RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 C2orf91Q6ZV80 131 aa3.3□□□□□ -1.88
HERPUD1-217ENST00000569429 HIGD2AQ9BW72 106 aa3.3□□□□□ -1.88
HERPUD1-217ENST00000569429 SMIM13P0DJ93 91 aa3.29□□□□□ -1.88
HERPUD1-217ENST00000569429 SPRR2EP22531 72 aa3.29□□□□□ -1.88
HERPUD1-217ENST00000569429 SPRR2BP35325 72 aa3.29□□□□□ -1.88
HERPUD1-217ENST00000569429 SPRR2AP35326 72 aa3.29□□□□□ -1.88
HERPUD1-217ENST00000569429 MOBPQ13875 183 aa3.29□□□□□ -1.88
HERPUD1-217ENST00000569429 Q75L30 129 aa3.29□□□□□ -1.88
HERPUD1-217ENST00000569429 PCP2Q8IVA1 136 aa3.29□□□□□ -1.88
HERPUD1-217ENST00000569429 ERG28Q9UKR5 140 aa3.29□□□□□ -1.88
HERPUD1-217ENST00000569429 IGLV5-39A0A0G2JS06 123 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 ZNF815PA8K554 130 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 TMEM238C9JI98 176 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 J3QQQ9 107 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 M0R378 163 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 HERV-K104P63124 156 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 VAMP3Q15836 100 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 LINC00483Q53H64 154 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 SFTA2Q6UW10 78 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 SCGB1D4Q6XE38 83 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 GTF2H5Q6ZYL4 71 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 CEND1Q8N111 149 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 NKAPP1Q8N9T2 125 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 C20orf166-AS1Q96NR2 134 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 HIST1H4GQ99525 98 aa3.28□□□□□ -1.88
HERPUD1-217ENST00000569429 TAX1BP3O14907 124 aa3.27□□□□□ -1.89
HERPUD1-217ENST00000569429 COX17Q14061 63 aa3.27□□□□□ -1.89
HERPUD1-217ENST00000569429 LCE3BQ5TA77 95 aa3.27□□□□□ -1.89
HERPUD1-217ENST00000569429 SPANXB1Q9NS25 103 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-217ENST00000569429 A6NN06 94 aa3.26□□□□□ -1.89
HERPUD1-217ENST00000569429 NPC2P61916 151 aa3.26□□□□□ -1.89
HERPUD1-217ENST00000569429 RPL24P83731 157 aaKnown RBP3.26□□□□□ -1.89
HERPUD1-217ENST00000569429 Q6ZVH6 145 aa3.26□□□□□ -1.89
HERPUD1-217ENST00000569429 COPS9Q8WXC6 57 aa3.26□□□□□ -1.89
HERPUD1-217ENST00000569429 DSTQ03001 7570 aaKnown RBP3.25□□□□□ -1.89
HERPUD1-217ENST00000569429 IGLV9-49A0A0B4J1Y8 123 aa3.25□□□□□ -1.89
HERPUD1-217ENST00000569429 FABP2P12104 132 aa3.25□□□□□ -1.89
HERPUD1-217ENST00000569429 TSPEAR-AS2P59090 65 aa3.25□□□□□ -1.89
HERPUD1-217ENST00000569429 LYRM7Q5U5X0 104 aa3.25□□□□□ -1.89
HERPUD1-217ENST00000569429 MIR7-3HGQ8N6C7 128 aa3.25□□□□□ -1.89
HERPUD1-217ENST00000569429 SND1-IT1Q9HBX3 110 aa3.25□□□□□ -1.89
HERPUD1-217ENST00000569429 LIMD2Q9BT23 127 aa3.24□□□□□ -1.89
HERPUD1-217ENST00000569429 TTTY13Q9BZ97 58 aa3.24□□□□□ -1.89
HERPUD1-217ENST00000569429 NHP2Q9NX24 153 aaKnown RBP3.24□□□□□ -1.89
HERPUD1-217ENST00000569429 TRBV20-1A0A075B6N2 111 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 A0A0J9YXY3 114 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 A0A1B0GWB2 263 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 A0A1W2PPM0 123 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 H3BUT2 72 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 K7EP34 96 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 TIMM17BO60830 172 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 IFITM1P13164 125 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 FXYD2P54710 66 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 C6orf99Q4VX62 202 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 RAB37Q96AX2 223 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 SPCS1Q9Y6A9 102 aa3.23□□□□□ -1.89
HERPUD1-217ENST00000569429 NCR3O14931 201 aa3.22□□□□□ -1.89
HERPUD1-217ENST00000569429 S100A7L2Q5SY68 101 aa3.22□□□□□ -1.89
HERPUD1-217ENST00000569429 ADAMTSL4-AS1Q5T5F5 129 aa3.22□□□□□ -1.89
HERPUD1-217ENST00000569429 OR13C6PQ8NH95 151 aa3.22□□□□□ -1.89
HERPUD1-217ENST00000569429 SMCR5Q8TEV8 140 aa3.22□□□□□ -1.89
HERPUD1-217ENST00000569429 SPANXDQ9BXN6 97 aa3.22□□□□□ -1.89
HERPUD1-217ENST00000569429 SPANXCQ9NY87 97 aa3.22□□□□□ -1.89
HERPUD1-217ENST00000569429 A0A0B4J2C4 111 aa3.21□□□□□ -1.9
HERPUD1-217ENST00000569429 F8W1H4 67 aa3.21□□□□□ -1.9
HERPUD1-217ENST00000569429 ATP11AUNQ6ZP68 121 aa3.21□□□□□ -1.9
HERPUD1-217ENST00000569429 PRO1854Q9UHT4 67 aa3.21□□□□□ -1.9
HERPUD1-217ENST00000569429 MUSTN1Q8IVN3 82 aa3.2□□□□□ -1.9
HERPUD1-217ENST00000569429 LINC00308Q8TCZ7 52 aa3.2□□□□□ -1.9
HERPUD1-217ENST00000569429 J3QR89 54 aa3.19□□□□□ -1.9
HERPUD1-217ENST00000569429 K7ERJ3 54 aa3.19□□□□□ -1.9
HERPUD1-217ENST00000569429 K7ERU9 68 aa3.19□□□□□ -1.9
HERPUD1-217ENST00000569429 COX6CP09669 75 aa3.19□□□□□ -1.9
HERPUD1-217ENST00000569429 SCGB1C2P0DMR2 95 aa3.19□□□□□ -1.9
HERPUD1-217ENST00000569429 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
HERPUD1-217ENST00000569429 Q8N9P0 234 aaPredicted RBP3.19□□□□□ -1.9
HERPUD1-217ENST00000569429 MPLKIPQ8TAP9 179 aa3.19□□□□□ -1.9
HERPUD1-217ENST00000569429 SPRR2FQ96RM1 72 aa3.19□□□□□ -1.9
HERPUD1-217ENST00000569429 LOC107984156A0A0G2JMH3 177 aa3.18□□□□□ -1.9
HERPUD1-217ENST00000569429 TRBV10-3A0A0K0K1G6 114 aa3.18□□□□□ -1.9
HERPUD1-217ENST00000569429 SPRR2DP22532 72 aa3.18□□□□□ -1.9
HERPUD1-217ENST00000569429 PSMB2P49721 201 aa3.18□□□□□ -1.9
HERPUD1-217ENST00000569429 Q1RN00 199 aa3.18□□□□□ -1.9
HERPUD1-217ENST00000569429 SOSTDC1Q6X4U4 206 aa3.18□□□□□ -1.9
HERPUD1-217ENST00000569429 ARL17AQ8IVW1 177 aa3.18□□□□□ -1.9
HERPUD1-217ENST00000569429 Q8NDZ9 215 aa3.18□□□□□ -1.9
HERPUD1-217ENST00000569429 LITAFQ99732 161 aa3.18□□□□□ -1.9
HERPUD1-217ENST00000569429 ETDCA0A1B0GVM5 59 aa3.17□□□□□ -1.9
HERPUD1-217ENST00000569429 NDUFC2O95298 119 aa3.17□□□□□ -1.9
HERPUD1-217ENST00000569429 C9orf153Q5TBE3 101 aa3.17□□□□□ -1.9
HERPUD1-217ENST00000569429 NAA38Q9BRA0 125 aaKnown RBP3.17□□□□□ -1.9
HERPUD1-217ENST00000569429 CBY1Q9Y3M2 126 aa3.17□□□□□ -1.9
HERPUD1-217ENST00000569429 TRAV23DV6A0A075B6W5 121 aa3.16□□□□□ -1.9
HERPUD1-217ENST00000569429 TRAV13-2A0A0B4J235 113 aa3.16□□□□□ -1.9
HERPUD1-217ENST00000569429 TRBV10-2A0A0K0K1G8 114 aa3.16□□□□□ -1.9
HERPUD1-217ENST00000569429 FAM236DA0A1B0GTK5 79 aa3.16□□□□□ -1.9
HERPUD1-217ENST00000569429 FAM236CP0DP71 79 aa3.16□□□□□ -1.9
HERPUD1-217ENST00000569429 ATXN8Q156A1 80 aa3.16□□□□□ -1.9
HERPUD1-217ENST00000569429 OCIAD2Q56VL3 154 aa3.16□□□□□ -1.9
HERPUD1-217ENST00000569429 H3BMG7 143 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms