RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 ALMS1Q8TCU4 4167 aa11.25□□□□□ -0.61
PCF11-207ENST00000624931 PSCAO43653 123 aa11.23□□□□□ -0.61
PCF11-207ENST00000624931 Q6ZRN7 208 aaPredicted RBP11.23□□□□□ -0.61
PCF11-207ENST00000624931 Q9BRP9 147 aa11.22□□□□□ -0.61
PCF11-207ENST00000624931 Q6ZR54 194 aa11.21□□□□□ -0.61
PCF11-207ENST00000624931 LINC00336Q6ZUF6 198 aa11.21□□□□□ -0.62
PCF11-207ENST00000624931 SMIM29Q86T20 159 aa11.19□□□□□ -0.62
PCF11-207ENST00000624931 HIGD2AQ9BW72 106 aa11.19□□□□□ -0.62
PCF11-207ENST00000624931 MRPL55Q7Z7F7 128 aaKnown RBP11.17□□□□□ -0.62
PCF11-207ENST00000624931 KMT2AQ03164 3969 aa11.17□□□□□ -0.62
PCF11-207ENST00000624931 LRCOL1A6NCL2 159 aa11.16□□□□□ -0.62
PCF11-207ENST00000624931 RPL37AP8A6NKH3 93 aa11.16□□□□□ -0.62
PCF11-207ENST00000624931 LINC00474Q9P2X8 69 aa11.16□□□□□ -0.62
PCF11-207ENST00000624931 FAM30AQ9NZY2 134 aa11.15□□□□□ -0.62
PCF11-207ENST00000624931 DNAH6Q9C0G6 4158 aa11.15□□□□□ -0.62
PCF11-207ENST00000624931 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.15□□□□□ -0.63
PCF11-207ENST00000624931 DSCR10P59022 87 aa11.14□□□□□ -0.63
PCF11-207ENST00000624931 UBE2BP63146 152 aa11.13□□□□□ -0.63
PCF11-207ENST00000624931 REG3GQ6UW15 175 aa11.13□□□□□ -0.63
PCF11-207ENST00000624931 ST20-AS1Q8NBB2 130 aa11.13□□□□□ -0.63
PCF11-207ENST00000624931 ZCCHC13Q8WW36 166 aaKnown RBP11.13□□□□□ -0.63
PCF11-207ENST00000624931 DNAH2Q9P225 4427 aa11.11□□□□□ -0.63
PCF11-207ENST00000624931 HCG22E2RYF7 251 aa11.1□□□□□ -0.63
PCF11-207ENST00000624931 FAM168BA1KXE4 195 aa11.09□□□□□ -0.63
PCF11-207ENST00000624931 NDUFB1O75438 58 aa11.09□□□□□ -0.63
PCF11-207ENST00000624931 C1orf134Q5TEV5 83 aa11.09□□□□□ -0.63
PCF11-207ENST00000624931 IGLV8-61A0A075B6I0 122 aa11.09□□□□□ -0.63
PCF11-207ENST00000624931 hDV103S1A0JD37 113 aa11.09□□□□□ -0.63
PCF11-207ENST00000624931 KRTAP7-1Q8IUC3 87 aa11.08□□□□□ -0.64
PCF11-207ENST00000624931 A0A087WTM6 91 aa11.07□□□□□ -0.64
PCF11-207ENST00000624931 K7EQZ3 153 aa11.07□□□□□ -0.64
PCF11-207ENST00000624931 FAM229BQ4G0N7 80 aa11.07□□□□□ -0.64
PCF11-207ENST00000624931 C14orf177Q52M58 125 aa11.07□□□□□ -0.64
PCF11-207ENST00000624931 CYP4F30PQ9H0H9 118 aa11.07□□□□□ -0.64
PCF11-207ENST00000624931 CNBPP62633 177 aaKnown RBP11.06□□□□□ -0.64
PCF11-207ENST00000624931 MPLKIPQ8TAP9 179 aa11.04□□□□□ -0.64
PCF11-207ENST00000624931 HYDINQ4G0P3 5121 aa11.03□□□□□ -0.64
PCF11-207ENST00000624931 Q1T7F1 81 aa11.03□□□□□ -0.64
PCF11-207ENST00000624931 DNAH17Q9UFH2 4485 aa11.01□□□□□ -0.65
PCF11-207ENST00000624931 H3BPC8 53 aa11.01□□□□□ -0.65
PCF11-207ENST00000624931 RTL8CO15255 209 aa11.01□□□□□ -0.65
PCF11-207ENST00000624931 MP68P56378 58 aa11.01□□□□□ -0.65
PCF11-207ENST00000624931 IGFL1Q6UW32 110 aa11.01□□□□□ -0.65
PCF11-207ENST00000624931 BRK1Q8WUW1 75 aa11.01□□□□□ -0.65
PCF11-207ENST00000624931 A0A096LNI7 61 aa11.01□□□□□ -0.65
PCF11-207ENST00000624931 SACSQ9NZJ4 4579 aa10.99□□□□□ -0.65
PCF11-207ENST00000624931 IGKV2-24A0A0C4DH68 120 aa10.98□□□□□ -0.65
PCF11-207ENST00000624931 C16orf90A8MZG2 172 aa10.98□□□□□ -0.65
PCF11-207ENST00000624931 CHTF8P0CG12 524 aa10.98□□□□□ -0.65
PCF11-207ENST00000624931 C1orf64Q8NEQ6 169 aa10.98□□□□□ -0.65
PCF11-207ENST00000624931 C9orf163Q8N9P6 203 aa10.96□□□□□ -0.65
PCF11-207ENST00000624931 V9GYY9 64 aa10.96□□□□□ -0.65
PCF11-207ENST00000624931 H0Y9J4 135 aa10.95□□□□□ -0.66
PCF11-207ENST00000624931 FRAS1Q86XX4 4008 aa10.95□□□□□ -0.66
PCF11-207ENST00000624931 SPRR1BP22528 89 aa10.95□□□□□ -0.66
PCF11-207ENST00000624931 PKIGQ9Y2B9 76 aa10.94□□□□□ -0.66
PCF11-207ENST00000624931 UBE2AP49459 152 aa10.93□□□□□ -0.66
PCF11-207ENST00000624931 SPANXA2-OT1Q8N9U9 137 aa10.93□□□□□ -0.66
PCF11-207ENST00000624931 A0A087WSZ3 146 aa10.92□□□□□ -0.66
PCF11-207ENST00000624931 PANO1I0J062 215 aa10.92□□□□□ -0.66
PCF11-207ENST00000624931 TRAV22A0A0B4J277 110 aa10.91□□□□□ -0.66
PCF11-207ENST00000624931 KRTAP29-1A8MX34 341 aaPredicted RBP10.91□□□□□ -0.66
PCF11-207ENST00000624931 A0A1W2PNN7 141 aa10.9□□□□□ -0.66
PCF11-207ENST00000624931 KRTAP10-2P60368 255 aa10.9□□□□□ -0.66
PCF11-207ENST00000624931 IGLV5-52A0A0A0MRZ9 124 aa10.89□□□□□ -0.67
PCF11-207ENST00000624931 WFDC13Q8IUB5 93 aa10.88□□□□□ -0.67
PCF11-207ENST00000624931 PRR15Q8IV56 129 aa10.88□□□□□ -0.67
PCF11-207ENST00000624931 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.88□□□□□ -0.67
PCF11-207ENST00000624931 DNAH11Q96DT5 4516 aa10.88□□□□□ -0.67
PCF11-207ENST00000624931 HECTD4Q9Y4D8 3996 aa10.88□□□□□ -0.67
PCF11-207ENST00000624931 FAT2Q9NYQ8 4349 aa10.88□□□□□ -0.67
PCF11-207ENST00000624931 PRLHP81277 87 aa10.87□□□□□ -0.67
PCF11-207ENST00000624931 A8MWP4 228 aa10.87□□□□□ -0.67
PCF11-207ENST00000624931 C1orf195Q5TG92 126 aa10.87□□□□□ -0.67
PCF11-207ENST00000624931 CASC2Q6XLA1 102 aa10.87□□□□□ -0.67
PCF11-207ENST00000624931 LINC00208Q96KT6 92 aa10.84□□□□□ -0.67
PCF11-207ENST00000624931 H0Y9P7 68 aa10.83□□□□□ -0.68
PCF11-207ENST00000624931 RYR2Q92736 4967 aa10.83□□□□□ -0.68
PCF11-207ENST00000624931 SPACA4Q8TDM5 124 aa10.82□□□□□ -0.68
PCF11-207ENST00000624931 LINC00472Q9H8W2 130 aa10.82□□□□□ -0.68
PCF11-207ENST00000624931 DEFB116Q30KQ4 102 aa10.81□□□□□ -0.68
PCF11-207ENST00000624931 PHF5AQ7RTV0 110 aaKnown RBP10.81□□□□□ -0.68
PCF11-207ENST00000624931 A0A0G2JQZ4 141 aa10.8□□□□□ -0.68
PCF11-207ENST00000624931 DNAH5Q8TE73 4624 aa10.79□□□□□ -0.68
PCF11-207ENST00000624931 KMT2CQ8NEZ4 4911 aaKnown RBP10.79□□□□□ -0.68
PCF11-207ENST00000624931 KRTAP11-1Q8IUC1 163 aa10.78□□□□□ -0.68
PCF11-207ENST00000624931 PKD1P98161 4303 aa10.78□□□□□ -0.68
PCF11-207ENST00000624931 RPL37AP61513 92 aaKnown RBP10.78□□□□□ -0.68
PCF11-207ENST00000624931 LIMD2Q9BT23 127 aa10.76□□□□□ -0.69
PCF11-207ENST00000624931 KRTAP10-1P60331 282 aa10.75□□□□□ -0.69
PCF11-207ENST00000624931 PRR4Q16378 134 aa10.74□□□□□ -0.69
PCF11-207ENST00000624931 TP53AIP1Q9HCN2 124 aa10.73□□□□□ -0.69
PCF11-207ENST00000624931 PSPHP1O15172 72 aa10.71□□□□□ -0.69
PCF11-207ENST00000624931 MMP24-AS1A0A0U1RRL7 71 aa10.7□□□□□ -0.7
PCF11-207ENST00000624931 PLAC8Q9NZF1 115 aa10.69□□□□□ -0.7
PCF11-207ENST00000624931 IGLV7-46A0A075B6I9 117 aa10.68□□□□□ -0.7
PCF11-207ENST00000624931 A0A1B0GVY2 172 aa10.68□□□□□ -0.7
PCF11-207ENST00000624931 DNAH8Q96JB1 4490 aa10.67□□□□□ -0.7
PCF11-207ENST00000624931 MOBPQ13875 183 aa10.67□□□□□ -0.7
PCF11-207ENST00000624931 ASB16-AS1Q495Z4 193 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms