RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 S100PP25815 95 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 GNG4P50150 75 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 NPC2P61916 151 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 RPL39P62891 51 aaKnown RBP0.68□□□□□ -2.3
CHD9-215ENST00000565442 RHOHQ15669 191 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 ZNF56Q15929 161 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 LINC01545Q5VT33 79 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 LINC00299Q6ZSB3 139 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 Q6ZUT4 128 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 NDUFA11Q86Y39 141 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 FAM223AQ8IWN6 122 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 C14orf144Q96I85 54 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 PSMG3Q9BT73 122 aaPredicted RBP0.68□□□□□ -2.3
CHD9-215ENST00000565442 NPVFQ9HCQ7 196 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 NOP10Q9NPE3 64 aaKnown RBP0.68□□□□□ -2.3
CHD9-215ENST00000565442 TMEM242Q9NWH2 141 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 V9GYV3 84 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 F8P00451 2351 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 TNCP24821 2201 aa0.68□□□□□ -2.3
CHD9-215ENST00000565442 NAV2Q8IVL1 2488 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 STAB1Q9NY15 2570 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 VPS13DQ5THJ4 4388 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 SPTA1P02549 2419 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 CREBBPQ92793 2442 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 FRAS1Q86XX4 4008 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 TRBV7-1A0A0A6YYK4 115 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 LOC107984156A0A0G2JMH3 177 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 C20orf202A1L168 122 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 TMEM218A2RU14 115 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 C7orf77A4D0Y5 90 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 HIGD1CA8MV81 97 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 OOSP1A8MZH6 123 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 D6R8Y8 96 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 PDE6GP18545 87 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 IFI27P40305 119 aaPredicted RBP0.67□□□□□ -2.3
CHD9-215ENST00000565442 UBE2G1P62253 170 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 TDRG1Q3Y452 100 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 MEIG1Q5JSS6 88 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 CASC2Q6XLA1 102 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 ARL17AQ8IVW1 177 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 TCTEX1D1Q8N7M0 179 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 C12orf57Q99622 126 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 PRO1933Q9H354 126 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 C10orf95Q9H7T3 257 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 FAT2Q9NYQ8 4349 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 DNAH11Q96DT5 4516 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 DNAH17Q9UFH2 4485 aa0.67□□□□□ -2.3
CHD9-215ENST00000565442 TPRP12270 2363 aaKnown RBP0.67□□□□□ -2.3
CHD9-215ENST00000565442 PLECQ15149 4684 aaKnown RBP0.67□□□□□ -2.3
CHD9-215ENST00000565442 RYR3Q15413 4870 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 DNAH8Q96JB1 4490 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 FLNBO75369 2602 aaKnown RBP0.66□□□□□ -2.3
CHD9-215ENST00000565442 A0A0D9SG42 100 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 H3BUA1 57 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 LY6G6CO95867 125 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 SPINK8P0C7L1 97 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 RPL37AP61513 92 aaKnown RBP0.66□□□□□ -2.3
CHD9-215ENST00000565442 COX6A2Q02221 97 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 C9orf116Q5BN46 136 aaPredicted RBP0.66□□□□□ -2.3
CHD9-215ENST00000565442 CFAP126Q5VTH2 177 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 CSAG1Q6PB30 78 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 LYPD5Q6UWN5 251 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 Q6ZQY7 126 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 BAGE2Q86Y30 109 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 C18orf32Q8TCD1 76 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 MANBALQ9NQG1 85 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 SETD2Q9BYW2 2564 aaPredicted RBP0.66□□□□□ -2.3
CHD9-215ENST00000565442 MTORP42345 2549 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 TLN2Q9Y4G6 2542 aa0.66□□□□□ -2.3
CHD9-215ENST00000565442 EPPK1P58107 5090 aaKnown RBP0.66□□□□□ -2.3
CHD9-215ENST00000565442 SACSQ9NZJ4 4579 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 ATRQ13535 2644 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 TRAV30A0A087WSZ9 112 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 SMIM27A0A1W2PRY6 76 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 A8MTW9 85 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 SMR3BP02814 79 aaPredicted RBP0.65□□□□□ -2.31
CHD9-215ENST00000565442 ASIPP42127 132 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 KRTDAPP60985 99 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 PEA15Q15121 130 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 KLK9Q2XQG4 91 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 SPANXN1Q5VSR9 72 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 Q6AWC8 147 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 SFTA2Q6UW10 78 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 TSKUQ8WUA8 353 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 PPDPFLQ8WWR9 84 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 USMG5Q96IX5 58 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 SEC11CQ9BY50 192 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 TMEM167BQ9NRX6 74 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 NDUFA12Q9UI09 145 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 APLNQ9ULZ1 77 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 C2CD3Q4AC94 2353 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 HECTD4Q9Y4D8 3996 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 NBEAL2Q6ZNJ1 2754 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 COL6A5A8TX70 2615 aa0.65□□□□□ -2.31
CHD9-215ENST00000565442 WNK1Q9H4A3 2382 aa0.64□□□□□ -2.31
CHD9-215ENST00000565442 RYR2Q92736 4967 aa0.64□□□□□ -2.31
CHD9-215ENST00000565442 TENM2Q9NT68 2774 aa0.64□□□□□ -2.31
CHD9-215ENST00000565442 DNAH5Q8TE73 4624 aa0.64□□□□□ -2.31
CHD9-215ENST00000565442 JMJD1CQ15652 2540 aa0.64□□□□□ -2.31
CHD9-215ENST00000565442 DEFB131BA0A096LNP1 70 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms