RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 AKAP9Q99996 3911 aa6.86□□□□□ -1.31
LIG1-220ENST00000601091 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.86□□□□□ -1.31
LIG1-220ENST00000601091 Q8N9P0 234 aaPredicted RBP6.86□□□□□ -1.31
LIG1-220ENST00000601091 NBEAL1Q6ZS30 2694 aa6.85□□□□□ -1.31
LIG1-220ENST00000601091 NDUFB1O75438 58 aa6.84□□□□□ -1.31
LIG1-220ENST00000601091 Q8NDZ9 215 aa6.84□□□□□ -1.31
LIG1-220ENST00000601091 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
LIG1-220ENST00000601091 NOTCH1P46531 2555 aa6.83□□□□□ -1.32
LIG1-220ENST00000601091 A0A096LNI7 61 aa6.83□□□□□ -1.32
LIG1-220ENST00000601091 C15orf56Q8N910 161 aa6.82□□□□□ -1.32
LIG1-220ENST00000601091 NBPF19A0A087WUL8 3843 aa6.81□□□□□ -1.32
LIG1-220ENST00000601091 MIR22HGQ0VDD5 57 aa6.81□□□□□ -1.32
LIG1-220ENST00000601091 Q6ZRX8 168 aa6.8□□□□□ -1.32
LIG1-220ENST00000601091 A0A1B0GW54 56 aa6.8□□□□□ -1.32
LIG1-220ENST00000601091 DNAH10OSP0CZ25 163 aa6.8□□□□□ -1.32
LIG1-220ENST00000601091 WFDC13Q8IUB5 93 aa6.8□□□□□ -1.32
LIG1-220ENST00000601091 KCNQ1DNQ9H478 68 aa6.8□□□□□ -1.32
LIG1-220ENST00000601091 ZNF469Q96JG9 3925 aaPredicted RBP6.79□□□□□ -1.32
LIG1-220ENST00000601091 PKD1L1Q8TDX9 2849 aa6.78□□□□□ -1.32
LIG1-220ENST00000601091 KRTAP10-11P60412 298 aa6.78□□□□□ -1.32
LIG1-220ENST00000601091 KRTAP24-1Q3LI83 254 aa6.78□□□□□ -1.32
LIG1-220ENST00000601091 MAST4O15021 2626 aa6.77□□□□□ -1.33
LIG1-220ENST00000601091 COL6A5A8TX70 2615 aa6.77□□□□□ -1.33
LIG1-220ENST00000601091 Q8NBF4 154 aa6.76□□□□□ -1.33
LIG1-220ENST00000601091 ROMO1P60602 79 aa6.76□□□□□ -1.33
LIG1-220ENST00000601091 A0A087WSZ3 146 aa6.76□□□□□ -1.33
LIG1-220ENST00000601091 PLA2G1BP04054 148 aaKnown RBP6.76□□□□□ -1.33
LIG1-220ENST00000601091 PRLHP81277 87 aa6.76□□□□□ -1.33
LIG1-220ENST00000601091 ST20-AS1Q8NBB2 130 aa6.75□□□□□ -1.33
LIG1-220ENST00000601091 IGLV9-49A0A0B4J1Y8 123 aa6.75□□□□□ -1.33
LIG1-220ENST00000601091 SPINK7P58062 85 aa6.75□□□□□ -1.33
LIG1-220ENST00000601091 SMIM29Q86T20 159 aa6.75□□□□□ -1.33
LIG1-220ENST00000601091 OCR1Q9BZK8 76 aa6.75□□□□□ -1.33
LIG1-220ENST00000601091 Q8N377 158 aa6.74□□□□□ -1.33
LIG1-220ENST00000601091 Q9BRP9 147 aa6.74□□□□□ -1.33
LIG1-220ENST00000601091 FAM168BA1KXE4 195 aa6.74□□□□□ -1.33
LIG1-220ENST00000601091 IGLV1-50A0A075B6I6 118 aa6.74□□□□□ -1.33
LIG1-220ENST00000601091 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
LIG1-220ENST00000601091 LUZP6Q538Z0 58 aa6.73□□□□□ -1.33
LIG1-220ENST00000601091 DEFB116Q30KQ4 102 aa6.73□□□□□ -1.33
LIG1-220ENST00000601091 TENM1Q9UKZ4 2725 aa6.72□□□□□ -1.33
LIG1-220ENST00000601091 TLX1NBP0CAT3 122 aa6.71□□□□□ -1.33
LIG1-220ENST00000601091 MGAM2Q2M2H8 2515 aa6.71□□□□□ -1.34
LIG1-220ENST00000601091 TNP2Q05952 138 aa6.7□□□□□ -1.34
LIG1-220ENST00000601091 A0A0G2JQZ4 141 aa6.69□□□□□ -1.34
LIG1-220ENST00000601091 A0A1W2PNN7 141 aa6.69□□□□□ -1.34
LIG1-220ENST00000601091 STAB1Q9NY15 2570 aa6.68□□□□□ -1.34
LIG1-220ENST00000601091 K7ERS5 55 aa6.68□□□□□ -1.34
LIG1-220ENST00000601091 IGKV4-1P06312 121 aa6.68□□□□□ -1.34
LIG1-220ENST00000601091 CHTF8P0CG12 524 aa6.68□□□□□ -1.34
LIG1-220ENST00000601091 IGLV5-48A0A075B6I7 105 aa6.67□□□□□ -1.34
LIG1-220ENST00000601091 Q6ZR54 194 aa6.66□□□□□ -1.34
LIG1-220ENST00000601091 COA5Q86WW8 74 aa6.66□□□□□ -1.34
LIG1-220ENST00000601091 CASC10Q5T4H9 136 aa6.66□□□□□ -1.34
LIG1-220ENST00000601091 NSD1Q96L73 2696 aaPredicted RBP6.65□□□□□ -1.34
LIG1-220ENST00000601091 A0A1W2PNM2 257 aa6.65□□□□□ -1.35
LIG1-220ENST00000601091 FBN1P35555 2871 aaKnown RBP6.65□□□□□ -1.35
LIG1-220ENST00000601091 NUPR2A6NF83 97 aa6.64□□□□□ -1.35
LIG1-220ENST00000601091 K7EQZ3 153 aa6.64□□□□□ -1.35
LIG1-220ENST00000601091 KRTAP26-1Q6PEX3 210 aa6.64□□□□□ -1.35
LIG1-220ENST00000601091 NDUFAF8A1L188 74 aa6.63□□□□□ -1.35
LIG1-220ENST00000601091 IGLV5-37A0A075B6J1 123 aa6.63□□□□□ -1.35
LIG1-220ENST00000601091 TRRAPQ9Y4A5 3859 aa6.63□□□□□ -1.35
LIG1-220ENST00000601091 H0Y9P7 68 aa6.62□□□□□ -1.35
LIG1-220ENST00000601091 K7EIL1 84 aa6.62□□□□□ -1.35
LIG1-220ENST00000601091 SPINT4Q6UDR6 99 aa6.62□□□□□ -1.35
LIG1-220ENST00000601091 IGFL1Q6UW32 110 aa6.61□□□□□ -1.35
LIG1-220ENST00000601091 A8MWP4 228 aa6.61□□□□□ -1.35
LIG1-220ENST00000601091 TENM3Q9P273 2699 aa6.6□□□□□ -1.35
LIG1-220ENST00000601091 SPINK6Q6UWN8 80 aa6.59□□□□□ -1.35
LIG1-220ENST00000601091 C8orf17Q9NRJ1 99 aa6.59□□□□□ -1.35
LIG1-220ENST00000601091 RPL37AP61513 92 aaKnown RBP6.58□□□□□ -1.36
LIG1-220ENST00000601091 PCOTHQ58A44 107 aa6.58□□□□□ -1.36
LIG1-220ENST00000601091 SPRR1AP35321 89 aa6.57□□□□□ -1.36
LIG1-220ENST00000601091 OTOGQ6ZRI0 2925 aa6.56□□□□□ -1.36
LIG1-220ENST00000601091 SRRM2Q9UQ35 2752 aaKnown RBP6.56□□□□□ -1.36
LIG1-220ENST00000601091 NBDYA0A0U1RRE5 68 aa6.56□□□□□ -1.36
LIG1-220ENST00000601091 SPRR4Q96PI1 79 aa6.56□□□□□ -1.36
LIG1-220ENST00000601091 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
LIG1-220ENST00000601091 ASB16-AS1Q495Z4 193 aa6.55□□□□□ -1.36
LIG1-220ENST00000601091 H3BPC8 53 aa6.55□□□□□ -1.36
LIG1-220ENST00000601091 LINC01558Q9Y6Z2 57 aa6.55□□□□□ -1.36
LIG1-220ENST00000601091 CSMD3Q7Z407 3707 aa6.54□□□□□ -1.36
LIG1-220ENST00000601091 C9orf163Q8N9P6 203 aa6.53□□□□□ -1.36
LIG1-220ENST00000601091 DSCR10P59022 87 aa6.53□□□□□ -1.36
LIG1-220ENST00000601091 TENM4Q6N022 2769 aa6.53□□□□□ -1.36
LIG1-220ENST00000601091 FLG2Q5D862 2391 aaPredicted RBP6.52□□□□□ -1.37
LIG1-220ENST00000601091 IGLV5-52A0A0A0MRZ9 124 aa6.52□□□□□ -1.37
LIG1-220ENST00000601091 TP53AIP1Q9HCN2 124 aa6.51□□□□□ -1.37
LIG1-220ENST00000601091 CIRBP-AS1Q8TBR5 109 aa6.5□□□□□ -1.37
LIG1-220ENST00000601091 LY6G6CO95867 125 aa6.5□□□□□ -1.37
LIG1-220ENST00000601091 RTL8CO15255 209 aa6.48□□□□□ -1.37
LIG1-220ENST00000601091 APLNQ9ULZ1 77 aa6.48□□□□□ -1.37
LIG1-220ENST00000601091 KRTAP4-16G5E9R7 235 aaPredicted RBP6.48□□□□□ -1.37
LIG1-220ENST00000601091 ZCCHC13Q8WW36 166 aaKnown RBP6.48□□□□□ -1.37
LIG1-220ENST00000601091 C20orf166-AS1Q96NR2 134 aa6.47□□□□□ -1.37
LIG1-220ENST00000601091 SPANXA2-OT1Q8N9U9 137 aa6.47□□□□□ -1.37
LIG1-220ENST00000601091 A0A1B0GU69 56 aa6.46□□□□□ -1.38
LIG1-220ENST00000601091 TENM2Q9NT68 2774 aa6.46□□□□□ -1.38
LIG1-220ENST00000601091 COL7A1Q02388 2944 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms