RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 ALMS1Q8TCU4 4167 aa9.75□□□□□ -0.85
SNX20-204ENST00000568993 IGLV5-48A0A075B6I7 105 aa9.75□□□□□ -0.85
SNX20-204ENST00000568993 SMIM26A0A096LP01 95 aa9.75□□□□□ -0.85
SNX20-204ENST00000568993 PANO1I0J062 215 aa9.75□□□□□ -0.85
SNX20-204ENST00000568993 SPACA4Q8TDM5 124 aa9.75□□□□□ -0.85
SNX20-204ENST00000568993 RTL8CO15255 209 aa9.75□□□□□ -0.85
SNX20-204ENST00000568993 UBE2BP63146 152 aa9.73□□□□□ -0.85
SNX20-204ENST00000568993 ERC2-IT1O76042 136 aa9.73□□□□□ -0.85
SNX20-204ENST00000568993 KRTAP11-1Q8IUC1 163 aa9.73□□□□□ -0.85
SNX20-204ENST00000568993 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.73□□□□□ -0.85
SNX20-204ENST00000568993 H0Y9J4 135 aa9.72□□□□□ -0.85
SNX20-204ENST00000568993 FP248Q71RG6 208 aaPredicted RBP9.72□□□□□ -0.85
SNX20-204ENST00000568993 DEFB105AQ8NG35 78 aa9.72□□□□□ -0.85
SNX20-204ENST00000568993 ST20-AS1Q8NBB2 130 aa9.71□□□□□ -0.86
SNX20-204ENST00000568993 IGLV5-52A0A0A0MRZ9 124 aa9.68□□□□□ -0.86
SNX20-204ENST00000568993 PRLHP81277 87 aa9.68□□□□□ -0.86
SNX20-204ENST00000568993 Q6JHZ5 121 aa9.68□□□□□ -0.86
SNX20-204ENST00000568993 TNP2Q05952 138 aa9.67□□□□□ -0.86
SNX20-204ENST00000568993 FUSP35637 526 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNX20-204ENST00000568993 UBL5Q9BZL1 73 aa9.65□□□□□ -0.86
SNX20-204ENST00000568993 PLAC8Q9NZF1 115 aa9.65□□□□□ -0.86
SNX20-204ENST00000568993 BCE1O60756 84 aa9.65□□□□□ -0.87
SNX20-204ENST00000568993 SMIM29Q86T20 159 aa9.63□□□□□ -0.87
SNX20-204ENST00000568993 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
SNX20-204ENST00000568993 KRTAP13-1Q8IUC0 172 aa9.63□□□□□ -0.87
SNX20-204ENST00000568993 HIGD2AQ9BW72 106 aa9.63□□□□□ -0.87
SNX20-204ENST00000568993 ATP5EP2Q5VTU8 51 aa9.63□□□□□ -0.87
SNX20-204ENST00000568993 PRR15Q8IV56 129 aa9.62□□□□□ -0.87
SNX20-204ENST00000568993 UBE2AP49459 152 aa9.61□□□□□ -0.87
SNX20-204ENST00000568993 A0A1B0GW54 56 aa9.6□□□□□ -0.87
SNX20-204ENST00000568993 SPRR1BP22528 89 aa9.6□□□□□ -0.87
SNX20-204ENST00000568993 IGKV3D-7A0A0C4DH55 119 aa9.59□□□□□ -0.87
SNX20-204ENST00000568993 Q6ZVQ6 151 aa9.59□□□□□ -0.87
SNX20-204ENST00000568993 DNAH11Q96DT5 4516 aa9.59□□□□□ -0.87
SNX20-204ENST00000568993 C1orf137Q5JT78 98 aa9.58□□□□□ -0.88
SNX20-204ENST00000568993 IGLV8-61A0A075B6I0 122 aa9.57□□□□□ -0.88
SNX20-204ENST00000568993 KRTAP10-2P60368 255 aa9.56□□□□□ -0.88
SNX20-204ENST00000568993 HYDINQ4G0P3 5121 aa9.56□□□□□ -0.88
SNX20-204ENST00000568993 A0A1W2PNM2 257 aa9.55□□□□□ -0.88
SNX20-204ENST00000568993 F8WEM9 126 aa9.55□□□□□ -0.88
SNX20-204ENST00000568993 H7BZZ5 65 aa9.55□□□□□ -0.88
SNX20-204ENST00000568993 DNAH5Q8TE73 4624 aa9.54□□□□□ -0.88
SNX20-204ENST00000568993 Q8NBF4 154 aa9.54□□□□□ -0.88
SNX20-204ENST00000568993 PSORS1C2Q9UIG4 136 aa9.54□□□□□ -0.88
SNX20-204ENST00000568993 DNAH8Q96JB1 4490 aa9.54□□□□□ -0.88
SNX20-204ENST00000568993 SPRR4Q96PI1 79 aa9.53□□□□□ -0.88
SNX20-204ENST00000568993 FAT2Q9NYQ8 4349 aa9.53□□□□□ -0.88
SNX20-204ENST00000568993 CXCL6P80162 114 aa9.53□□□□□ -0.88
SNX20-204ENST00000568993 SRRM2Q9UQ35 2752 aaKnown RBP9.52□□□□□ -0.89
SNX20-204ENST00000568993 PKD1P98161 4303 aa9.51□□□□□ -0.89
SNX20-204ENST00000568993 HAMPP81172 84 aa9.5□□□□□ -0.89
SNX20-204ENST00000568993 IGFL1Q6UW32 110 aa9.49□□□□□ -0.89
SNX20-204ENST00000568993 Q6ZSA8 131 aa9.49□□□□□ -0.89
SNX20-204ENST00000568993 FAM30AQ9NZY2 134 aa9.49□□□□□ -0.89
SNX20-204ENST00000568993 NREPQ16612 68 aa9.48□□□□□ -0.89
SNX20-204ENST00000568993 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
SNX20-204ENST00000568993 ZNF861PO60384 105 aa9.48□□□□□ -0.89
SNX20-204ENST00000568993 A0A087WVE0 104 aa9.47□□□□□ -0.89
SNX20-204ENST00000568993 ATP5EP56381 51 aaPredicted RBP9.47□□□□□ -0.89
SNX20-204ENST00000568993 LINC00483Q53H64 154 aa9.46□□□□□ -0.89
SNX20-204ENST00000568993 CIRBP-AS1Q8TBR5 109 aa9.46□□□□□ -0.89
SNX20-204ENST00000568993 SACSQ9NZJ4 4579 aa9.46□□□□□ -0.89
SNX20-204ENST00000568993 KRTAP10-1P60331 282 aa9.46□□□□□ -0.9
SNX20-204ENST00000568993 LCE6AA0A183 80 aa9.45□□□□□ -0.9
SNX20-204ENST00000568993 ZNF706Q9Y5V0 76 aaPredicted RBP9.45□□□□□ -0.9
SNX20-204ENST00000568993 KLKP1Q107X0 134 aa9.44□□□□□ -0.9
SNX20-204ENST00000568993 IGLV7-43P04211 117 aa9.43□□□□□ -0.9
SNX20-204ENST00000568993 A0A0G2JQZ4 141 aa9.42□□□□□ -0.9
SNX20-204ENST00000568993 SCXQ7RTU7 201 aa9.42□□□□□ -0.9
SNX20-204ENST00000568993 RBM12B-AS1Q9P1G2 102 aa9.42□□□□□ -0.9
SNX20-204ENST00000568993 BPY2O14599 106 aa9.4□□□□□ -0.9
SNX20-204ENST00000568993 RPL37AP61513 92 aaKnown RBP9.39□□□□□ -0.91
SNX20-204ENST00000568993 NDUFC1O43677 76 aa9.37□□□□□ -0.91
SNX20-204ENST00000568993 TRAV7A0A075B6U4 112 aa9.36□□□□□ -0.91
SNX20-204ENST00000568993 H3BS24 57 aa9.36□□□□□ -0.91
SNX20-204ENST00000568993 MPLKIPQ8TAP9 179 aa9.36□□□□□ -0.91
SNX20-204ENST00000568993 A0A087WSZ3 146 aa9.34□□□□□ -0.91
SNX20-204ENST00000568993 IGKV4-1P06312 121 aa9.34□□□□□ -0.91
SNX20-204ENST00000568993 FAM229BQ4G0N7 80 aa9.33□□□□□ -0.92
SNX20-204ENST00000568993 IGLV9-49A0A0B4J1Y8 123 aa9.32□□□□□ -0.92
SNX20-204ENST00000568993 KTN1-AS1Q86SY8 53 aa9.32□□□□□ -0.92
SNX20-204ENST00000568993 LRP1BQ9NZR2 4599 aa9.31□□□□□ -0.92
SNX20-204ENST00000568993 Q8N9L7 120 aa9.31□□□□□ -0.92
SNX20-204ENST00000568993 DSCR10P59022 87 aa9.31□□□□□ -0.92
SNX20-204ENST00000568993 A0A1B0GVY2 172 aa9.29□□□□□ -0.92
SNX20-204ENST00000568993 ANAPC11Q9NYG5 84 aa9.29□□□□□ -0.92
SNX20-204ENST00000568993 MOBPQ13875 183 aa9.27□□□□□ -0.93
SNX20-204ENST00000568993 LINC00472Q9H8W2 130 aa9.26□□□□□ -0.93
SNX20-204ENST00000568993 RYR2Q92736 4967 aa9.25□□□□□ -0.93
SNX20-204ENST00000568993 SNURFQ9Y675 71 aa9.25□□□□□ -0.93
SNX20-204ENST00000568993 PKHD1P08F94 4074 aa9.24□□□□□ -0.93
SNX20-204ENST00000568993 K7EQZ3 153 aa9.23□□□□□ -0.93
SNX20-204ENST00000568993 C8orf87E5RJ46 101 aa9.22□□□□□ -0.93
SNX20-204ENST00000568993 Q1T7F1 81 aa9.22□□□□□ -0.93
SNX20-204ENST00000568993 DEFB116Q30KQ4 102 aa9.21□□□□□ -0.93
SNX20-204ENST00000568993 SSBP3-AS1Q7Z2R9 100 aa9.21□□□□□ -0.93
SNX20-204ENST00000568993 VPS13BQ7Z7G8 4022 aa9.2□□□□□ -0.94
SNX20-204ENST00000568993 DYNC1H1Q14204 4646 aaKnown RBP9.2□□□□□ -0.94
SNX20-204ENST00000568993 NDUFS5O43920 106 aa9.19□□□□□ -0.94
SNX20-204ENST00000568993 Q96NJ1 140 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms