RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 TMEM223A0PJW6 202 aa3.82□□□□□ -1.8
CACNA1A-203ENST00000573891 CNBPP62633 177 aaKnown RBP3.82□□□□□ -1.8
CACNA1A-203ENST00000573891 C20orf197Q8N268 126 aa3.82□□□□□ -1.8
CACNA1A-203ENST00000573891 KRTAP9-3Q9BYQ3 159 aa3.82□□□□□ -1.8
CACNA1A-203ENST00000573891 TRAV12-1A0A0B4J245 112 aa3.81□□□□□ -1.8
CACNA1A-203ENST00000573891 SLPIP03973 132 aa3.81□□□□□ -1.8
CACNA1A-203ENST00000573891 PLNP26678 52 aa3.81□□□□□ -1.8
CACNA1A-203ENST00000573891 CLPSL2Q6UWE3 100 aa3.81□□□□□ -1.8
CACNA1A-203ENST00000573891 NTM-AS1Q6ZSK4 140 aa3.81□□□□□ -1.8
CACNA1A-203ENST00000573891 A0A087WYN8 130 aa3.8□□□□□ -1.8
CACNA1A-203ENST00000573891 TRBV6-1A0A0K0K1D8 114 aa3.8□□□□□ -1.8
CACNA1A-203ENST00000573891 hDV103S1A0JD37 113 aa3.8□□□□□ -1.8
CACNA1A-203ENST00000573891 FAM229BQ4G0N7 80 aa3.8□□□□□ -1.8
CACNA1A-203ENST00000573891 S100A7L2Q5SY68 101 aa3.8□□□□□ -1.8
CACNA1A-203ENST00000573891 Q6ZRP5 223 aa3.8□□□□□ -1.8
CACNA1A-203ENST00000573891 LINC00269Q8N2A0 174 aa3.8□□□□□ -1.8
CACNA1A-203ENST00000573891 SPACA4Q8TDM5 124 aa3.8□□□□□ -1.8
CACNA1A-203ENST00000573891 PLAC8Q9NZF1 115 aa3.8□□□□□ -1.8
CACNA1A-203ENST00000573891 IGHV3-64A0A075B6Q5 118 aa3.79□□□□□ -1.8
CACNA1A-203ENST00000573891 CHTF8P0CG12 524 aa3.79□□□□□ -1.8
CACNA1A-203ENST00000573891 SPANXN1Q5VSR9 72 aa3.79□□□□□ -1.8
CACNA1A-203ENST00000573891 FAM218AQ96MZ4 157 aa3.79□□□□□ -1.8
CACNA1A-203ENST00000573891 IGLV10-54A0A075B6I4 117 aa3.78□□□□□ -1.8
CACNA1A-203ENST00000573891 HIGD1CA8MV81 97 aa3.78□□□□□ -1.8
CACNA1A-203ENST00000573891 F8WEM9 126 aa3.78□□□□□ -1.8
CACNA1A-203ENST00000573891 REG3AQ06141 175 aa3.78□□□□□ -1.8
CACNA1A-203ENST00000573891 C20orf203Q8NBC4 194 aa3.78□□□□□ -1.8
CACNA1A-203ENST00000573891 TMEM141Q96I45 108 aa3.78□□□□□ -1.8
CACNA1A-203ENST00000573891 OBSCN-AS1Q96MR7 158 aa3.78□□□□□ -1.8
CACNA1A-203ENST00000573891 KIF25-AS1Q9Y6Z4 181 aa3.78□□□□□ -1.8
CACNA1A-203ENST00000573891 A0A1B0GUV1 79 aa3.77□□□□□ -1.81
CACNA1A-203ENST00000573891 FCER1GP30273 86 aa3.77□□□□□ -1.81
CACNA1A-203ENST00000573891 C7orf33Q8WU49 177 aa3.77□□□□□ -1.81
CACNA1A-203ENST00000573891 CLEC2BQ92478 149 aa3.77□□□□□ -1.81
CACNA1A-203ENST00000573891 TTTY13Q9BZ97 58 aa3.77□□□□□ -1.81
CACNA1A-203ENST00000573891 IGLV4-60A0A075B6I1 120 aa3.76□□□□□ -1.81
CACNA1A-203ENST00000573891 TRAV22A0A0B4J277 110 aa3.76□□□□□ -1.81
CACNA1A-203ENST00000573891 TRBV7-4A0A0J9YYF1 115 aa3.76□□□□□ -1.81
CACNA1A-203ENST00000573891 K7EMI3 77 aa3.76□□□□□ -1.81
CACNA1A-203ENST00000573891 M0QY20 66 aa3.76□□□□□ -1.81
CACNA1A-203ENST00000573891 COX6CP09669 75 aa3.76□□□□□ -1.81
CACNA1A-203ENST00000573891 KRTAP10-8P60410 259 aa3.76□□□□□ -1.81
CACNA1A-203ENST00000573891 C15orf56Q8N910 161 aa3.76□□□□□ -1.81
CACNA1A-203ENST00000573891 FAM104AQ969W3 186 aa3.76□□□□□ -1.81
CACNA1A-203ENST00000573891 NDUFA12Q9UI09 145 aa3.76□□□□□ -1.81
CACNA1A-203ENST00000573891 C11orf86A6NJI1 115 aa3.75□□□□□ -1.81
CACNA1A-203ENST00000573891 COX6A2Q02221 97 aa3.75□□□□□ -1.81
CACNA1A-203ENST00000573891 Q5VV11 94 aa3.75□□□□□ -1.81
CACNA1A-203ENST00000573891 RPP21Q9H633 154 aaKnown RBP3.75□□□□□ -1.81
CACNA1A-203ENST00000573891 CDC42SE1Q9NRR8 79 aa3.75□□□□□ -1.81
CACNA1A-203ENST00000573891 IGKV2-24A0A0C4DH68 120 aa3.74□□□□□ -1.81
CACNA1A-203ENST00000573891 LOC101927531A0A1B0GV80 90 aa3.74□□□□□ -1.81
CACNA1A-203ENST00000573891 F8VRH5 84 aa3.74□□□□□ -1.81
CACNA1A-203ENST00000573891 ADAMTSL4-AS1Q5T5F5 129 aa3.74□□□□□ -1.81
CACNA1A-203ENST00000573891 REG3GQ6UW15 175 aa3.74□□□□□ -1.81
CACNA1A-203ENST00000573891 SOSTDC1Q6X4U4 206 aa3.74□□□□□ -1.81
CACNA1A-203ENST00000573891 ZNF706Q9Y5V0 76 aaPredicted RBP3.74□□□□□ -1.81
CACNA1A-203ENST00000573891 A0A096LNI7 61 aa3.73□□□□□ -1.81
CACNA1A-203ENST00000573891 GVQW2A0A096LPI5 108 aaPredicted RBP3.73□□□□□ -1.81
CACNA1A-203ENST00000573891 GAS8-AS1O95177 125 aa3.73□□□□□ -1.81
CACNA1A-203ENST00000573891 MGPP08493 103 aa3.73□□□□□ -1.81
CACNA1A-203ENST00000573891 RPL28P46779 137 aaKnown RBP3.73□□□□□ -1.81
CACNA1A-203ENST00000573891 SPINK6Q6UWN8 80 aa3.73□□□□□ -1.81
CACNA1A-203ENST00000573891 LIMD2Q9BT23 127 aa3.73□□□□□ -1.81
CACNA1A-203ENST00000573891 XAGE1AQ9HD64 81 aa3.73□□□□□ -1.81
CACNA1A-203ENST00000573891 C22orf24Q9Y442 160 aa3.73□□□□□ -1.81
CACNA1A-203ENST00000573891 SDHAF1A6NFY7 115 aa3.72□□□□□ -1.81
CACNA1A-203ENST00000573891 IGIPA6NJ69 53 aa3.72□□□□□ -1.81
CACNA1A-203ENST00000573891 HCG22E2RYF7 251 aa3.72□□□□□ -1.81
CACNA1A-203ENST00000573891 HIGD2BQ4VC39 106 aa3.72□□□□□ -1.81
CACNA1A-203ENST00000573891 ORMDL3Q8N138 153 aa3.72□□□□□ -1.81
CACNA1A-203ENST00000573891 LPAP08519 4548 aa3.71□□□□□ -1.81
CACNA1A-203ENST00000573891 IGKV3OR2-268A0A0C4DH90 116 aa3.71□□□□□ -1.82
CACNA1A-203ENST00000573891 A0A1B0GUT8 65 aa3.71□□□□□ -1.82
CACNA1A-203ENST00000573891 SMIM1B2RUZ4 78 aa3.71□□□□□ -1.82
CACNA1A-203ENST00000573891 C9orf116Q5BN46 136 aaPredicted RBP3.71□□□□□ -1.82
CACNA1A-203ENST00000573891 AMELXQ99217 191 aa3.71□□□□□ -1.82
CACNA1A-203ENST00000573891 CDC42SE2Q9NRR3 84 aa3.71□□□□□ -1.82
CACNA1A-203ENST00000573891 MUC2Q02817 5179 aa3.7□□□□□ -1.82
CACNA1A-203ENST00000573891 A0A087WVE0 104 aa3.7□□□□□ -1.82
CACNA1A-203ENST00000573891 ZNF815PA8K554 130 aa3.7□□□□□ -1.82
CACNA1A-203ENST00000573891 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
CACNA1A-203ENST00000573891 LEPROTO15243 131 aa3.69□□□□□ -1.82
CACNA1A-203ENST00000573891 SFTA2Q6UW10 78 aa3.69□□□□□ -1.82
CACNA1A-203ENST00000573891 LYZL1Q6UWQ5 148 aa3.69□□□□□ -1.82
CACNA1A-203ENST00000573891 CNFNQ9BYD5 112 aa3.69□□□□□ -1.82
CACNA1A-203ENST00000573891 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.68□□□□□ -1.82
CACNA1A-203ENST00000573891 IGKV2-29A2NJV5 120 aaPredicted RBP3.68□□□□□ -1.82
CACNA1A-203ENST00000573891 SMIM29Q86T20 159 aa3.68□□□□□ -1.82
CACNA1A-203ENST00000573891 SND1-IT1Q9HBX3 110 aa3.68□□□□□ -1.82
CACNA1A-203ENST00000573891 LINC00846Q9NV44 126 aa3.68□□□□□ -1.82
CACNA1A-203ENST00000573891 A0A0J9YXY3 114 aa3.67□□□□□ -1.82
CACNA1A-203ENST00000573891 LINC00959A0A1B0GUT2 108 aa3.67□□□□□ -1.82
CACNA1A-203ENST00000573891 A0A1W2PNN7 141 aa3.67□□□□□ -1.82
CACNA1A-203ENST00000573891 MOBPQ13875 183 aa3.67□□□□□ -1.82
CACNA1A-203ENST00000573891 TMEM254Q8TBM7 123 aa3.67□□□□□ -1.82
CACNA1A-203ENST00000573891 RPL39LQ96EH5 51 aaKnown RBP3.67□□□□□ -1.82
CACNA1A-203ENST00000573891 PSORS1C2Q9UIG4 136 aa3.67□□□□□ -1.82
CACNA1A-203ENST00000573891 IGKV3D-7A0A0C4DH55 119 aa3.66□□□□□ -1.82
CACNA1A-203ENST00000573891 DNAL4O96015 105 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms