RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 KCNQ1DNQ9H478 68 aa4.28□□□□□ -1.73
TSPAN3-209ENST00000560715 ITPR3Q14573 2671 aa4.27□□□□□ -1.73
TSPAN3-209ENST00000560715 C15orf56Q8N910 161 aa4.27□□□□□ -1.73
TSPAN3-209ENST00000560715 C2CD3Q4AC94 2353 aa4.26□□□□□ -1.73
TSPAN3-209ENST00000560715 HIVEP1P15822 2718 aa4.26□□□□□ -1.73
TSPAN3-209ENST00000560715 IGLV1-50A0A075B6I6 118 aa4.25□□□□□ -1.73
TSPAN3-209ENST00000560715 IGKV2-30P06310 120 aa4.25□□□□□ -1.73
TSPAN3-209ENST00000560715 DSCR10P59022 87 aa4.25□□□□□ -1.73
TSPAN3-209ENST00000560715 WFDC10AQ9H1F0 79 aa4.25□□□□□ -1.73
TSPAN3-209ENST00000560715 NOP10Q9NPE3 64 aaKnown RBP4.24□□□□□ -1.73
TSPAN3-209ENST00000560715 IGLV5-48A0A075B6I7 105 aa4.24□□□□□ -1.73
TSPAN3-209ENST00000560715 A8MUU9 505 aa4.24□□□□□ -1.73
TSPAN3-209ENST00000560715 K7EQZ3 153 aa4.24□□□□□ -1.73
TSPAN3-209ENST00000560715 KRTAP10-2P60368 255 aa4.24□□□□□ -1.73
TSPAN3-209ENST00000560715 KPRPQ5T749 579 aaPredicted RBP4.24□□□□□ -1.73
TSPAN3-209ENST00000560715 PLAC8Q9NZF1 115 aa4.24□□□□□ -1.73
TSPAN3-209ENST00000560715 LINC01558Q9Y6Z2 57 aa4.24□□□□□ -1.73
TSPAN3-209ENST00000560715 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
TSPAN3-209ENST00000560715 H3BPC8 53 aa4.23□□□□□ -1.73
TSPAN3-209ENST00000560715 FLNAP21333 2647 aaKnown RBP4.23□□□□□ -1.73
TSPAN3-209ENST00000560715 A0A0J9YWU9 116 aa4.23□□□□□ -1.73
TSPAN3-209ENST00000560715 CLPSL2Q6UWE3 100 aa4.23□□□□□ -1.73
TSPAN3-209ENST00000560715 CASC2Q6XLA1 102 aa4.23□□□□□ -1.73
TSPAN3-209ENST00000560715 COA5Q86WW8 74 aa4.23□□□□□ -1.73
TSPAN3-209ENST00000560715 CCDC168Q8NDH2 2452 aa4.22□□□□□ -1.73
TSPAN3-209ENST00000560715 NF1P21359 2839 aa4.22□□□□□ -1.73
TSPAN3-209ENST00000560715 A0A1W2PNM2 257 aa4.22□□□□□ -1.73
TSPAN3-209ENST00000560715 IGLV1-51P01701 117 aa4.22□□□□□ -1.73
TSPAN3-209ENST00000560715 UNQ6190/PRO20217Q6UXQ8 127 aa4.22□□□□□ -1.73
TSPAN3-209ENST00000560715 C14orf177Q52M58 125 aa4.21□□□□□ -1.73
TSPAN3-209ENST00000560715 SPAG11BQ08648 103 aa4.21□□□□□ -1.74
TSPAN3-209ENST00000560715 SMR3AQ99954 134 aa4.21□□□□□ -1.74
TSPAN3-209ENST00000560715 WNK1Q9H4A3 2382 aa4.2□□□□□ -1.74
TSPAN3-209ENST00000560715 FAM168BA1KXE4 195 aa4.2□□□□□ -1.74
TSPAN3-209ENST00000560715 SPINK7P58062 85 aa4.2□□□□□ -1.74
TSPAN3-209ENST00000560715 C9orf163Q8N9P6 203 aa4.2□□□□□ -1.74
TSPAN3-209ENST00000560715 RETNLBQ9BQ08 111 aa4.2□□□□□ -1.74
TSPAN3-209ENST00000560715 SETD2Q9BYW2 2564 aaPredicted RBP4.2□□□□□ -1.74
TSPAN3-209ENST00000560715 CNBPP62633 177 aaKnown RBP4.2□□□□□ -1.74
TSPAN3-209ENST00000560715 TLN2Q9Y4G6 2542 aa4.2□□□□□ -1.74
TSPAN3-209ENST00000560715 ASB16-AS1Q495Z4 193 aa4.2□□□□□ -1.74
TSPAN3-209ENST00000560715 SPRR4Q96PI1 79 aa4.2□□□□□ -1.74
TSPAN3-209ENST00000560715 SONP18583 2426 aaKnown RBP4.19□□□□□ -1.74
TSPAN3-209ENST00000560715 GVQW2A0A096LPI5 108 aaPredicted RBP4.19□□□□□ -1.74
TSPAN3-209ENST00000560715 DNHD1Q96M86 4753 aa4.19□□□□□ -1.74
TSPAN3-209ENST00000560715 IGKV2D-24A0A075B6R9 120 aa4.19□□□□□ -1.74
TSPAN3-209ENST00000560715 H0Y9P7 68 aa4.19□□□□□ -1.74
TSPAN3-209ENST00000560715 KRTAP10-3P60369 221 aa4.18□□□□□ -1.74
TSPAN3-209ENST00000560715 XAGE1AQ9HD64 81 aa4.18□□□□□ -1.74
TSPAN3-209ENST00000560715 IGLV10-54A0A075B6I4 117 aa4.18□□□□□ -1.74
TSPAN3-209ENST00000560715 KRTAP24-1Q3LI83 254 aa4.18□□□□□ -1.74
TSPAN3-209ENST00000560715 SPAG11AQ6PDA7 123 aa4.18□□□□□ -1.74
TSPAN3-209ENST00000560715 MTORP42345 2549 aa4.18□□□□□ -1.74
TSPAN3-209ENST00000560715 C1orf137Q5JT78 98 aa4.17□□□□□ -1.74
TSPAN3-209ENST00000560715 Q8NAQ8 132 aa4.17□□□□□ -1.74
TSPAN3-209ENST00000560715 DEFB116Q30KQ4 102 aa4.17□□□□□ -1.74
TSPAN3-209ENST00000560715 DEFB105AQ8NG35 78 aa4.17□□□□□ -1.74
TSPAN3-209ENST00000560715 ACANP16112 2415 aa4.16□□□□□ -1.74
TSPAN3-209ENST00000560715 ZNF861PO60384 105 aa4.16□□□□□ -1.74
TSPAN3-209ENST00000560715 WFDC13Q8IUB5 93 aa4.16□□□□□ -1.74
TSPAN3-209ENST00000560715 KRTAP29-1A8MX34 341 aaPredicted RBP4.16□□□□□ -1.74
TSPAN3-209ENST00000560715 C6orf48Q9UBA6 75 aa4.16□□□□□ -1.74
TSPAN3-209ENST00000560715 HIVEP2P31629 2446 aa4.15□□□□□ -1.75
TSPAN3-209ENST00000560715 ANGP03950 147 aaKnown RBP4.15□□□□□ -1.75
TSPAN3-209ENST00000560715 WFDC10BQ8IUB3 73 aa4.15□□□□□ -1.75
TSPAN3-209ENST00000560715 NIPBLQ6KC79 2804 aaeCLIP4.14□□□□□ -1.75
TSPAN3-209ENST00000560715 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
TSPAN3-209ENST00000560715 RTL8CO15255 209 aa4.13□□□□□ -1.75
TSPAN3-209ENST00000560715 NSD1Q96L73 2696 aaPredicted RBP4.11□□□□□ -1.75
TSPAN3-209ENST00000560715 FN1P02751 2386 aaKnown RBP4.11□□□□□ -1.75
TSPAN3-209ENST00000560715 C1orf134Q5TEV5 83 aa4.11□□□□□ -1.75
TSPAN3-209ENST00000560715 A0A096LPF7 62 aa4.11□□□□□ -1.75
TSPAN3-209ENST00000560715 FBN3Q75N90 2809 aa4.1□□□□□ -1.75
TSPAN3-209ENST00000560715 DEFB130BP0DP73 79 aa4.09□□□□□ -1.75
TSPAN3-209ENST00000560715 DEFB130AP0DP74 79 aa4.09□□□□□ -1.75
TSPAN3-209ENST00000560715 PRO0255Q9UI72 69 aa4.09□□□□□ -1.75
TSPAN3-209ENST00000560715 Q6ZRX8 168 aa4.08□□□□□ -1.76
TSPAN3-209ENST00000560715 NOTCH3Q9UM47 2321 aa4.08□□□□□ -1.76
TSPAN3-209ENST00000560715 HRES1P13985 223 aa4.08□□□□□ -1.76
TSPAN3-209ENST00000560715 PCOTHQ58A44 107 aa4.07□□□□□ -1.76
TSPAN3-209ENST00000560715 PRR34Q9NV39 138 aa4.07□□□□□ -1.76
TSPAN3-209ENST00000560715 FBN1P35555 2871 aaKnown RBP4.07□□□□□ -1.76
TSPAN3-209ENST00000560715 RPL37AP61513 92 aaKnown RBP4.07□□□□□ -1.76
TSPAN3-209ENST00000560715 CSAG1Q6PB30 78 aa4.07□□□□□ -1.76
TSPAN3-209ENST00000560715 DEFB135Q30KP9 77 aa4.06□□□□□ -1.76
TSPAN3-209ENST00000560715 PANO1I0J062 215 aa4.06□□□□□ -1.76
TSPAN3-209ENST00000560715 Q6ZR54 194 aa4.06□□□□□ -1.76
TSPAN3-209ENST00000560715 JMJD1CQ15652 2540 aa4.06□□□□□ -1.76
TSPAN3-209ENST00000560715 DNAH10OSP0CZ25 163 aa4.05□□□□□ -1.76
TSPAN3-209ENST00000560715 A0A087WSZ3 146 aa4.04□□□□□ -1.76
TSPAN3-209ENST00000560715 SPATA8Q6RVD6 105 aa4.04□□□□□ -1.76
TSPAN3-209ENST00000560715 IGFL1Q6UW32 110 aa4.04□□□□□ -1.76
TSPAN3-209ENST00000560715 ROMO1P60602 79 aa4.04□□□□□ -1.76
TSPAN3-209ENST00000560715 CMYA5Q8N3K9 4069 aa4.04□□□□□ -1.76
TSPAN3-209ENST00000560715 SPART-AS1P0CW21 52 aa4.04□□□□□ -1.76
TSPAN3-209ENST00000560715 SPRR1AP35321 89 aa4.04□□□□□ -1.76
TSPAN3-209ENST00000560715 KRTAP7-1Q8IUC3 87 aa4.04□□□□□ -1.76
TSPAN3-209ENST00000560715 ANK2Q01484 3957 aa4.03□□□□□ -1.76
TSPAN3-209ENST00000560715 TRRAPQ9Y4A5 3859 aa4.03□□□□□ -1.76
TSPAN3-209ENST00000560715 DEFB131BA0A096LNP1 70 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms