RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 GHRHP01286 108 aa7.9□□□□□ -1.14
SCAF1-202ENST00000595242 CHTF8P0CG12 524 aa7.9□□□□□ -1.14
SCAF1-202ENST00000595242 Q6ZQY7 126 aa7.89□□□□□ -1.15
SCAF1-202ENST00000595242 MRPL55Q7Z7F7 128 aaKnown RBP7.89□□□□□ -1.15
SCAF1-202ENST00000595242 SCGB1A1P11684 91 aa7.88□□□□□ -1.15
SCAF1-202ENST00000595242 SPINK6Q6UWN8 80 aa7.88□□□□□ -1.15
SCAF1-202ENST00000595242 SPACA4Q8TDM5 124 aa7.88□□□□□ -1.15
SCAF1-202ENST00000595242 FAM19A5Q7Z5A7 132 aaPredicted RBP7.87□□□□□ -1.15
SCAF1-202ENST00000595242 PLAC8Q9NZF1 115 aa7.87□□□□□ -1.15
SCAF1-202ENST00000595242 Q6ZRX8 168 aa7.86□□□□□ -1.15
SCAF1-202ENST00000595242 C14orf132Q9NPU4 83 aa7.86□□□□□ -1.15
SCAF1-202ENST00000595242 B5MCH6 92 aa7.85□□□□□ -1.15
SCAF1-202ENST00000595242 DHRS4-AS1Q9P1J3 65 aa7.85□□□□□ -1.15
SCAF1-202ENST00000595242 MT-ATP8P03928 68 aa7.84□□□□□ -1.15
SCAF1-202ENST00000595242 FSIP2Q5CZC0 6907 aa7.83□□□□□ -1.16
SCAF1-202ENST00000595242 LOC110117498A0A087WWA1 95 aa7.83□□□□□ -1.16
SCAF1-202ENST00000595242 A0A1W2PNN7 141 aa7.83□□□□□ -1.16
SCAF1-202ENST00000595242 CCKP06307 115 aa7.83□□□□□ -1.16
SCAF1-202ENST00000595242 LINC00474Q9P2X8 69 aa7.83□□□□□ -1.16
SCAF1-202ENST00000595242 ETDCA0A1B0GVM5 59 aa7.82□□□□□ -1.16
SCAF1-202ENST00000595242 RPL37AP8A6NKH3 93 aa7.82□□□□□ -1.16
SCAF1-202ENST00000595242 C21orf62-AS1Q17RA5 79 aa7.82□□□□□ -1.16
SCAF1-202ENST00000595242 GAGE2AQ6NT46 116 aa7.82□□□□□ -1.16
SCAF1-202ENST00000595242 IGKV2-24A0A0C4DH68 120 aa7.81□□□□□ -1.16
SCAF1-202ENST00000595242 Q6Q795 121 aa7.81□□□□□ -1.16
SCAF1-202ENST00000595242 PDE6GP18545 87 aa7.8□□□□□ -1.16
SCAF1-202ENST00000595242 RBM3P98179 157 aaKnown RBP7.8□□□□□ -1.16
SCAF1-202ENST00000595242 LINC00643Q86TS7 51 aa7.8□□□□□ -1.16
SCAF1-202ENST00000595242 Q9BRP9 147 aa7.8□□□□□ -1.16
SCAF1-202ENST00000595242 TRBV7-4A0A0J9YYF1 115 aa7.79□□□□□ -1.16
SCAF1-202ENST00000595242 PCP4P48539 62 aa7.79□□□□□ -1.16
SCAF1-202ENST00000595242 LINC01547P58512 204 aaPredicted RBP7.79□□□□□ -1.16
SCAF1-202ENST00000595242 Q6ZQT0 140 aa7.79□□□□□ -1.16
SCAF1-202ENST00000595242 SMCR5Q8TEV8 140 aa7.79□□□□□ -1.16
SCAF1-202ENST00000595242 LAMTOR3Q9UHA4 124 aa7.79□□□□□ -1.16
SCAF1-202ENST00000595242 IGLV5-48A0A075B6I7 105 aa7.78□□□□□ -1.16
SCAF1-202ENST00000595242 TRBV7-7A0A0K0K1E9 115 aa7.78□□□□□ -1.16
SCAF1-202ENST00000595242 NDUFV3P56181 108 aaKnown RBP7.78□□□□□ -1.16
SCAF1-202ENST00000595242 H0Y9J4 135 aa7.76□□□□□ -1.17
SCAF1-202ENST00000595242 Q8N377 158 aa7.76□□□□□ -1.17
SCAF1-202ENST00000595242 LINC00846Q9NV44 126 aa7.76□□□□□ -1.17
SCAF1-202ENST00000595242 DSCR8Q96T75 97 aa7.75□□□□□ -1.17
SCAF1-202ENST00000595242 IMUPQ9GZP8 106 aa7.75□□□□□ -1.17
SCAF1-202ENST00000595242 A0A1B0GV72 72 aa7.74□□□□□ -1.17
SCAF1-202ENST00000595242 Q6JHZ5 121 aa7.74□□□□□ -1.17
SCAF1-202ENST00000595242 PHF5AQ7RTV0 110 aaKnown RBP7.74□□□□□ -1.17
SCAF1-202ENST00000595242 CRCT1Q9UGL9 99 aa7.74□□□□□ -1.17
SCAF1-202ENST00000595242 PRR4Q16378 134 aa7.73□□□□□ -1.17
SCAF1-202ENST00000595242 UBE2BP63146 152 aa7.72□□□□□ -1.17
SCAF1-202ENST00000595242 KRTAP11-1Q8IUC1 163 aa7.72□□□□□ -1.17
SCAF1-202ENST00000595242 PSORS1C2Q9UIG4 136 aa7.72□□□□□ -1.17
SCAF1-202ENST00000595242 ERC2-IT1O76042 136 aa7.71□□□□□ -1.18
SCAF1-202ENST00000595242 FAM19A1Q7Z5A9 133 aa7.71□□□□□ -1.18
SCAF1-202ENST00000595242 ATP5EP2Q5VTU8 51 aa7.7□□□□□ -1.18
SCAF1-202ENST00000595242 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
SCAF1-202ENST00000595242 PRR26Q8N8Z3 221 aa7.69□□□□□ -1.18
SCAF1-202ENST00000595242 ST20-AS1Q8NBB2 130 aa7.69□□□□□ -1.18
SCAF1-202ENST00000595242 SPRR1BP22528 89 aa7.68□□□□□ -1.18
SCAF1-202ENST00000595242 PRLHP81277 87 aa7.68□□□□□ -1.18
SCAF1-202ENST00000595242 A0A1B0GW54 56 aa7.67□□□□□ -1.18
SCAF1-202ENST00000595242 BCE1O60756 84 aa7.67□□□□□ -1.18
SCAF1-202ENST00000595242 SMIM29Q86T20 159 aa7.67□□□□□ -1.18
SCAF1-202ENST00000595242 DEFB105AQ8NG35 78 aa7.67□□□□□ -1.18
SCAF1-202ENST00000595242 UBL5Q9BZL1 73 aa7.67□□□□□ -1.18
SCAF1-202ENST00000595242 LCE2DQ5TA82 110 aaPredicted RBP7.66□□□□□ -1.18
SCAF1-202ENST00000595242 IGLV8-61A0A075B6I0 122 aa7.65□□□□□ -1.18
SCAF1-202ENST00000595242 Q6ZVQ6 151 aa7.63□□□□□ -1.19
SCAF1-202ENST00000595242 C3orf22Q8N5N4 141 aa7.63□□□□□ -1.19
SCAF1-202ENST00000595242 HIGD2AQ9BW72 106 aa7.63□□□□□ -1.19
SCAF1-202ENST00000595242 UBE2AP49459 152 aa7.62□□□□□ -1.19
SCAF1-202ENST00000595242 HIST1H4AP62805 103 aaKnown RBP7.61□□□□□ -1.19
SCAF1-202ENST00000595242 C1orf137Q5JT78 98 aa7.61□□□□□ -1.19
SCAF1-202ENST00000595242 Q8NBF4 154 aa7.61□□□□□ -1.19
SCAF1-202ENST00000595242 IGKV3D-7A0A0C4DH55 119 aa7.6□□□□□ -1.19
SCAF1-202ENST00000595242 F8WEM9 126 aa7.6□□□□□ -1.19
SCAF1-202ENST00000595242 SPRR4Q96PI1 79 aa7.6□□□□□ -1.19
SCAF1-202ENST00000595242 A0A1W2PNM2 257 aa7.59□□□□□ -1.19
SCAF1-202ENST00000595242 CXCL6P80162 114 aa7.59□□□□□ -1.19
SCAF1-202ENST00000595242 FAM236AA0A1B0GUQ0 79 aa7.57□□□□□ -1.2
SCAF1-202ENST00000595242 FAM236BA0A1B0GV22 79 aa7.57□□□□□ -1.2
SCAF1-202ENST00000595242 ANAPC13Q9BS18 74 aa7.56□□□□□ -1.2
SCAF1-202ENST00000595242 MUC17Q685J3 4493 aa7.56□□□□□ -1.2
SCAF1-202ENST00000595242 CRYGAP11844 174 aa7.55□□□□□ -1.2
SCAF1-202ENST00000595242 LINC00483Q53H64 154 aa7.55□□□□□ -1.2
SCAF1-202ENST00000595242 IGFL1Q6UW32 110 aa7.55□□□□□ -1.2
SCAF1-202ENST00000595242 IGLV7-43P04211 117 aa7.54□□□□□ -1.2
SCAF1-202ENST00000595242 ZNF706Q9Y5V0 76 aaPredicted RBP7.54□□□□□ -1.2
SCAF1-202ENST00000595242 ZNF861PO60384 105 aa7.52□□□□□ -1.21
SCAF1-202ENST00000595242 KRTAP1-4P0C5Y4 121 aa7.52□□□□□ -1.21
SCAF1-202ENST00000595242 NREPQ16612 68 aa7.52□□□□□ -1.21
SCAF1-202ENST00000595242 A0A087WVE0 104 aa7.51□□□□□ -1.21
SCAF1-202ENST00000595242 ATOX1O00244 68 aa7.51□□□□□ -1.21
SCAF1-202ENST00000595242 BPY2O14599 106 aa7.46□□□□□ -1.22
SCAF1-202ENST00000595242 IGKV4-1P06312 121 aa7.45□□□□□ -1.22
SCAF1-202ENST00000595242 A0A0G2JQZ4 141 aa7.43□□□□□ -1.22
SCAF1-202ENST00000595242 A0A087WSZ3 146 aa7.42□□□□□ -1.22
SCAF1-202ENST00000595242 COX7CP15954 63 aa7.42□□□□□ -1.22
SCAF1-202ENST00000595242 UQCRQO14949 82 aa7.41□□□□□ -1.22
SCAF1-202ENST00000595242 DSCR10P59022 87 aa7.41□□□□□ -1.22
SCAF1-202ENST00000595242 SERP2Q8N6R1 65 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms