RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 C3orf84H3BNL1 204 aa10.43□□□□□ -0.74
CCNF-204ENST00000564333 PKIGQ9Y2B9 76 aa10.43□□□□□ -0.74
CCNF-204ENST00000564333 C9orf163Q8N9P6 203 aa10.43□□□□□ -0.74
CCNF-204ENST00000564333 C1orf137Q5JT78 98 aa10.42□□□□□ -0.74
CCNF-204ENST00000564333 PRLHP81277 87 aa10.41□□□□□ -0.74
CCNF-204ENST00000564333 Q8NBF4 154 aa10.41□□□□□ -0.74
CCNF-204ENST00000564333 C4orf26Q17RF5 130 aa10.41□□□□□ -0.74
CCNF-204ENST00000564333 SPRR4Q96PI1 79 aa10.41□□□□□ -0.74
CCNF-204ENST00000564333 TGP01266 2768 aa10.4□□□□□ -0.74
CCNF-204ENST00000564333 PHF5AQ7RTV0 110 aaKnown RBP10.4□□□□□ -0.74
CCNF-204ENST00000564333 A0A0U1RQV1 116 aa10.39□□□□□ -0.75
CCNF-204ENST00000564333 Q8N9L7 120 aa10.39□□□□□ -0.75
CCNF-204ENST00000564333 STARD9Q9P2P6 4700 aa10.39□□□□□ -0.75
CCNF-204ENST00000564333 A0A1W2PNM2 257 aa10.38□□□□□ -0.75
CCNF-204ENST00000564333 VPS13DQ5THJ4 4388 aa10.36□□□□□ -0.75
CCNF-204ENST00000564333 HRCT1Q6UXD1 115 aa10.36□□□□□ -0.75
CCNF-204ENST00000564333 KRTAP11-1Q8IUC1 163 aa10.36□□□□□ -0.75
CCNF-204ENST00000564333 SMIM29Q86T20 159 aa10.35□□□□□ -0.75
CCNF-204ENST00000564333 HIGD2AQ9BW72 106 aa10.35□□□□□ -0.75
CCNF-204ENST00000564333 LINC00474Q9P2X8 69 aa10.35□□□□□ -0.75
CCNF-204ENST00000564333 LCE6AA0A183 80 aa10.32□□□□□ -0.76
CCNF-204ENST00000564333 LINC00476Q8WZB0 136 aa10.32□□□□□ -0.76
CCNF-204ENST00000564333 PANO1I0J062 215 aa10.31□□□□□ -0.76
CCNF-204ENST00000564333 A0A087WTM6 91 aa10.3□□□□□ -0.76
CCNF-204ENST00000564333 H0Y9J4 135 aa10.3□□□□□ -0.76
CCNF-204ENST00000564333 TENM2Q9NT68 2774 aa10.29□□□□□ -0.76
CCNF-204ENST00000564333 UBE2AP49459 152 aa10.28□□□□□ -0.76
CCNF-204ENST00000564333 SPACA4Q8TDM5 124 aa10.28□□□□□ -0.76
CCNF-204ENST00000564333 IGFL1Q6UW32 110 aa10.27□□□□□ -0.77
CCNF-204ENST00000564333 Q6ZR54 194 aa10.27□□□□□ -0.77
CCNF-204ENST00000564333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.27□□□□□ -0.77
CCNF-204ENST00000564333 IGLV8-61A0A075B6I0 122 aa10.26□□□□□ -0.77
CCNF-204ENST00000564333 DSCR10P59022 87 aa10.26□□□□□ -0.77
CCNF-204ENST00000564333 FP248Q71RG6 208 aaPredicted RBP10.26□□□□□ -0.77
CCNF-204ENST00000564333 FAM30AQ9NZY2 134 aa10.25□□□□□ -0.77
CCNF-204ENST00000564333 SPRR1BP22528 89 aa10.23□□□□□ -0.77
CCNF-204ENST00000564333 A0A0G2JQZ4 141 aa10.23□□□□□ -0.77
CCNF-204ENST00000564333 HCG22E2RYF7 251 aa10.23□□□□□ -0.77
CCNF-204ENST00000564333 RTL8CO15255 209 aa10.23□□□□□ -0.77
CCNF-204ENST00000564333 K7EQZ3 153 aa10.21□□□□□ -0.77
CCNF-204ENST00000564333 SEC61GP60059 68 aa10.21□□□□□ -0.78
CCNF-204ENST00000564333 KRTAP13-1Q8IUC0 172 aa10.21□□□□□ -0.78
CCNF-204ENST00000564333 PRO0628Q9UI54 55 aa10.21□□□□□ -0.78
CCNF-204ENST00000564333 ZCCHC13Q8WW36 166 aaKnown RBP10.19□□□□□ -0.78
CCNF-204ENST00000564333 NDUFB1O75438 58 aa10.18□□□□□ -0.78
CCNF-204ENST00000564333 C1orf134Q5TEV5 83 aa10.17□□□□□ -0.78
CCNF-204ENST00000564333 DNAH17Q9UFH2 4485 aa10.17□□□□□ -0.78
CCNF-204ENST00000564333 A0A087WSZ3 146 aa10.15□□□□□ -0.78
CCNF-204ENST00000564333 DNAH2Q9P225 4427 aa10.15□□□□□ -0.78
CCNF-204ENST00000564333 LINC00336Q6ZUF6 198 aa10.14□□□□□ -0.79
CCNF-204ENST00000564333 IGLV5-52A0A0A0MRZ9 124 aa10.13□□□□□ -0.79
CCNF-204ENST00000564333 LY6G6CO95867 125 aa10.13□□□□□ -0.79
CCNF-204ENST00000564333 KMT2AQ03164 3969 aa10.12□□□□□ -0.79
CCNF-204ENST00000564333 MP68P56378 58 aa10.12□□□□□ -0.79
CCNF-204ENST00000564333 hDV103S1A0JD37 113 aa10.11□□□□□ -0.79
CCNF-204ENST00000564333 PLAC8Q9NZF1 115 aa10.11□□□□□ -0.79
CCNF-204ENST00000564333 CYP4F30PQ9H0H9 118 aa10.11□□□□□ -0.79
CCNF-204ENST00000564333 H3BPC8 53 aa10.1□□□□□ -0.79
CCNF-204ENST00000564333 HECTD4Q9Y4D8 3996 aa10.09□□□□□ -0.79
CCNF-204ENST00000564333 FAM229BQ4G0N7 80 aa10.09□□□□□ -0.79
CCNF-204ENST00000564333 PSORS1C2Q9UIG4 136 aa10.09□□□□□ -0.79
CCNF-204ENST00000564333 DNAH6Q9C0G6 4158 aa10.07□□□□□ -0.8
CCNF-204ENST00000564333 DEFB116Q30KQ4 102 aa10.07□□□□□ -0.8
CCNF-204ENST00000564333 LINC00483Q53H64 154 aa10.05□□□□□ -0.8
CCNF-204ENST00000564333 MPLKIPQ8TAP9 179 aa10.05□□□□□ -0.8
CCNF-204ENST00000564333 ZNF706Q9Y5V0 76 aaPredicted RBP10.05□□□□□ -0.8
CCNF-204ENST00000564333 KRTAP29-1A8MX34 341 aaPredicted RBP10.04□□□□□ -0.8
CCNF-204ENST00000564333 PRR15Q8IV56 129 aa10.04□□□□□ -0.8
CCNF-204ENST00000564333 C1orf64Q8NEQ6 169 aa10.04□□□□□ -0.8
CCNF-204ENST00000564333 IGLV9-49A0A0B4J1Y8 123 aa10.03□□□□□ -0.8
CCNF-204ENST00000564333 A8MWP4 228 aa10.03□□□□□ -0.8
CCNF-204ENST00000564333 Q1T7F1 81 aa10.03□□□□□ -0.8
CCNF-204ENST00000564333 WFDC13Q8IUB5 93 aa10.03□□□□□ -0.8
CCNF-204ENST00000564333 WWC2-AS2Q96NR7 200 aa10.03□□□□□ -0.8
CCNF-204ENST00000564333 DNAH8Q96JB1 4490 aa10.03□□□□□ -0.8
CCNF-204ENST00000564333 CASC2Q6XLA1 102 aa10.02□□□□□ -0.81
CCNF-204ENST00000564333 TRAV22A0A0B4J277 110 aa10.01□□□□□ -0.81
CCNF-204ENST00000564333 SPANXA2-OT1Q8N9U9 137 aa10.01□□□□□ -0.81
CCNF-204ENST00000564333 SRRM2Q9UQ35 2752 aaKnown RBP10.01□□□□□ -0.81
CCNF-204ENST00000564333 ZNF861PO60384 105 aa10□□□□□ -0.81
CCNF-204ENST00000564333 LINC00472Q9H8W2 130 aa10□□□□□ -0.81
CCNF-204ENST00000564333 ALMS1Q8TCU4 4167 aa10□□□□□ -0.81
CCNF-204ENST00000564333 RPL37AP61513 92 aaKnown RBP9.99□□□□□ -0.81
CCNF-204ENST00000564333 BRK1Q8WUW1 75 aa9.99□□□□□ -0.81
CCNF-204ENST00000564333 V9GYY9 64 aa9.99□□□□□ -0.81
CCNF-204ENST00000564333 H0Y9P7 68 aa9.96□□□□□ -0.81
CCNF-204ENST00000564333 LINC00208Q96KT6 92 aa9.96□□□□□ -0.81
CCNF-204ENST00000564333 KRTAP10-2P60368 255 aa9.95□□□□□ -0.82
CCNF-204ENST00000564333 MOBPQ13875 183 aa9.94□□□□□ -0.82
CCNF-204ENST00000564333 IGLV7-43P04211 117 aa9.93□□□□□ -0.82
CCNF-204ENST00000564333 FRAS1Q86XX4 4008 aa9.92□□□□□ -0.82
CCNF-204ENST00000564333 ANAPC11Q9NYG5 84 aa9.92□□□□□ -0.82
CCNF-204ENST00000564333 DNAH5Q8TE73 4624 aa9.91□□□□□ -0.82
CCNF-204ENST00000564333 DNAH11Q96DT5 4516 aa9.9□□□□□ -0.82
CCNF-204ENST00000564333 CIRBP-AS1Q8TBR5 109 aa9.9□□□□□ -0.83
CCNF-204ENST00000564333 Q96NJ1 140 aa9.89□□□□□ -0.83
CCNF-204ENST00000564333 TP53AIP1Q9HCN2 124 aa9.89□□□□□ -0.83
CCNF-204ENST00000564333 MMP24-AS1A0A0U1RRL7 71 aa9.87□□□□□ -0.83
CCNF-204ENST00000564333 PRR4Q16378 134 aa9.86□□□□□ -0.83
CCNF-204ENST00000564333 C1orf195Q5TG92 126 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms