RNA–Protein interactions for RNA: ENST00000569487.1

KLHDC4-225, Transcript of kelch domain containing 4, humanhuman

TSL 2

Gene KLHDC4, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-225ENST00000569487 FP248Q71RG6 208 aaPredicted RBP11.88□□□□□ -0.51
KLHDC4-225ENST00000569487 MRPL55Q7Z7F7 128 aaKnown RBP11.88□□□□□ -0.51
KLHDC4-225ENST00000569487 LCE6AA0A183 80 aa11.85□□□□□ -0.51
KLHDC4-225ENST00000569487 SMIM29Q86T20 159 aa11.85□□□□□ -0.51
KLHDC4-225ENST00000569487 HYDINQ4G0P3 5121 aa11.85□□□□□ -0.51
KLHDC4-225ENST00000569487 DNAH2Q9P225 4427 aa11.84□□□□□ -0.51
KLHDC4-225ENST00000569487 HIGD2AQ9BW72 106 aa11.83□□□□□ -0.52
KLHDC4-225ENST00000569487 UBE2BP63146 152 aa11.82□□□□□ -0.52
KLHDC4-225ENST00000569487 DSCR10P59022 87 aa11.82□□□□□ -0.52
KLHDC4-225ENST00000569487 REG3GQ6UW15 175 aa11.82□□□□□ -0.52
KLHDC4-225ENST00000569487 FAM30AQ9NZY2 134 aa11.8□□□□□ -0.52
KLHDC4-225ENST00000569487 LY6G6CO95867 125 aa11.78□□□□□ -0.52
KLHDC4-225ENST00000569487 NBDYA0A0U1RRE5 68 aa11.77□□□□□ -0.52
KLHDC4-225ENST00000569487 LINC00474Q9P2X8 69 aa11.77□□□□□ -0.52
KLHDC4-225ENST00000569487 LINC00476Q8WZB0 136 aa11.77□□□□□ -0.53
KLHDC4-225ENST00000569487 K7EQZ3 153 aa11.75□□□□□ -0.53
KLHDC4-225ENST00000569487 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
KLHDC4-225ENST00000569487 LINC00336Q6ZUF6 198 aa11.74□□□□□ -0.53
KLHDC4-225ENST00000569487 ZCCHC13Q8WW36 166 aaKnown RBP11.74□□□□□ -0.53
KLHDC4-225ENST00000569487 SACSQ9NZJ4 4579 aa11.74□□□□□ -0.53
KLHDC4-225ENST00000569487 IGLV8-61A0A075B6I0 122 aa11.72□□□□□ -0.53
KLHDC4-225ENST00000569487 FAM229BQ4G0N7 80 aa11.72□□□□□ -0.53
KLHDC4-225ENST00000569487 PRO0628Q9UI54 55 aa11.72□□□□□ -0.53
KLHDC4-225ENST00000569487 IGFL1Q6UW32 110 aa11.71□□□□□ -0.53
KLHDC4-225ENST00000569487 HCG22E2RYF7 251 aa11.71□□□□□ -0.54
KLHDC4-225ENST00000569487 DNAH6Q9C0G6 4158 aa11.69□□□□□ -0.54
KLHDC4-225ENST00000569487 C16orf90A8MZG2 172 aa11.69□□□□□ -0.54
KLHDC4-225ENST00000569487 PSCAO43653 123 aa11.69□□□□□ -0.54
KLHDC4-225ENST00000569487 Q6ZRN7 208 aaPredicted RBP11.67□□□□□ -0.54
KLHDC4-225ENST00000569487 A0A096LNI7 61 aa11.67□□□□□ -0.54
KLHDC4-225ENST00000569487 CNBPP62633 177 aaKnown RBP11.67□□□□□ -0.54
KLHDC4-225ENST00000569487 Q6ZR54 194 aa11.67□□□□□ -0.54
KLHDC4-225ENST00000569487 PRLHP81277 87 aa11.64□□□□□ -0.55
KLHDC4-225ENST00000569487 KMT2CQ8NEZ4 4911 aaKnown RBP11.64□□□□□ -0.55
KLHDC4-225ENST00000569487 DNAH17Q9UFH2 4485 aa11.64□□□□□ -0.55
KLHDC4-225ENST00000569487 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.64□□□□□ -0.55
KLHDC4-225ENST00000569487 A0A1W2PNN7 141 aa11.64□□□□□ -0.55
KLHDC4-225ENST00000569487 hDV103S1A0JD37 113 aa11.64□□□□□ -0.55
KLHDC4-225ENST00000569487 FRAS1Q86XX4 4008 aa11.64□□□□□ -0.55
KLHDC4-225ENST00000569487 A0A0G2JQZ4 141 aa11.63□□□□□ -0.55
KLHDC4-225ENST00000569487 IGKV2-24A0A0C4DH68 120 aa11.61□□□□□ -0.55
KLHDC4-225ENST00000569487 A0A087WSZ3 146 aa11.6□□□□□ -0.55
KLHDC4-225ENST00000569487 LRCOL1A6NCL2 159 aa11.6□□□□□ -0.55
KLHDC4-225ENST00000569487 MPLKIPQ8TAP9 179 aa11.6□□□□□ -0.55
KLHDC4-225ENST00000569487 SPRR1BP22528 89 aa11.58□□□□□ -0.56
KLHDC4-225ENST00000569487 UBE2AP49459 152 aa11.58□□□□□ -0.56
KLHDC4-225ENST00000569487 CYP4F30PQ9H0H9 118 aa11.58□□□□□ -0.56
KLHDC4-225ENST00000569487 HECTD4Q9Y4D8 3996 aa11.58□□□□□ -0.56
KLHDC4-225ENST00000569487 H0Y9J4 135 aa11.58□□□□□ -0.56
KLHDC4-225ENST00000569487 C1orf64Q8NEQ6 169 aa11.56□□□□□ -0.56
KLHDC4-225ENST00000569487 FAT2Q9NYQ8 4349 aa11.56□□□□□ -0.56
KLHDC4-225ENST00000569487 DEFB116Q30KQ4 102 aa11.56□□□□□ -0.56
KLHDC4-225ENST00000569487 NDUFB1O75438 58 aa11.55□□□□□ -0.56
KLHDC4-225ENST00000569487 KRTAP29-1A8MX34 341 aaPredicted RBP11.55□□□□□ -0.56
KLHDC4-225ENST00000569487 C14orf177Q52M58 125 aa11.55□□□□□ -0.56
KLHDC4-225ENST00000569487 WFDC13Q8IUB5 93 aa11.55□□□□□ -0.56
KLHDC4-225ENST00000569487 DNAH11Q96DT5 4516 aa11.54□□□□□ -0.56
KLHDC4-225ENST00000569487 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
KLHDC4-225ENST00000569487 MP68P56378 58 aa11.53□□□□□ -0.56
KLHDC4-225ENST00000569487 RYR2Q92736 4967 aa11.52□□□□□ -0.56
KLHDC4-225ENST00000569487 PHF5AQ7RTV0 110 aaKnown RBP11.51□□□□□ -0.57
KLHDC4-225ENST00000569487 KRTAP11-1Q8IUC1 163 aa11.51□□□□□ -0.57
KLHDC4-225ENST00000569487 A0A087WTM6 91 aa11.5□□□□□ -0.57
KLHDC4-225ENST00000569487 RTL8CO15255 209 aa11.5□□□□□ -0.57
KLHDC4-225ENST00000569487 Q1T7F1 81 aa11.5□□□□□ -0.57
KLHDC4-225ENST00000569487 BRK1Q8WUW1 75 aa11.5□□□□□ -0.57
KLHDC4-225ENST00000569487 RPL37AP61513 92 aaKnown RBP11.5□□□□□ -0.57
KLHDC4-225ENST00000569487 TRAV22A0A0B4J277 110 aa11.49□□□□□ -0.57
KLHDC4-225ENST00000569487 PRR15Q8IV56 129 aa11.49□□□□□ -0.57
KLHDC4-225ENST00000569487 H3BPC8 53 aa11.48□□□□□ -0.57
KLHDC4-225ENST00000569487 LINC00472Q9H8W2 130 aa11.48□□□□□ -0.57
KLHDC4-225ENST00000569487 A8MWP4 228 aa11.47□□□□□ -0.57
KLHDC4-225ENST00000569487 DNAH5Q8TE73 4624 aa11.47□□□□□ -0.57
KLHDC4-225ENST00000569487 CHTF8P0CG12 524 aa11.47□□□□□ -0.57
KLHDC4-225ENST00000569487 CASC2Q6XLA1 102 aa11.47□□□□□ -0.57
KLHDC4-225ENST00000569487 PKIGQ9Y2B9 76 aa11.47□□□□□ -0.57
KLHDC4-225ENST00000569487 PKD1P98161 4303 aa11.44□□□□□ -0.58
KLHDC4-225ENST00000569487 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
KLHDC4-225ENST00000569487 LINC00208Q96KT6 92 aa11.44□□□□□ -0.58
KLHDC4-225ENST00000569487 RYR3Q15413 4870 aa11.42□□□□□ -0.58
KLHDC4-225ENST00000569487 H0Y9P7 68 aa11.42□□□□□ -0.58
KLHDC4-225ENST00000569487 SPANXA2-OT1Q8N9U9 137 aa11.42□□□□□ -0.58
KLHDC4-225ENST00000569487 PRR4Q16378 134 aa11.4□□□□□ -0.58
KLHDC4-225ENST00000569487 PANO1I0J062 215 aa11.4□□□□□ -0.58
KLHDC4-225ENST00000569487 KRTAP10-2P60368 255 aa11.39□□□□□ -0.59
KLHDC4-225ENST00000569487 KRTAP13-1Q8IUC0 172 aa11.39□□□□□ -0.59
KLHDC4-225ENST00000569487 PKHD1P08F94 4074 aa11.36□□□□□ -0.59
KLHDC4-225ENST00000569487 MMP24-AS1A0A0U1RRL7 71 aa11.34□□□□□ -0.59
KLHDC4-225ENST00000569487 V9GYY9 64 aa11.34□□□□□ -0.59
KLHDC4-225ENST00000569487 DNAH8Q96JB1 4490 aa11.31□□□□□ -0.6
KLHDC4-225ENST00000569487 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.31□□□□□ -0.6
KLHDC4-225ENST00000569487 IGLV5-52A0A0A0MRZ9 124 aa11.3□□□□□ -0.6
KLHDC4-225ENST00000569487 ASB16-AS1Q495Z4 193 aa11.28□□□□□ -0.6
KLHDC4-225ENST00000569487 Q96NJ1 140 aa11.28□□□□□ -0.6
KLHDC4-225ENST00000569487 PSPHP1O15172 72 aa11.27□□□□□ -0.61
KLHDC4-225ENST00000569487 SRRM2Q9UQ35 2752 aaKnown RBP11.26□□□□□ -0.61
KLHDC4-225ENST00000569487 LINC00483Q53H64 154 aa11.26□□□□□ -0.61
KLHDC4-225ENST00000569487 C1orf195Q5TG92 126 aa11.26□□□□□ -0.61
KLHDC4-225ENST00000569487 SPACA4Q8TDM5 124 aa11.25□□□□□ -0.61
KLHDC4-225ENST00000569487 MOBPQ13875 183 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms