RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 HAMPP81172 84 aa8.07□□□□□ -1.12
CDK5RAP3-217ENST00000580287 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
CDK5RAP3-217ENST00000580287 PANO1I0J062 215 aa8.07□□□□□ -1.12
CDK5RAP3-217ENST00000580287 SCXQ7RTU7 201 aa8.06□□□□□ -1.12
CDK5RAP3-217ENST00000580287 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
CDK5RAP3-217ENST00000580287 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
CDK5RAP3-217ENST00000580287 KCNQ1DNQ9H478 68 aa8.06□□□□□ -1.12
CDK5RAP3-217ENST00000580287 SERP1Q9Y6X1 66 aa8.06□□□□□ -1.12
CDK5RAP3-217ENST00000580287 DNAH6Q9C0G6 4158 aa8.05□□□□□ -1.12
CDK5RAP3-217ENST00000580287 FAT2Q9NYQ8 4349 aa8.05□□□□□ -1.12
CDK5RAP3-217ENST00000580287 A0A1W2PNN7 141 aa8.05□□□□□ -1.12
CDK5RAP3-217ENST00000580287 KLKP1Q107X0 134 aa8.04□□□□□ -1.12
CDK5RAP3-217ENST00000580287 SNURFQ9Y675 71 aa8.04□□□□□ -1.12
CDK5RAP3-217ENST00000580287 H3BQ85 93 aa8.04□□□□□ -1.12
CDK5RAP3-217ENST00000580287 KRTAP10-2P60368 255 aa8.03□□□□□ -1.12
CDK5RAP3-217ENST00000580287 DNAH11Q96DT5 4516 aa8.03□□□□□ -1.12
CDK5RAP3-217ENST00000580287 ETDCA0A1B0GVM5 59 aa8.03□□□□□ -1.12
CDK5RAP3-217ENST00000580287 C16orf90A8MZG2 172 aa8.02□□□□□ -1.12
CDK5RAP3-217ENST00000580287 CXCL6P80162 114 aa8.02□□□□□ -1.12
CDK5RAP3-217ENST00000580287 IGLV1-50A0A075B6I6 118 aa8.02□□□□□ -1.13
CDK5RAP3-217ENST00000580287 LCE6AA0A183 80 aa8.01□□□□□ -1.13
CDK5RAP3-217ENST00000580287 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.01□□□□□ -1.13
CDK5RAP3-217ENST00000580287 F8WEM9 126 aa8□□□□□ -1.13
CDK5RAP3-217ENST00000580287 PDE6GP18545 87 aa8□□□□□ -1.13
CDK5RAP3-217ENST00000580287 IGLV5-52A0A0A0MRZ9 124 aa7.99□□□□□ -1.13
CDK5RAP3-217ENST00000580287 Q6ZRX8 168 aa7.99□□□□□ -1.13
CDK5RAP3-217ENST00000580287 PLA2G1BP04054 148 aaKnown RBP7.99□□□□□ -1.13
CDK5RAP3-217ENST00000580287 DNAH5Q8TE73 4624 aa7.99□□□□□ -1.13
CDK5RAP3-217ENST00000580287 IGLV5-37A0A075B6J1 123 aa7.99□□□□□ -1.13
CDK5RAP3-217ENST00000580287 Q8N9L7 120 aa7.99□□□□□ -1.13
CDK5RAP3-217ENST00000580287 PKD1P98161 4303 aa7.98□□□□□ -1.13
CDK5RAP3-217ENST00000580287 UBE2BP63146 152 aa7.98□□□□□ -1.13
CDK5RAP3-217ENST00000580287 TRBV7-4A0A0J9YYF1 115 aa7.98□□□□□ -1.13
CDK5RAP3-217ENST00000580287 Q9BRP9 147 aa7.98□□□□□ -1.13
CDK5RAP3-217ENST00000580287 DHRS4-AS1Q9P1J3 65 aa7.97□□□□□ -1.13
CDK5RAP3-217ENST00000580287 RYR2Q92736 4967 aa7.97□□□□□ -1.13
CDK5RAP3-217ENST00000580287 FP248Q71RG6 208 aaPredicted RBP7.97□□□□□ -1.13
CDK5RAP3-217ENST00000580287 PHF5AQ7RTV0 110 aaKnown RBP7.97□□□□□ -1.13
CDK5RAP3-217ENST00000580287 KRTAP11-1Q8IUC1 163 aa7.96□□□□□ -1.14
CDK5RAP3-217ENST00000580287 ST20-AS1Q8NBB2 130 aa7.96□□□□□ -1.14
CDK5RAP3-217ENST00000580287 REG3GQ6UW15 175 aa7.96□□□□□ -1.14
CDK5RAP3-217ENST00000580287 Q8N377 158 aa7.96□□□□□ -1.14
CDK5RAP3-217ENST00000580287 PKHD1P08F94 4074 aa7.95□□□□□ -1.14
CDK5RAP3-217ENST00000580287 KRTAP4-16G5E9R7 235 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-217ENST00000580287 SMIM26A0A096LP01 95 aa7.95□□□□□ -1.14
CDK5RAP3-217ENST00000580287 C8orf87E5RJ46 101 aa7.95□□□□□ -1.14
CDK5RAP3-217ENST00000580287 SPRR1AP35321 89 aa7.94□□□□□ -1.14
CDK5RAP3-217ENST00000580287 NREPQ16612 68 aa7.94□□□□□ -1.14
CDK5RAP3-217ENST00000580287 FAM30AQ9NZY2 134 aa7.94□□□□□ -1.14
CDK5RAP3-217ENST00000580287 NDUFC1O43677 76 aa7.93□□□□□ -1.14
CDK5RAP3-217ENST00000580287 ERC2-IT1O76042 136 aa7.93□□□□□ -1.14
CDK5RAP3-217ENST00000580287 SPACA4Q8TDM5 124 aa7.93□□□□□ -1.14
CDK5RAP3-217ENST00000580287 A0A0G2JQZ4 141 aa7.92□□□□□ -1.14
CDK5RAP3-217ENST00000580287 RYR3Q15413 4870 aa7.92□□□□□ -1.14
CDK5RAP3-217ENST00000580287 DNAH8Q96JB1 4490 aa7.92□□□□□ -1.14
CDK5RAP3-217ENST00000580287 PRLHP81277 87 aa7.92□□□□□ -1.14
CDK5RAP3-217ENST00000580287 LINC00474Q9P2X8 69 aa7.92□□□□□ -1.14
CDK5RAP3-217ENST00000580287 BPY2O14599 106 aa7.91□□□□□ -1.14
CDK5RAP3-217ENST00000580287 Q75L30 129 aa7.91□□□□□ -1.14
CDK5RAP3-217ENST00000580287 TMEM254Q8TBM7 123 aa7.91□□□□□ -1.14
CDK5RAP3-217ENST00000580287 RBM12B-AS1Q9P1G2 102 aa7.91□□□□□ -1.14
CDK5RAP3-217ENST00000580287 KRTAP10-1P60331 282 aa7.9□□□□□ -1.15
CDK5RAP3-217ENST00000580287 HIGD2AQ9BW72 106 aa7.9□□□□□ -1.15
CDK5RAP3-217ENST00000580287 ATP5EP56381 51 aaPredicted RBP7.89□□□□□ -1.15
CDK5RAP3-217ENST00000580287 IGKV4-1P06312 121 aa7.88□□□□□ -1.15
CDK5RAP3-217ENST00000580287 C1orf137Q5JT78 98 aa7.86□□□□□ -1.15
CDK5RAP3-217ENST00000580287 LRP1BQ9NZR2 4599 aa7.86□□□□□ -1.15
CDK5RAP3-217ENST00000580287 IGLV5-48A0A075B6I7 105 aa7.85□□□□□ -1.15
CDK5RAP3-217ENST00000580287 FAM229BQ4G0N7 80 aa7.85□□□□□ -1.15
CDK5RAP3-217ENST00000580287 OCR1Q9BZK8 76 aa7.85□□□□□ -1.15
CDK5RAP3-217ENST00000580287 CIRBP-AS1Q8TBR5 109 aa7.84□□□□□ -1.15
CDK5RAP3-217ENST00000580287 BRK1Q8WUW1 75 aa7.83□□□□□ -1.16
CDK5RAP3-217ENST00000580287 A0A1W2PNM2 257 aa7.83□□□□□ -1.16
CDK5RAP3-217ENST00000580287 PLAC8Q9NZF1 115 aa7.82□□□□□ -1.16
CDK5RAP3-217ENST00000580287 UBE2AP49459 152 aa7.81□□□□□ -1.16
CDK5RAP3-217ENST00000580287 DYNC1H1Q14204 4646 aaKnown RBP7.81□□□□□ -1.16
CDK5RAP3-217ENST00000580287 A0A1B0GVY2 172 aa7.8□□□□□ -1.16
CDK5RAP3-217ENST00000580287 MPLKIPQ8TAP9 179 aa7.8□□□□□ -1.16
CDK5RAP3-217ENST00000580287 DEFB116Q30KQ4 102 aa7.79□□□□□ -1.16
CDK5RAP3-217ENST00000580287 SMIM29Q86T20 159 aa7.79□□□□□ -1.16
CDK5RAP3-217ENST00000580287 Q8NBF4 154 aa7.79□□□□□ -1.16
CDK5RAP3-217ENST00000580287 PSORS1C2Q9UIG4 136 aa7.79□□□□□ -1.16
CDK5RAP3-217ENST00000580287 Q6ZSA8 131 aa7.78□□□□□ -1.16
CDK5RAP3-217ENST00000580287 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
CDK5RAP3-217ENST00000580287 IGFL1Q6UW32 110 aa7.75□□□□□ -1.17
CDK5RAP3-217ENST00000580287 SPRR4Q96PI1 79 aa7.72□□□□□ -1.17
CDK5RAP3-217ENST00000580287 SMR3BP02814 79 aaPredicted RBP7.71□□□□□ -1.17
CDK5RAP3-217ENST00000580287 FAT1Q14517 4588 aa7.71□□□□□ -1.17
CDK5RAP3-217ENST00000580287 A0A1B0GW54 56 aa7.71□□□□□ -1.18
CDK5RAP3-217ENST00000580287 H0Y9J4 135 aa7.71□□□□□ -1.18
CDK5RAP3-217ENST00000580287 K7EQZ3 153 aa7.71□□□□□ -1.18
CDK5RAP3-217ENST00000580287 KRTAP13-1Q8IUC0 172 aa7.71□□□□□ -1.18
CDK5RAP3-217ENST00000580287 VPS13BQ7Z7G8 4022 aa7.7□□□□□ -1.18
CDK5RAP3-217ENST00000580287 A0A087WSZ3 146 aa7.7□□□□□ -1.18
CDK5RAP3-217ENST00000580287 hDV103S1A0JD37 113 aa7.69□□□□□ -1.18
CDK5RAP3-217ENST00000580287 DSCR10P59022 87 aa7.69□□□□□ -1.18
CDK5RAP3-217ENST00000580287 APOBP04114 4563 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-217ENST00000580287 ANAPC11Q9NYG5 84 aa7.68□□□□□ -1.18
CDK5RAP3-217ENST00000580287 RPL37AP61513 92 aaKnown RBP7.66□□□□□ -1.18
CDK5RAP3-217ENST00000580287 ZCCHC13Q8WW36 166 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms