 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
LINC01108-202ENST00000635227 FAM19A5Q7Z5A7 132 aaPredicted RBP4.45□□□□□ -1.7
LINC01108-202ENST00000635227 LINC00846Q9NV44 126 aa4.45□□□□□ -1.7
LINC01108-202ENST00000635227 TRBV7-4A0A0J9YYF1 115 aa4.44□□□□□ -1.7
LINC01108-202ENST00000635227 NBDYA0A0U1RRE5 68 aa4.44□□□□□ -1.7
LINC01108-202ENST00000635227 SPRR1AP35321 89 aa4.44□□□□□ -1.7
LINC01108-202ENST00000635227 F8WEM9 126 aa4.43□□□□□ -1.7
LINC01108-202ENST00000635227 FUSP35637 526 aaKnown RBP eCLIP4.43□□□□□ -1.7
LINC01108-202ENST00000635227 HIST1H4AP62805 103 aaKnown RBP4.42□□□□□ -1.7
LINC01108-202ENST00000635227 UBE2BP63146 152 aa4.42□□□□□ -1.7
LINC01108-202ENST00000635227 FLG2Q5D862 2391 aaPredicted RBP4.42□□□□□ -1.7
LINC01108-202ENST00000635227 PKD1P98161 4303 aa4.42□□□□□ -1.7
LINC01108-202ENST00000635227 APOBP04114 4563 aaKnown RBP4.41□□□□□ -1.7
LINC01108-202ENST00000635227 IGKV3D-7A0A0C4DH55 119 aa4.41□□□□□ -1.7
LINC01108-202ENST00000635227 IGKV2-24A0A0C4DH68 120 aa4.41□□□□□ -1.7
LINC01108-202ENST00000635227 ANAPC11Q9NYG5 84 aa4.41□□□□□ -1.7
LINC01108-202ENST00000635227 IGLV5-48A0A075B6I7 105 aa4.4□□□□□ -1.71
LINC01108-202ENST00000635227 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.4□□□□□ -1.71
LINC01108-202ENST00000635227 A0A096LNI7 61 aa4.4□□□□□ -1.71
LINC01108-202ENST00000635227 KRTAP4-16G5E9R7 235 aaPredicted RBP4.4□□□□□ -1.71
LINC01108-202ENST00000635227 UQCRQO14949 82 aa4.4□□□□□ -1.71
LINC01108-202ENST00000635227 BCE1O60756 84 aa4.4□□□□□ -1.71
LINC01108-202ENST00000635227 SMIM20Q8N5G0 67 aa4.4□□□□□ -1.71
LINC01108-202ENST00000635227 C9orf163Q8N9P6 203 aa4.4□□□□□ -1.71
LINC01108-202ENST00000635227 DNAH17Q9UFH2 4485 aa4.4□□□□□ -1.71
LINC01108-202ENST00000635227 HAMPP81172 84 aa4.39□□□□□ -1.71
LINC01108-202ENST00000635227 FAM19A1Q7Z5A9 133 aa4.39□□□□□ -1.71
LINC01108-202ENST00000635227 DEFB105AQ8NG35 78 aa4.39□□□□□ -1.71
LINC01108-202ENST00000635227 DNAH6Q9C0G6 4158 aa4.38□□□□□ -1.71
LINC01108-202ENST00000635227 IGLV8-61A0A075B6I0 122 aa4.38□□□□□ -1.71
LINC01108-202ENST00000635227 H0Y9J4 135 aa4.38□□□□□ -1.71
LINC01108-202ENST00000635227 COX7CP15954 63 aa4.38□□□□□ -1.71
LINC01108-202ENST00000635227 C9orf153Q5TBE3 101 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms