RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 Q6ZRU5 148 aa2.61□□□□□ -1.99
ATRX-209ENST00000623242 C6orf223Q8N319 242 aa2.61□□□□□ -1.99
ATRX-209ENST00000623242 C6orf48Q9UBA6 75 aa2.61□□□□□ -1.99
ATRX-209ENST00000623242 APLNQ9ULZ1 77 aa2.61□□□□□ -1.99
ATRX-209ENST00000623242 LINC00588Q9Y4M8 146 aa2.61□□□□□ -1.99
ATRX-209ENST00000623242 TRBV10-3A0A0K0K1G6 114 aa2.6□□□□□ -1.99
ATRX-209ENST00000623242 M0R2N4 97 aa2.6□□□□□ -1.99
ATRX-209ENST00000623242 HAMPP81172 84 aa2.6□□□□□ -1.99
ATRX-209ENST00000623242 NREPQ16612 68 aa2.6□□□□□ -1.99
ATRX-209ENST00000623242 Q6ZQY7 126 aa2.6□□□□□ -1.99
ATRX-209ENST00000623242 MRPL55Q7Z7F7 128 aaKnown RBP2.6□□□□□ -1.99
ATRX-209ENST00000623242 C7orf33Q8WU49 177 aa2.6□□□□□ -1.99
ATRX-209ENST00000623242 C14orf132Q9NPU4 83 aa2.6□□□□□ -1.99
ATRX-209ENST00000623242 C16orf90A8MZG2 172 aa2.59□□□□□ -1.99
ATRX-209ENST00000623242 PANO1I0J062 215 aa2.59□□□□□ -1.99
ATRX-209ENST00000623242 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
ATRX-209ENST00000623242 UBE2AP49459 152 aa2.59□□□□□ -1.99
ATRX-209ENST00000623242 ELOF1P60002 83 aaKnown RBP2.59□□□□□ -1.99
ATRX-209ENST00000623242 PRR3P79522 188 aaKnown RBP2.59□□□□□ -1.99
ATRX-209ENST00000623242 DEFB105AQ8NG35 78 aa2.59□□□□□ -1.99
ATRX-209ENST00000623242 LINC00526Q96FQ7 95 aa2.59□□□□□ -1.99
ATRX-209ENST00000623242 KCNQ1DNQ9H478 68 aa2.59□□□□□ -1.99
ATRX-209ENST00000623242 ZNF706Q9Y5V0 76 aaPredicted RBP2.59□□□□□ -1.99
ATRX-209ENST00000623242 RYR1P21817 5038 aa2.59□□□□□ -2
ATRX-209ENST00000623242 PRKDCP78527 4128 aaKnown RBP2.59□□□□□ -2
ATRX-209ENST00000623242 LOC110117498A0A087WWA1 95 aa2.58□□□□□ -2
ATRX-209ENST00000623242 MT-ATP8P03928 68 aa2.58□□□□□ -2
ATRX-209ENST00000623242 CNBPP62633 177 aaKnown RBP2.58□□□□□ -2
ATRX-209ENST00000623242 Q6JHZ5 121 aa2.58□□□□□ -2
ATRX-209ENST00000623242 FAM19A1Q7Z5A9 133 aa2.58□□□□□ -2
ATRX-209ENST00000623242 KRTAP11-1Q8IUC1 163 aa2.58□□□□□ -2
ATRX-209ENST00000623242 RYR3Q15413 4870 aa2.58□□□□□ -2
ATRX-209ENST00000623242 IGKV2-24A0A0C4DH68 120 aa2.57□□□□□ -2
ATRX-209ENST00000623242 TRBV7-7A0A0K0K1E9 115 aa2.57□□□□□ -2
ATRX-209ENST00000623242 NBDYA0A0U1RRE5 68 aa2.57□□□□□ -2
ATRX-209ENST00000623242 BCE1O60756 84 aa2.57□□□□□ -2
ATRX-209ENST00000623242 C1orf134Q5TEV5 83 aa2.57□□□□□ -2
ATRX-209ENST00000623242 FAM19A5Q7Z5A7 132 aaPredicted RBP2.57□□□□□ -2
ATRX-209ENST00000623242 C15orf56Q8N910 161 aa2.57□□□□□ -2
ATRX-209ENST00000623242 LINC00167Q96N53 147 aa2.57□□□□□ -2
ATRX-209ENST00000623242 ANAPC11Q9NYG5 84 aa2.57□□□□□ -2
ATRX-209ENST00000623242 C22orf24Q9Y442 160 aa2.57□□□□□ -2
ATRX-209ENST00000623242 HYDINQ4G0P3 5121 aa2.57□□□□□ -2
ATRX-209ENST00000623242 BIRC6Q9NR09 4857 aa2.56□□□□□ -2
ATRX-209ENST00000623242 IGLV1-50A0A075B6I6 118 aa2.56□□□□□ -2
ATRX-209ENST00000623242 LCE6AA0A183 80 aa2.56□□□□□ -2
ATRX-209ENST00000623242 FAM236AA0A1B0GUQ0 79 aa2.56□□□□□ -2
ATRX-209ENST00000623242 FAM236BA0A1B0GV22 79 aa2.56□□□□□ -2
ATRX-209ENST00000623242 BPY2O14599 106 aa2.56□□□□□ -2
ATRX-209ENST00000623242 UQCRQO14949 82 aa2.56□□□□□ -2
ATRX-209ENST00000623242 ZNF861PO60384 105 aa2.56□□□□□ -2
ATRX-209ENST00000623242 NDUFB1O75438 58 aa2.56□□□□□ -2
ATRX-209ENST00000623242 C9orf153Q5TBE3 101 aa2.56□□□□□ -2
ATRX-209ENST00000623242 Q6ZRX8 168 aa2.56□□□□□ -2
ATRX-209ENST00000623242 OBSCN-AS1Q96MR7 158 aa2.56□□□□□ -2
ATRX-209ENST00000623242 TENM3Q9P273 2699 aa2.55□□□□□ -2
ATRX-209ENST00000623242 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.55□□□□□ -2
ATRX-209ENST00000623242 SDIM1Q6ZPB5 146 aa2.55□□□□□ -2
ATRX-209ENST00000623242 HIGD2AQ9BW72 106 aa2.55□□□□□ -2
ATRX-209ENST00000623242 IGKV3D-7A0A0C4DH55 119 aa2.54□□□□□ -2
ATRX-209ENST00000623242 H0Y9J4 135 aa2.54□□□□□ -2
ATRX-209ENST00000623242 NDUFC1O43677 76 aa2.54□□□□□ -2
ATRX-209ENST00000623242 C1orf137Q5JT78 98 aa2.54□□□□□ -2
ATRX-209ENST00000623242 Q6ZQT0 140 aa2.54□□□□□ -2
ATRX-209ENST00000623242 C3orf22Q8N5N4 141 aa2.54□□□□□ -2
ATRX-209ENST00000623242 C9orf163Q8N9P6 203 aa2.54□□□□□ -2
ATRX-209ENST00000623242 SS18L2Q9UHA2 77 aa2.54□□□□□ -2
ATRX-209ENST00000623242 STAB2Q8WWQ8 2551 aa2.54□□□□□ -2
ATRX-209ENST00000623242 COL7A1Q02388 2944 aa2.53□□□□□ -2
ATRX-209ENST00000623242 STARD9Q9P2P6 4700 aa2.53□□□□□ -2
ATRX-209ENST00000623242 J3KT08 172 aa2.53□□□□□ -2
ATRX-209ENST00000623242 RPL37AP61513 92 aaKnown RBP2.53□□□□□ -2
ATRX-209ENST00000623242 KRTAP26-1Q6PEX3 210 aa2.53□□□□□ -2
ATRX-209ENST00000623242 SERP2Q8N6R1 65 aa2.53□□□□□ -2
ATRX-209ENST00000623242 LINC00846Q9NV44 126 aa2.53□□□□□ -2
ATRX-209ENST00000623242 PLECQ15149 4684 aaKnown RBP2.53□□□□□ -2
ATRX-209ENST00000623242 TRBV7-4A0A0J9YYF1 115 aa2.52□□□□□ -2.01
ATRX-209ENST00000623242 KRTAP4-16G5E9R7 235 aaPredicted RBP2.52□□□□□ -2.01
ATRX-209ENST00000623242 COX7CP15954 63 aa2.52□□□□□ -2.01
ATRX-209ENST00000623242 TGP01266 2768 aa2.52□□□□□ -2.01
ATRX-209ENST00000623242 EPPK1P58107 5090 aaKnown RBP2.51□□□□□ -2.01
ATRX-209ENST00000623242 IGLV5-48A0A075B6I7 105 aa2.51□□□□□ -2.01
ATRX-209ENST00000623242 TRAV7A0A075B6U4 112 aa2.51□□□□□ -2.01
ATRX-209ENST00000623242 MP68P56378 58 aa2.51□□□□□ -2.01
ATRX-209ENST00000623242 KRTAP12-2P59991 146 aa2.51□□□□□ -2.01
ATRX-209ENST00000623242 SMCR5Q8TEV8 140 aa2.51□□□□□ -2.01
ATRX-209ENST00000623242 Q9BRP9 147 aa2.51□□□□□ -2.01
ATRX-209ENST00000623242 KMT2CQ8NEZ4 4911 aaKnown RBP2.5□□□□□ -2.01
ATRX-209ENST00000623242 A0A087WTM6 91 aa2.5□□□□□ -2.01
ATRX-209ENST00000623242 A0A096LNI7 61 aa2.5□□□□□ -2.01
ATRX-209ENST00000623242 RTL8CO15255 209 aa2.5□□□□□ -2.01
ATRX-209ENST00000623242 SPRR1AP35321 89 aa2.5□□□□□ -2.01
ATRX-209ENST00000623242 ATP5EP56381 51 aaPredicted RBP2.5□□□□□ -2.01
ATRX-209ENST00000623242 LINC00336Q6ZUF6 198 aa2.5□□□□□ -2.01
ATRX-209ENST00000623242 TMEM258P61165 79 aa2.49□□□□□ -2.01
ATRX-209ENST00000623242 ALMS1Q8TCU4 4167 aa2.49□□□□□ -2.01
ATRX-209ENST00000623242 DYNC2H1Q8NCM8 4307 aaKnown RBP2.49□□□□□ -2.01
ATRX-209ENST00000623242 KIAA1109Q2LD37 5005 aa2.48□□□□□ -2.01
ATRX-209ENST00000623242 SACSQ9NZJ4 4579 aa2.48□□□□□ -2.01
ATRX-209ENST00000623242 VPS13DQ5THJ4 4388 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms