RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 GVQW2A0A096LPI5 108 aaPredicted RBP8.88□□□□□ -0.99
CNTNAP3B-215ENST00000619138 HCG22E2RYF7 251 aa8.88□□□□□ -0.99
CNTNAP3B-215ENST00000619138 SPINK6Q6UWN8 80 aa8.88□□□□□ -0.99
CNTNAP3B-215ENST00000619138 Q8NBF4 154 aa8.87□□□□□ -0.99
CNTNAP3B-215ENST00000619138 DSCR10P59022 87 aa8.86□□□□□ -0.99
CNTNAP3B-215ENST00000619138 Q9BRP9 147 aa8.86□□□□□ -0.99
CNTNAP3B-215ENST00000619138 NDUFB1O75438 58 aa8.84□□□□□ -0.99
CNTNAP3B-215ENST00000619138 CASC2Q6XLA1 102 aa8.84□□□□□ -0.99
CNTNAP3B-215ENST00000619138 DHRS4-AS1Q9P1J3 65 aa8.84□□□□□ -0.99
CNTNAP3B-215ENST00000619138 CASC10Q5T4H9 136 aa8.84□□□□□ -0.99
CNTNAP3B-215ENST00000619138 Q6ZRX8 168 aa8.84□□□□□ -0.99
CNTNAP3B-215ENST00000619138 LINC00476Q8WZB0 136 aa8.84□□□□□ -0.99
CNTNAP3B-215ENST00000619138 RETNLBQ9BQ08 111 aa8.84□□□□□ -0.99
CNTNAP3B-215ENST00000619138 DMBT1Q9UGM3 2413 aaPredicted RBP8.84□□□□□ -0.99
CNTNAP3B-215ENST00000619138 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
CNTNAP3B-215ENST00000619138 TENM2Q9NT68 2774 aa8.81□□□□□ -1
CNTNAP3B-215ENST00000619138 SRRM2Q9UQ35 2752 aaKnown RBP8.8□□□□□ -1
CNTNAP3B-215ENST00000619138 KCNQ1DNQ9H478 68 aa8.8□□□□□ -1
CNTNAP3B-215ENST00000619138 IGLV5-48A0A075B6I7 105 aa8.79□□□□□ -1
CNTNAP3B-215ENST00000619138 IGHV6-1A0A0B4J1U7 121 aa8.75□□□□□ -1.01
CNTNAP3B-215ENST00000619138 PRR15Q8IV56 129 aa8.75□□□□□ -1.01
CNTNAP3B-215ENST00000619138 IGFL1Q6UW32 110 aa8.75□□□□□ -1.01
CNTNAP3B-215ENST00000619138 Q1T7F1 81 aa8.74□□□□□ -1.01
CNTNAP3B-215ENST00000619138 REG3GQ6UW15 175 aa8.74□□□□□ -1.01
CNTNAP3B-215ENST00000619138 IGLV1-50A0A075B6I6 118 aa8.74□□□□□ -1.01
CNTNAP3B-215ENST00000619138 KRTAP26-1Q6PEX3 210 aa8.72□□□□□ -1.01
CNTNAP3B-215ENST00000619138 IGLV8-61A0A075B6I0 122 aa8.71□□□□□ -1.02
CNTNAP3B-215ENST00000619138 Q5VV11 94 aa8.7□□□□□ -1.02
CNTNAP3B-215ENST00000619138 FLG2Q5D862 2391 aaPredicted RBP8.69□□□□□ -1.02
CNTNAP3B-215ENST00000619138 LIMD2Q9BT23 127 aa8.69□□□□□ -1.02
CNTNAP3B-215ENST00000619138 CD164Q04900 197 aa8.68□□□□□ -1.02
CNTNAP3B-215ENST00000619138 RBM12B-AS1Q9P1G2 102 aa8.68□□□□□ -1.02
CNTNAP3B-215ENST00000619138 COA5Q86WW8 74 aa8.68□□□□□ -1.02
CNTNAP3B-215ENST00000619138 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
CNTNAP3B-215ENST00000619138 ZCCHC13Q8WW36 166 aaKnown RBP8.67□□□□□ -1.02
CNTNAP3B-215ENST00000619138 CSMD3Q7Z407 3707 aa8.67□□□□□ -1.02
CNTNAP3B-215ENST00000619138 LINC00588Q9Y4M8 146 aa8.67□□□□□ -1.02
CNTNAP3B-215ENST00000619138 H3BNG1 76 aa8.67□□□□□ -1.02
CNTNAP3B-215ENST00000619138 C16orf90A8MZG2 172 aa8.66□□□□□ -1.02
CNTNAP3B-215ENST00000619138 LINC01556Q5JQF7 62 aa8.66□□□□□ -1.02
CNTNAP3B-215ENST00000619138 LY6G6CO95867 125 aa8.66□□□□□ -1.02
CNTNAP3B-215ENST00000619138 PRAC1Q96KF2 57 aa8.66□□□□□ -1.02
CNTNAP3B-215ENST00000619138 SPRR4Q96PI1 79 aa8.65□□□□□ -1.02
CNTNAP3B-215ENST00000619138 SPINK1P00995 79 aa8.64□□□□□ -1.03
CNTNAP3B-215ENST00000619138 TNP2Q05952 138 aa8.64□□□□□ -1.03
CNTNAP3B-215ENST00000619138 Q8N9P0 234 aaPredicted RBP8.64□□□□□ -1.03
CNTNAP3B-215ENST00000619138 ANK2Q01484 3957 aa8.63□□□□□ -1.03
CNTNAP3B-215ENST00000619138 PHF5AQ7RTV0 110 aaKnown RBP8.62□□□□□ -1.03
CNTNAP3B-215ENST00000619138 KRTAP7-1Q8IUC3 87 aa8.62□□□□□ -1.03
CNTNAP3B-215ENST00000619138 CYP4F30PQ9H0H9 118 aa8.62□□□□□ -1.03
CNTNAP3B-215ENST00000619138 TGP01266 2768 aa8.62□□□□□ -1.03
CNTNAP3B-215ENST00000619138 KTN1-AS1Q86SY8 53 aa8.62□□□□□ -1.03
CNTNAP3B-215ENST00000619138 COL7A1Q02388 2944 aa8.61□□□□□ -1.03
CNTNAP3B-215ENST00000619138 CMYA5Q8N3K9 4069 aa8.59□□□□□ -1.03
CNTNAP3B-215ENST00000619138 PRR26Q8N8Z3 221 aa8.59□□□□□ -1.03
CNTNAP3B-215ENST00000619138 KRTAP4-16G5E9R7 235 aaPredicted RBP8.59□□□□□ -1.03
CNTNAP3B-215ENST00000619138 CNBPP62633 177 aaKnown RBP8.58□□□□□ -1.04
CNTNAP3B-215ENST00000619138 LCE6AA0A183 80 aa8.57□□□□□ -1.04
CNTNAP3B-215ENST00000619138 LCA10Q71F78 164 aa8.57□□□□□ -1.04
CNTNAP3B-215ENST00000619138 A0A1B0GW54 56 aa8.56□□□□□ -1.04
CNTNAP3B-215ENST00000619138 LOC101927531A0A1B0GV80 90 aa8.55□□□□□ -1.04
CNTNAP3B-215ENST00000619138 DNAH10OSP0CZ25 163 aa8.55□□□□□ -1.04
CNTNAP3B-215ENST00000619138 SPRR1AP35321 89 aa8.55□□□□□ -1.04
CNTNAP3B-215ENST00000619138 ANAPC11Q9NYG5 84 aa8.55□□□□□ -1.04
CNTNAP3B-215ENST00000619138 NUPR2A6NF83 97 aa8.54□□□□□ -1.04
CNTNAP3B-215ENST00000619138 A8MWP4 228 aa8.53□□□□□ -1.04
CNTNAP3B-215ENST00000619138 ATP11AUNQ6ZP68 121 aa8.52□□□□□ -1.04
CNTNAP3B-215ENST00000619138 APLNQ9ULZ1 77 aa8.52□□□□□ -1.05
CNTNAP3B-215ENST00000619138 CIRBP-AS1Q8TBR5 109 aa8.51□□□□□ -1.05
CNTNAP3B-215ENST00000619138 HUWE1Q7Z6Z7 4374 aaKnown RBP8.5□□□□□ -1.05
CNTNAP3B-215ENST00000619138 SPINK7P58062 85 aa8.5□□□□□ -1.05
CNTNAP3B-215ENST00000619138 TLX1NBP0CAT3 122 aa8.49□□□□□ -1.05
CNTNAP3B-215ENST00000619138 KRTAP11-1Q8IUC1 163 aa8.48□□□□□ -1.05
CNTNAP3B-215ENST00000619138 KRTAP29-1A8MX34 341 aaPredicted RBP8.48□□□□□ -1.05
CNTNAP3B-215ENST00000619138 DNHD1Q96M86 4753 aa8.48□□□□□ -1.05
CNTNAP3B-215ENST00000619138 KRTAP1-5Q9BYS1 174 aa8.47□□□□□ -1.05
CNTNAP3B-215ENST00000619138 C7orf65Q6ZTY9 151 aa8.47□□□□□ -1.05
CNTNAP3B-215ENST00000619138 PLA2G2DQ9UNK4 145 aa8.46□□□□□ -1.05
CNTNAP3B-215ENST00000619138 MEGF8Q7Z7M0 2845 aa8.46□□□□□ -1.06
CNTNAP3B-215ENST00000619138 MOBPQ13875 183 aa8.45□□□□□ -1.06
CNTNAP3B-215ENST00000619138 A0A1B0GU69 56 aa8.45□□□□□ -1.06
CNTNAP3B-215ENST00000619138 SPANXA2-OT1Q8N9U9 137 aa8.45□□□□□ -1.06
CNTNAP3B-215ENST00000619138 IGKV2D-30A0A075B6S6 120 aa8.44□□□□□ -1.06
CNTNAP3B-215ENST00000619138 IGKV2-30P06310 120 aa8.44□□□□□ -1.06
CNTNAP3B-215ENST00000619138 IGLV5-37A0A075B6J1 123 aa8.43□□□□□ -1.06
CNTNAP3B-215ENST00000619138 MMP24-AS1A0A0U1RRL7 71 aa8.43□□□□□ -1.06
CNTNAP3B-215ENST00000619138 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
CNTNAP3B-215ENST00000619138 DNAH3Q8TD57 4116 aa8.42□□□□□ -1.06
CNTNAP3B-215ENST00000619138 H3BS24 57 aa8.42□□□□□ -1.06
CNTNAP3B-215ENST00000619138 Q75L30 129 aa8.41□□□□□ -1.06
CNTNAP3B-215ENST00000619138 LINC00472Q9H8W2 130 aa8.41□□□□□ -1.06
CNTNAP3B-215ENST00000619138 NBDYA0A0U1RRE5 68 aa8.41□□□□□ -1.06
CNTNAP3B-215ENST00000619138 ADM2Q7Z4H4 148 aa8.41□□□□□ -1.06
CNTNAP3B-215ENST00000619138 H3BPC8 53 aa8.41□□□□□ -1.06
CNTNAP3B-215ENST00000619138 FBN3Q75N90 2809 aa8.4□□□□□ -1.06
CNTNAP3B-215ENST00000619138 C9orf163Q8N9P6 203 aa8.4□□□□□ -1.06
CNTNAP3B-215ENST00000619138 CDC42SE1Q9NRR8 79 aa8.4□□□□□ -1.06
CNTNAP3B-215ENST00000619138 IGLV7-46A0A075B6I9 117 aa8.39□□□□□ -1.07
CNTNAP3B-215ENST00000619138 DNAH9Q9NYC9 4486 aa8.39□□□□□ -1.07
CNTNAP3B-215ENST00000619138 LINC00313P59037 77 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms