RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 TENM2Q9NT68 2774 aa10.57□□□□□ -0.72
CMTM3-213ENST00000566756 A0A096LNI7 61 aa10.56□□□□□ -0.72
CMTM3-213ENST00000566756 SMIM26A0A096LP01 95 aa10.56□□□□□ -0.72
CMTM3-213ENST00000566756 NBDYA0A0U1RRE5 68 aa10.56□□□□□ -0.72
CMTM3-213ENST00000566756 PSCAO43653 123 aa10.56□□□□□ -0.72
CMTM3-213ENST00000566756 LYSTQ99698 3801 aa10.55□□□□□ -0.72
CMTM3-213ENST00000566756 C4orf26Q17RF5 130 aa10.54□□□□□ -0.72
CMTM3-213ENST00000566756 FBN3Q75N90 2809 aa10.54□□□□□ -0.72
CMTM3-213ENST00000566756 STARD9Q9P2P6 4700 aa10.53□□□□□ -0.72
CMTM3-213ENST00000566756 H0Y9J4 135 aa10.52□□□□□ -0.72
CMTM3-213ENST00000566756 IGFL1Q6UW32 110 aa10.52□□□□□ -0.72
CMTM3-213ENST00000566756 A0A1W2PNN7 141 aa10.52□□□□□ -0.73
CMTM3-213ENST00000566756 K7EQZ3 153 aa10.5□□□□□ -0.73
CMTM3-213ENST00000566756 VPS13DQ5THJ4 4388 aa10.49□□□□□ -0.73
CMTM3-213ENST00000566756 SPRR1BP22528 89 aa10.49□□□□□ -0.73
CMTM3-213ENST00000566756 IGKV2-24A0A0C4DH68 120 aa10.48□□□□□ -0.73
CMTM3-213ENST00000566756 HIGD2AQ9BW72 106 aa10.48□□□□□ -0.73
CMTM3-213ENST00000566756 FAM30AQ9NZY2 134 aa10.48□□□□□ -0.73
CMTM3-213ENST00000566756 HCG22E2RYF7 251 aa10.48□□□□□ -0.73
CMTM3-213ENST00000566756 PRLHP81277 87 aa10.48□□□□□ -0.73
CMTM3-213ENST00000566756 HRCT1Q6UXD1 115 aa10.48□□□□□ -0.73
CMTM3-213ENST00000566756 Q6ZRN7 208 aaPredicted RBP10.48□□□□□ -0.73
CMTM3-213ENST00000566756 WWC2-AS2Q96NR7 200 aa10.46□□□□□ -0.73
CMTM3-213ENST00000566756 LINC00474Q9P2X8 69 aa10.46□□□□□ -0.74
CMTM3-213ENST00000566756 UBE2AP49459 152 aa10.45□□□□□ -0.74
CMTM3-213ENST00000566756 FP248Q71RG6 208 aaPredicted RBP10.45□□□□□ -0.74
CMTM3-213ENST00000566756 ZCCHC13Q8WW36 166 aaKnown RBP10.45□□□□□ -0.74
CMTM3-213ENST00000566756 LRCOL1A6NCL2 159 aa10.45□□□□□ -0.74
CMTM3-213ENST00000566756 Q6ZR54 194 aa10.43□□□□□ -0.74
CMTM3-213ENST00000566756 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.42□□□□□ -0.74
CMTM3-213ENST00000566756 C9orf163Q8N9P6 203 aa10.42□□□□□ -0.74
CMTM3-213ENST00000566756 DNAH10Q8IVF4 4471 aa10.41□□□□□ -0.74
CMTM3-213ENST00000566756 A0A087WSZ3 146 aa10.41□□□□□ -0.74
CMTM3-213ENST00000566756 PHF5AQ7RTV0 110 aaKnown RBP10.39□□□□□ -0.75
CMTM3-213ENST00000566756 TGP01266 2768 aa10.38□□□□□ -0.75
CMTM3-213ENST00000566756 A0A0G2JQZ4 141 aa10.37□□□□□ -0.75
CMTM3-213ENST00000566756 KRTAP11-1Q8IUC1 163 aa10.37□□□□□ -0.75
CMTM3-213ENST00000566756 CHTF8P0CG12 524 aa10.36□□□□□ -0.75
CMTM3-213ENST00000566756 NDUFB1O75438 58 aa10.35□□□□□ -0.75
CMTM3-213ENST00000566756 KRTAP29-1A8MX34 341 aaPredicted RBP10.35□□□□□ -0.75
CMTM3-213ENST00000566756 MP68P56378 58 aa10.33□□□□□ -0.76
CMTM3-213ENST00000566756 A0A087WTM6 91 aa10.32□□□□□ -0.76
CMTM3-213ENST00000566756 LY6G6CO95867 125 aa10.32□□□□□ -0.76
CMTM3-213ENST00000566756 KRTAP13-1Q8IUC0 172 aa10.32□□□□□ -0.76
CMTM3-213ENST00000566756 LINC00472Q9H8W2 130 aa10.32□□□□□ -0.76
CMTM3-213ENST00000566756 PRR15Q8IV56 129 aa10.32□□□□□ -0.76
CMTM3-213ENST00000566756 CYP4F30PQ9H0H9 118 aa10.32□□□□□ -0.76
CMTM3-213ENST00000566756 hDV103S1A0JD37 113 aa10.31□□□□□ -0.76
CMTM3-213ENST00000566756 A8MWP4 228 aa10.31□□□□□ -0.76
CMTM3-213ENST00000566756 H3BPC8 53 aa10.31□□□□□ -0.76
CMTM3-213ENST00000566756 DNAH6Q9C0G6 4158 aa10.31□□□□□ -0.76
CMTM3-213ENST00000566756 DEFB116Q30KQ4 102 aa10.3□□□□□ -0.76
CMTM3-213ENST00000566756 FAM229BQ4G0N7 80 aa10.3□□□□□ -0.76
CMTM3-213ENST00000566756 C1orf134Q5TEV5 83 aa10.3□□□□□ -0.76
CMTM3-213ENST00000566756 WFDC13Q8IUB5 93 aa10.29□□□□□ -0.76
CMTM3-213ENST00000566756 KMT2AQ03164 3969 aa10.29□□□□□ -0.76
CMTM3-213ENST00000566756 RPL37AP61513 92 aaKnown RBP10.27□□□□□ -0.77
CMTM3-213ENST00000566756 CASC2Q6XLA1 102 aa10.27□□□□□ -0.77
CMTM3-213ENST00000566756 LINC00336Q6ZUF6 198 aa10.27□□□□□ -0.77
CMTM3-213ENST00000566756 PRO0628Q9UI54 55 aa10.27□□□□□ -0.77
CMTM3-213ENST00000566756 ALMS1Q8TCU4 4167 aa10.25□□□□□ -0.77
CMTM3-213ENST00000566756 TRAV22A0A0B4J277 110 aa10.25□□□□□ -0.77
CMTM3-213ENST00000566756 C1orf64Q8NEQ6 169 aa10.24□□□□□ -0.77
CMTM3-213ENST00000566756 SPACA4Q8TDM5 124 aa10.24□□□□□ -0.77
CMTM3-213ENST00000566756 ZNF706Q9Y5V0 76 aaPredicted RBP10.22□□□□□ -0.77
CMTM3-213ENST00000566756 PANO1I0J062 215 aa10.21□□□□□ -0.77
CMTM3-213ENST00000566756 SPANXA2-OT1Q8N9U9 137 aa10.21□□□□□ -0.77
CMTM3-213ENST00000566756 DNAH2Q9P225 4427 aa10.21□□□□□ -0.78
CMTM3-213ENST00000566756 LINC00483Q53H64 154 aa10.21□□□□□ -0.78
CMTM3-213ENST00000566756 H0Y9P7 68 aa10.19□□□□□ -0.78
CMTM3-213ENST00000566756 RTL8CO15255 209 aa10.19□□□□□ -0.78
CMTM3-213ENST00000566756 MPLKIPQ8TAP9 179 aa10.19□□□□□ -0.78
CMTM3-213ENST00000566756 Q1T7F1 81 aa10.19□□□□□ -0.78
CMTM3-213ENST00000566756 LINC00208Q96KT6 92 aa10.19□□□□□ -0.78
CMTM3-213ENST00000566756 MMP24-AS1A0A0U1RRL7 71 aa10.17□□□□□ -0.78
CMTM3-213ENST00000566756 DNAH17Q9UFH2 4485 aa10.16□□□□□ -0.78
CMTM3-213ENST00000566756 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.16□□□□□ -0.78
CMTM3-213ENST00000566756 ASB16-AS1Q495Z4 193 aa10.14□□□□□ -0.79
CMTM3-213ENST00000566756 IGLV5-52A0A0A0MRZ9 124 aa10.14□□□□□ -0.79
CMTM3-213ENST00000566756 Q96NJ1 140 aa10.14□□□□□ -0.79
CMTM3-213ENST00000566756 HECTD4Q9Y4D8 3996 aa10.13□□□□□ -0.79
CMTM3-213ENST00000566756 MOBPQ13875 183 aa10.13□□□□□ -0.79
CMTM3-213ENST00000566756 TP53AIP1Q9HCN2 124 aa10.13□□□□□ -0.79
CMTM3-213ENST00000566756 V9GYY9 64 aa10.11□□□□□ -0.79
CMTM3-213ENST00000566756 IGLV9-49A0A0B4J1Y8 123 aa10.09□□□□□ -0.79
CMTM3-213ENST00000566756 PLAC8Q9NZF1 115 aa10.09□□□□□ -0.79
CMTM3-213ENST00000566756 FRAS1Q86XX4 4008 aa10.08□□□□□ -0.8
CMTM3-213ENST00000566756 BRK1Q8WUW1 75 aa10.07□□□□□ -0.8
CMTM3-213ENST00000566756 PRR4Q16378 134 aa10.06□□□□□ -0.8
CMTM3-213ENST00000566756 ZNF861PO60384 105 aa10.05□□□□□ -0.8
CMTM3-213ENST00000566756 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
CMTM3-213ENST00000566756 C8orf17Q9NRJ1 99 aa10.05□□□□□ -0.8
CMTM3-213ENST00000566756 PSORS1C2Q9UIG4 136 aa10.05□□□□□ -0.8
CMTM3-213ENST00000566756 A0A1B0GVX0 72 aa10.03□□□□□ -0.8
CMTM3-213ENST00000566756 KRTAP10-2P60368 255 aa10.03□□□□□ -0.8
CMTM3-213ENST00000566756 HYDINQ4G0P3 5121 aa10.01□□□□□ -0.81
CMTM3-213ENST00000566756 IGLV7-46A0A075B6I9 117 aa10.01□□□□□ -0.81
CMTM3-213ENST00000566756 SRRM2Q9UQ35 2752 aaKnown RBP10□□□□□ -0.81
CMTM3-213ENST00000566756 C1orf195Q5TG92 126 aa9.99□□□□□ -0.81
CMTM3-213ENST00000566756 DNAH11Q96DT5 4516 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 241.6 ms