RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 IGLV6-57P01721 117 aa5.72□□□□□ -1.49
TPM1-225ENST00000560679 SIGMAR1Q99720 223 aa5.72□□□□□ -1.49
TPM1-225ENST00000560679 NDUFC2-KCTD14E9PQ53 114 aa5.71□□□□□ -1.5
TPM1-225ENST00000560679 LINC01547P58512 204 aaPredicted RBP5.71□□□□□ -1.5
TPM1-225ENST00000560679 LINC00167Q96N53 147 aa5.71□□□□□ -1.5
TPM1-225ENST00000560679 XAGE1AQ9HD64 81 aa5.71□□□□□ -1.5
TPM1-225ENST00000560679 VPREB1P12018 145 aa5.7□□□□□ -1.5
TPM1-225ENST00000560679 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
TPM1-225ENST00000560679 C22orf24Q9Y442 160 aa5.7□□□□□ -1.5
TPM1-225ENST00000560679 FAM240AA0A1B0GVK7 77 aa5.69□□□□□ -1.5
TPM1-225ENST00000560679 PCP4P48539 62 aa5.69□□□□□ -1.5
TPM1-225ENST00000560679 C6orf99Q4VX62 202 aa5.69□□□□□ -1.5
TPM1-225ENST00000560679 TRBV10-3A0A0K0K1G6 114 aa5.68□□□□□ -1.5
TPM1-225ENST00000560679 M0R378 163 aa5.68□□□□□ -1.5
TPM1-225ENST00000560679 BCE1O60756 84 aa5.68□□□□□ -1.5
TPM1-225ENST00000560679 SNCGO76070 127 aa5.68□□□□□ -1.5
TPM1-225ENST00000560679 SCGB1A1P11684 91 aa5.68□□□□□ -1.5
TPM1-225ENST00000560679 ORMDL1Q9P0S3 153 aa5.68□□□□□ -1.5
TPM1-225ENST00000560679 TRAV23DV6A0A075B6W5 121 aa5.67□□□□□ -1.5
TPM1-225ENST00000560679 ASB16-AS1Q495Z4 193 aa5.67□□□□□ -1.5
TPM1-225ENST00000560679 LINC00575Q6W349 94 aa5.67□□□□□ -1.5
TPM1-225ENST00000560679 TRBV7-6A0A0J9YX20 115 aa5.66□□□□□ -1.5
TPM1-225ENST00000560679 MT-ATP8P03928 68 aa5.66□□□□□ -1.5
TPM1-225ENST00000560679 ACYP1P07311 99 aa5.66□□□□□ -1.5
TPM1-225ENST00000560679 KRTAP13-1Q8IUC0 172 aa5.66□□□□□ -1.5
TPM1-225ENST00000560679 FAM229BQ4G0N7 80 aa5.65□□□□□ -1.5
TPM1-225ENST00000560679 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
TPM1-225ENST00000560679 OBSCN-AS1Q96MR7 158 aa5.65□□□□□ -1.5
TPM1-225ENST00000560679 hADV29S1A0JD25 119 aa5.64□□□□□ -1.51
TPM1-225ENST00000560679 ZNF73O43830 326 aaPredicted RBP5.64□□□□□ -1.51
TPM1-225ENST00000560679 COX7BP24311 80 aa5.64□□□□□ -1.51
TPM1-225ENST00000560679 IGLV5-37A0A075B6J1 123 aa5.63□□□□□ -1.51
TPM1-225ENST00000560679 H3BQ85 93 aa5.63□□□□□ -1.51
TPM1-225ENST00000560679 ELOF1P60002 83 aaKnown RBP5.63□□□□□ -1.51
TPM1-225ENST00000560679 C21orf62-AS1Q17RA5 79 aa5.63□□□□□ -1.51
TPM1-225ENST00000560679 KRTAP13-3Q3SY46 172 aa5.63□□□□□ -1.51
TPM1-225ENST00000560679 MRPL55Q7Z7F7 128 aaKnown RBP5.63□□□□□ -1.51
TPM1-225ENST00000560679 NKAPP1Q8N9T2 125 aa5.63□□□□□ -1.51
TPM1-225ENST00000560679 TMEM256-PLSCR3K7ERE1 68 aa5.62□□□□□ -1.51
TPM1-225ENST00000560679 KRTAP19-2Q3LHN2 52 aa5.62□□□□□ -1.51
TPM1-225ENST00000560679 RPL37AP8A6NKH3 93 aa5.61□□□□□ -1.51
TPM1-225ENST00000560679 JMJD7-PLA2G4BH0Y9G9 81 aa5.61□□□□□ -1.51
TPM1-225ENST00000560679 GAGE2AQ6NT46 116 aa5.61□□□□□ -1.51
TPM1-225ENST00000560679 C14orf132Q9NPU4 83 aa5.61□□□□□ -1.51
TPM1-225ENST00000560679 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.6□□□□□ -1.51
TPM1-225ENST00000560679 C3orf22Q8N5N4 141 aa5.6□□□□□ -1.51
TPM1-225ENST00000560679 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
TPM1-225ENST00000560679 PRYO14603 147 aa5.59□□□□□ -1.51
TPM1-225ENST00000560679 GHRHP01286 108 aa5.59□□□□□ -1.51
TPM1-225ENST00000560679 MT1HP80294 61 aa5.59□□□□□ -1.51
TPM1-225ENST00000560679 Q6Q795 121 aa5.59□□□□□ -1.51
TPM1-225ENST00000560679 Q6ZQY7 126 aa5.59□□□□□ -1.51
TPM1-225ENST00000560679 FP248Q71RG6 208 aaPredicted RBP5.59□□□□□ -1.51
TPM1-225ENST00000560679 CCKP06307 115 aa5.57□□□□□ -1.52
TPM1-225ENST00000560679 UBE2AP49459 152 aa5.57□□□□□ -1.52
TPM1-225ENST00000560679 LINC00643Q86TS7 51 aa5.57□□□□□ -1.52
TPM1-225ENST00000560679 SMCR5Q8TEV8 140 aa5.57□□□□□ -1.52
TPM1-225ENST00000560679 TRBV7-7A0A0K0K1E9 115 aa5.56□□□□□ -1.52
TPM1-225ENST00000560679 A0A1B0GV72 72 aa5.56□□□□□ -1.52
TPM1-225ENST00000560679 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
TPM1-225ENST00000560679 LORP23490 312 aaPredicted RBP5.56□□□□□ -1.52
TPM1-225ENST00000560679 SEC61BP60468 96 aaKnown RBP5.56□□□□□ -1.52
TPM1-225ENST00000560679 PRLHP81277 87 aa5.56□□□□□ -1.52
TPM1-225ENST00000560679 LAMTOR3Q9UHA4 124 aa5.56□□□□□ -1.52
TPM1-225ENST00000560679 LOC110117498A0A087WWA1 95 aa5.55□□□□□ -1.52
TPM1-225ENST00000560679 FLGP20930 4061 aaPredicted RBP5.55□□□□□ -1.52
TPM1-225ENST00000560679 ETDCA0A1B0GVM5 59 aa5.54□□□□□ -1.52
TPM1-225ENST00000560679 SPRR1AP35321 89 aa5.54□□□□□ -1.52
TPM1-225ENST00000560679 RBM3P98179 157 aaKnown RBP5.54□□□□□ -1.52
TPM1-225ENST00000560679 DHRS4-AS1Q9P1J3 65 aa5.54□□□□□ -1.52
TPM1-225ENST00000560679 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.53□□□□□ -1.52
TPM1-225ENST00000560679 B5MCH6 92 aa5.53□□□□□ -1.52
TPM1-225ENST00000560679 KRTAP4-16G5E9R7 235 aaPredicted RBP5.53□□□□□ -1.52
TPM1-225ENST00000560679 PDE6GP18545 87 aa5.53□□□□□ -1.52
TPM1-225ENST00000560679 KRTAP10-6P60371 365 aaPredicted RBP5.53□□□□□ -1.52
TPM1-225ENST00000560679 Q6JHZ5 121 aa5.53□□□□□ -1.52
TPM1-225ENST00000560679 Q6ZQT0 140 aa5.53□□□□□ -1.52
TPM1-225ENST00000560679 Q6ZRX8 168 aa5.53□□□□□ -1.52
TPM1-225ENST00000560679 IMUPQ9GZP8 106 aa5.53□□□□□ -1.52
TPM1-225ENST00000560679 SPAG11AQ6PDA7 123 aa5.52□□□□□ -1.53
TPM1-225ENST00000560679 LINC00846Q9NV44 126 aa5.52□□□□□ -1.53
TPM1-225ENST00000560679 NDUFV3P56181 108 aaKnown RBP5.51□□□□□ -1.53
TPM1-225ENST00000560679 XP32Q5T750 250 aa5.51□□□□□ -1.53
TPM1-225ENST00000560679 DSCR8Q96T75 97 aa5.51□□□□□ -1.53
TPM1-225ENST00000560679 TRBV7-4A0A0J9YYF1 115 aa5.5□□□□□ -1.53
TPM1-225ENST00000560679 FAM19A1Q7Z5A9 133 aa5.5□□□□□ -1.53
TPM1-225ENST00000560679 USH2AO75445 5202 aa5.49□□□□□ -1.53
TPM1-225ENST00000560679 ATP5EP2Q5VTU8 51 aa5.49□□□□□ -1.53
TPM1-225ENST00000560679 Q8NBF4 154 aa5.49□□□□□ -1.53
TPM1-225ENST00000560679 Q9BRP9 147 aa5.49□□□□□ -1.53
TPM1-225ENST00000560679 SPRR4Q96PI1 79 aa5.48□□□□□ -1.53
TPM1-225ENST00000560679 ANAPC13Q9BS18 74 aa5.48□□□□□ -1.53
TPM1-225ENST00000560679 IGLV5-48A0A075B6I7 105 aa5.47□□□□□ -1.53
TPM1-225ENST00000560679 IGKV3D-7A0A0C4DH55 119 aa5.47□□□□□ -1.53
TPM1-225ENST00000560679 Q8N377 158 aa5.47□□□□□ -1.53
TPM1-225ENST00000560679 UBL5Q9BZL1 73 aa5.47□□□□□ -1.53
TPM1-225ENST00000560679 SSPOA2VEC9 5147 aa5.47□□□□□ -1.53
TPM1-225ENST00000560679 FAM236AA0A1B0GUQ0 79 aa5.45□□□□□ -1.54
TPM1-225ENST00000560679 FAM236BA0A1B0GV22 79 aa5.45□□□□□ -1.54
TPM1-225ENST00000560679 ERC2-IT1O76042 136 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms