RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 LINC00158P58513 81 aa4.38□□□□□ -1.71
SMG1-217ENST00000569764 A0A1B0GW54 56 aa4.38□□□□□ -1.71
SMG1-217ENST00000569764 VPS13DQ5THJ4 4388 aa4.37□□□□□ -1.71
SMG1-217ENST00000569764 A0A1B0GUV1 79 aa4.37□□□□□ -1.71
SMG1-217ENST00000569764 CLPSL2Q6UWE3 100 aa4.37□□□□□ -1.71
SMG1-217ENST00000569764 C2orf66Q6UXQ4 117 aa4.37□□□□□ -1.71
SMG1-217ENST00000569764 NREPQ16612 68 aa4.37□□□□□ -1.71
SMG1-217ENST00000569764 C10orf25Q5T742 122 aa4.36□□□□□ -1.71
SMG1-217ENST00000569764 FAM104AQ969W3 186 aa4.36□□□□□ -1.71
SMG1-217ENST00000569764 TLX1NBP0CAT3 122 aa4.35□□□□□ -1.71
SMG1-217ENST00000569764 RPL39P62891 51 aaKnown RBP4.35□□□□□ -1.71
SMG1-217ENST00000569764 PRR4Q16378 134 aa4.35□□□□□ -1.71
SMG1-217ENST00000569764 WFDC10BQ8IUB3 73 aa4.35□□□□□ -1.71
SMG1-217ENST00000569764 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
SMG1-217ENST00000569764 M0QY20 66 aa4.35□□□□□ -1.71
SMG1-217ENST00000569764 SMIM2Q9BVW6 85 aa4.35□□□□□ -1.71
SMG1-217ENST00000569764 DNAH6Q9C0G6 4158 aa4.34□□□□□ -1.71
SMG1-217ENST00000569764 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
SMG1-217ENST00000569764 POLR2KP53803 58 aaKnown RBP4.34□□□□□ -1.71
SMG1-217ENST00000569764 LINC00612Q8N6U2 182 aa4.34□□□□□ -1.71
SMG1-217ENST00000569764 FBN3Q75N90 2809 aa4.34□□□□□ -1.71
SMG1-217ENST00000569764 ORMDL1Q9P0S3 153 aa4.34□□□□□ -1.72
SMG1-217ENST00000569764 SPAG11AQ6PDA7 123 aa4.33□□□□□ -1.72
SMG1-217ENST00000569764 KRTAP3-3Q9BYR6 98 aa4.32□□□□□ -1.72
SMG1-217ENST00000569764 KRTAP3-2Q9BYR7 98 aa4.32□□□□□ -1.72
SMG1-217ENST00000569764 KMT2AQ03164 3969 aa4.32□□□□□ -1.72
SMG1-217ENST00000569764 DNHD1Q96M86 4753 aa4.32□□□□□ -1.72
SMG1-217ENST00000569764 Q8N1X5 172 aa4.32□□□□□ -1.72
SMG1-217ENST00000569764 VPS13BQ7Z7G8 4022 aa4.32□□□□□ -1.72
SMG1-217ENST00000569764 TRBV6-5A0A0K0K1A5 114 aa4.32□□□□□ -1.72
SMG1-217ENST00000569764 PSORS1C2Q9UIG4 136 aa4.32□□□□□ -1.72
SMG1-217ENST00000569764 IGIPA6NJ69 53 aa4.31□□□□□ -1.72
SMG1-217ENST00000569764 BPY2O14599 106 aa4.31□□□□□ -1.72
SMG1-217ENST00000569764 ERC2-IT1O76042 136 aa4.31□□□□□ -1.72
SMG1-217ENST00000569764 MIR7-3HGQ8N6C7 128 aa4.31□□□□□ -1.72
SMG1-217ENST00000569764 DYNC2H1Q8NCM8 4307 aaKnown RBP4.3□□□□□ -1.72
SMG1-217ENST00000569764 Q8N3U1 123 aa4.3□□□□□ -1.72
SMG1-217ENST00000569764 Q5VSD8 79 aa4.3□□□□□ -1.72
SMG1-217ENST00000569764 C1orf137Q5JT78 98 aa4.3□□□□□ -1.72
SMG1-217ENST00000569764 STAB2Q8WWQ8 2551 aa4.3□□□□□ -1.72
SMG1-217ENST00000569764 JMJD7-PLA2G4BH0Y9G9 81 aa4.29□□□□□ -1.72
SMG1-217ENST00000569764 C20orf166-AS1Q96NR2 134 aa4.29□□□□□ -1.72
SMG1-217ENST00000569764 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.29□□□□□ -1.72
SMG1-217ENST00000569764 IGKV2-29A2NJV5 120 aaPredicted RBP4.29□□□□□ -1.72
SMG1-217ENST00000569764 Q6ZR54 194 aa4.29□□□□□ -1.72
SMG1-217ENST00000569764 Q8NDZ9 215 aa4.29□□□□□ -1.72
SMG1-217ENST00000569764 H3BQ85 93 aa4.29□□□□□ -1.72
SMG1-217ENST00000569764 HUWE1Q7Z6Z7 4374 aaKnown RBP4.29□□□□□ -1.72
SMG1-217ENST00000569764 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
SMG1-217ENST00000569764 SMIM29Q86T20 159 aa4.28□□□□□ -1.72
SMG1-217ENST00000569764 C9orf163Q8N9P6 203 aa4.28□□□□□ -1.72
SMG1-217ENST00000569764 KRTAP4-16G5E9R7 235 aaPredicted RBP4.28□□□□□ -1.72
SMG1-217ENST00000569764 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
SMG1-217ENST00000569764 CDC42SE2Q9NRR3 84 aa4.28□□□□□ -1.72
SMG1-217ENST00000569764 IGLV1-50A0A075B6I6 118 aa4.28□□□□□ -1.72
SMG1-217ENST00000569764 LOC101927531A0A1B0GV80 90 aa4.28□□□□□ -1.72
SMG1-217ENST00000569764 NCR3O14931 201 aa4.28□□□□□ -1.73
SMG1-217ENST00000569764 TRBV7-4A0A0J9YYF1 115 aa4.27□□□□□ -1.73
SMG1-217ENST00000569764 SPINK6Q6UWN8 80 aa4.27□□□□□ -1.73
SMG1-217ENST00000569764 NTM-AS1Q6ZSK4 140 aa4.27□□□□□ -1.73
SMG1-217ENST00000569764 LINC00959A0A1B0GUT2 108 aa4.27□□□□□ -1.73
SMG1-217ENST00000569764 COX7B2Q8TF08 81 aa4.27□□□□□ -1.73
SMG1-217ENST00000569764 A0A1B0GVX0 72 aa4.26□□□□□ -1.73
SMG1-217ENST00000569764 COX6A2Q02221 97 aa4.26□□□□□ -1.73
SMG1-217ENST00000569764 HIGD2AQ9BW72 106 aa4.26□□□□□ -1.73
SMG1-217ENST00000569764 A8MUU9 505 aa4.26□□□□□ -1.73
SMG1-217ENST00000569764 TENM2Q9NT68 2774 aa4.26□□□□□ -1.73
SMG1-217ENST00000569764 H3BPC8 53 aa4.25□□□□□ -1.73
SMG1-217ENST00000569764 NDUFB1O75438 58 aa4.25□□□□□ -1.73
SMG1-217ENST00000569764 AMELXQ99217 191 aa4.25□□□□□ -1.73
SMG1-217ENST00000569764 SMR3BP02814 79 aaPredicted RBP4.25□□□□□ -1.73
SMG1-217ENST00000569764 DNAH10Q8IVF4 4471 aa4.25□□□□□ -1.73
SMG1-217ENST00000569764 LINC00167Q96N53 147 aa4.25□□□□□ -1.73
SMG1-217ENST00000569764 H0YGX0 51 aa4.24□□□□□ -1.73
SMG1-217ENST00000569764 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
SMG1-217ENST00000569764 COX17Q14061 63 aa4.24□□□□□ -1.73
SMG1-217ENST00000569764 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
SMG1-217ENST00000569764 DNAH2Q9P225 4427 aa4.24□□□□□ -1.73
SMG1-217ENST00000569764 P0C880 135 aa4.24□□□□□ -1.73
SMG1-217ENST00000569764 CNBPP62633 177 aaKnown RBP4.23□□□□□ -1.73
SMG1-217ENST00000569764 LINC00208Q96KT6 92 aa4.23□□□□□ -1.73
SMG1-217ENST00000569764 Q8IZM0 81 aa4.23□□□□□ -1.73
SMG1-217ENST00000569764 PKD1P98161 4303 aa4.23□□□□□ -1.73
SMG1-217ENST00000569764 GVQW2A0A096LPI5 108 aaPredicted RBP4.22□□□□□ -1.73
SMG1-217ENST00000569764 TYMSOSQ8TAI1 123 aa4.22□□□□□ -1.73
SMG1-217ENST00000569764 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.73
SMG1-217ENST00000569764 ALMS1Q8TCU4 4167 aa4.21□□□□□ -1.73
SMG1-217ENST00000569764 A0A087WYN8 130 aa4.21□□□□□ -1.74
SMG1-217ENST00000569764 IGLV7-46A0A075B6I9 117 aa4.2□□□□□ -1.74
SMG1-217ENST00000569764 IGLV4-60A0A075B6I1 120 aa4.19□□□□□ -1.74
SMG1-217ENST00000569764 CDKN2A-AS1Q9UH64 79 aa4.19□□□□□ -1.74
SMG1-217ENST00000569764 MEGF8Q7Z7M0 2845 aa4.18□□□□□ -1.74
SMG1-217ENST00000569764 A0A087X002 238 aa4.18□□□□□ -1.74
SMG1-217ENST00000569764 LINC00483Q53H64 154 aa4.18□□□□□ -1.74
SMG1-217ENST00000569764 LITAFQ99732 161 aa4.18□□□□□ -1.74
SMG1-217ENST00000569764 A0A1W2PNM2 257 aa4.18□□□□□ -1.74
SMG1-217ENST00000569764 PLECQ15149 4684 aaKnown RBP4.18□□□□□ -1.74
SMG1-217ENST00000569764 PRR34Q9NV39 138 aa4.17□□□□□ -1.74
SMG1-217ENST00000569764 STARD9Q9P2P6 4700 aa4.16□□□□□ -1.74
SMG1-217ENST00000569764 PDE6GP18545 87 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms