RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 A0A087WVE0 104 aa1.73□□□□□ -2.13
HERPUD1-212ENST00000567944 IGKV1-6A0A0C4DH72 117 aa1.73□□□□□ -2.13
HERPUD1-212ENST00000567944 M0R1W7 72 aa1.73□□□□□ -2.13
HERPUD1-212ENST00000567944 DEFB114Q30KQ6 69 aa1.73□□□□□ -2.13
HERPUD1-212ENST00000567944 LUZP6Q538Z0 58 aa1.73□□□□□ -2.13
HERPUD1-212ENST00000567944 SMIM2Q9BVW6 85 aa1.73□□□□□ -2.13
HERPUD1-212ENST00000567944 HIGD2AQ9BW72 106 aa1.73□□□□□ -2.13
HERPUD1-212ENST00000567944 TTTY10Q9BZA0 68 aa1.73□□□□□ -2.13
HERPUD1-212ENST00000567944 NDUFA4L2Q9NRX3 87 aa1.73□□□□□ -2.13
HERPUD1-212ENST00000567944 COL7A1Q02388 2944 aa1.73□□□□□ -2.13
HERPUD1-212ENST00000567944 DYNC2H1Q8NCM8 4307 aaKnown RBP1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 MUC4Q99102 2169 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 A0A087WSZ3 146 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 A0A096LNT2 108 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 TRAV10A0A0B4J240 114 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 A0A1W2PNN7 141 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 IGIPA6NJ69 53 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 IGHV1-46P01743 117 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 ROMO1P60602 79 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 SPAG11BQ08648 103 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 FAM229BQ4G0N7 80 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 C1orf134Q5TEV5 83 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 SPAG11AQ6PDA7 123 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 WFDC9Q8NEX5 89 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 MUC7Q8TAX7 377 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 DMAC1Q96GE9 116 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 LINC00208Q96KT6 92 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 CNFNQ9BYD5 112 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 FAM215AQ9Y5M1 114 aa1.72□□□□□ -2.13
HERPUD1-212ENST00000567944 IGKV1D-42A0A075B6H8 117 aa1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 LOC110117498A0A087WWA1 95 aa1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 IGKV3D-11A0A0A0MRZ8 115 aa1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 MRPL33O75394 65 aaKnown RBP1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 IGLV1-51P01701 117 aa1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 CTSGP08311 255 aa1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 MGPP08493 103 aa1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 PRB4P10163 310 aaPredicted RBP1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 COX7B2Q8TF08 81 aa1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 C4orf3Q8WVX3 66 aa1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 DNAH9Q9NYC9 4486 aa1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 SACSQ9NZJ4 4579 aa1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 BIRC6Q9NR09 4857 aa1.71□□□□□ -2.14
HERPUD1-212ENST00000567944 DNAH1Q9P2D7 4330 aa1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 DNAH3Q8TD57 4116 aa1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 IGHV3-15A0A0B4J1V0 119 aa1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 DEFB108AA8MXU0 73 aa1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 LECT2O14960 151 aa1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 HAMPP81172 84 aa1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 MIR22HGQ0VDD5 57 aa1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 Q6ZQT0 140 aa1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 ZCCHC13Q8WW36 166 aaKnown RBP1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 WFDC10AQ9H1F0 79 aa1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 LINC01558Q9Y6Z2 57 aa1.7□□□□□ -2.14
HERPUD1-212ENST00000567944 TENM2Q9NT68 2774 aa1.69□□□□□ -2.14
HERPUD1-212ENST00000567944 SORL1Q92673 2214 aa1.69□□□□□ -2.14
HERPUD1-212ENST00000567944 H0Y9P7 68 aa1.69□□□□□ -2.14
HERPUD1-212ENST00000567944 UQCR11O14957 56 aa1.69□□□□□ -2.14
HERPUD1-212ENST00000567944 COX17Q14061 63 aa1.69□□□□□ -2.14
HERPUD1-212ENST00000567944 NNATQ16517 81 aa1.69□□□□□ -2.14
HERPUD1-212ENST00000567944 DEFB110Q30KQ9 67 aa1.69□□□□□ -2.14
HERPUD1-212ENST00000567944 FAM27BQ5VT28 67 aa1.69□□□□□ -2.14
HERPUD1-212ENST00000567944 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.69□□□□□ -2.14
HERPUD1-212ENST00000567944 GAFA1Q96PS6 74 aa1.69□□□□□ -2.14
HERPUD1-212ENST00000567944 KIAA2026Q5HYC2 2103 aa1.69□□□□□ -2.14
HERPUD1-212ENST00000567944 IGHV3-64A0A075B6Q5 118 aa1.68□□□□□ -2.14
HERPUD1-212ENST00000567944 IGHV1-18A0A0C4DH31 117 aa1.68□□□□□ -2.14
HERPUD1-212ENST00000567944 IGKV2-24A0A0C4DH68 120 aa1.68□□□□□ -2.14
HERPUD1-212ENST00000567944 LCE6AA0A183 80 aa1.68□□□□□ -2.14
HERPUD1-212ENST00000567944 ETDCA0A1B0GVM5 59 aa1.68□□□□□ -2.14
HERPUD1-212ENST00000567944 A8MWP4 228 aa1.68□□□□□ -2.14
HERPUD1-212ENST00000567944 STATHP02808 62 aa1.68□□□□□ -2.14
HERPUD1-212ENST00000567944 C1orf137Q5JT78 98 aa1.68□□□□□ -2.14
HERPUD1-212ENST00000567944 Q8NDZ9 215 aa1.68□□□□□ -2.14
HERPUD1-212ENST00000567944 KLK9Q9UKQ9 250 aa1.68□□□□□ -2.14
HERPUD1-212ENST00000567944 EPPK1P58107 5090 aaKnown RBP1.68□□□□□ -2.14
HERPUD1-212ENST00000567944 H0YGG7 62 aa1.67□□□□□ -2.14
HERPUD1-212ENST00000567944 H3BSH0 61 aa1.67□□□□□ -2.14
HERPUD1-212ENST00000567944 NDUFA4O00483 81 aa1.67□□□□□ -2.14
HERPUD1-212ENST00000567944 CCL22O00626 93 aa1.67□□□□□ -2.14
HERPUD1-212ENST00000567944 NDUFA1O15239 70 aa1.67□□□□□ -2.14
HERPUD1-212ENST00000567944 CNBPP62633 177 aaKnown RBP1.67□□□□□ -2.14
HERPUD1-212ENST00000567944 LINC00322Q6ZN03 302 aaPredicted RBP1.67□□□□□ -2.14
HERPUD1-212ENST00000567944 ADM2Q7Z4H4 148 aa1.67□□□□□ -2.14
HERPUD1-212ENST00000567944 CCL19Q99731 98 aa1.67□□□□□ -2.14
HERPUD1-212ENST00000567944 TTTY12Q9BZ98 90 aa1.67□□□□□ -2.14
HERPUD1-212ENST00000567944 RYR1P21817 5038 aa1.66□□□□□ -2.14
HERPUD1-212ENST00000567944 RYR2Q92736 4967 aa1.66□□□□□ -2.14
HERPUD1-212ENST00000567944 TRGV2A0A075B6R0 118 aa1.66□□□□□ -2.14
HERPUD1-212ENST00000567944 TRGV4A0A0C4DH28 118 aa1.66□□□□□ -2.14
HERPUD1-212ENST00000567944 IGLV3-1P01715 115 aa1.66□□□□□ -2.14
HERPUD1-212ENST00000567944 IGHV3-53P01767 116 aa1.66□□□□□ -2.14
HERPUD1-212ENST00000567944 CLPSP04118 112 aa1.66□□□□□ -2.14
HERPUD1-212ENST00000567944 CGB3P0DN86 165 aa1.66□□□□□ -2.14
HERPUD1-212ENST00000567944 CGB7P0DN87 165 aa1.66□□□□□ -2.14
HERPUD1-212ENST00000567944 DEFB112Q30KQ8 113 aa1.66□□□□□ -2.14
HERPUD1-212ENST00000567944 LINC00308Q8TCZ7 52 aa1.66□□□□□ -2.14
HERPUD1-212ENST00000567944 TANC2Q9HCD6 1990 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms