RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 PRYO14603 147 aa8.9□□□□□ -0.98
CARMIL3-203ENST00000560349 C14orf177Q52M58 125 aa8.9□□□□□ -0.98
CARMIL3-203ENST00000560349 LY6G6CO95867 125 aa8.89□□□□□ -0.99
CARMIL3-203ENST00000560349 SPRR1AP35321 89 aa8.89□□□□□ -0.99
CARMIL3-203ENST00000560349 REG3GQ6UW15 175 aa8.89□□□□□ -0.99
CARMIL3-203ENST00000560349 C9orf163Q8N9P6 203 aa8.89□□□□□ -0.99
CARMIL3-203ENST00000560349 CXCL6P80162 114 aa8.88□□□□□ -0.99
CARMIL3-203ENST00000560349 Q8N377 158 aa8.88□□□□□ -0.99
CARMIL3-203ENST00000560349 FRAS1Q86XX4 4008 aa8.88□□□□□ -0.99
CARMIL3-203ENST00000560349 HYDINQ4G0P3 5121 aa8.88□□□□□ -0.99
CARMIL3-203ENST00000560349 SCXQ7RTU7 201 aa8.88□□□□□ -0.99
CARMIL3-203ENST00000560349 DNAH6Q9C0G6 4158 aa8.87□□□□□ -0.99
CARMIL3-203ENST00000560349 TRAV7A0A075B6U4 112 aa8.87□□□□□ -0.99
CARMIL3-203ENST00000560349 A0A087WTM6 91 aa8.86□□□□□ -0.99
CARMIL3-203ENST00000560349 BCE1O60756 84 aa8.86□□□□□ -0.99
CARMIL3-203ENST00000560349 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
CARMIL3-203ENST00000560349 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
CARMIL3-203ENST00000560349 DHRS4-AS1Q9P1J3 65 aa8.85□□□□□ -0.99
CARMIL3-203ENST00000560349 PMAIP1Q13794 54 aa8.84□□□□□ -0.99
CARMIL3-203ENST00000560349 Q6ZR54 194 aa8.83□□□□□ -1
CARMIL3-203ENST00000560349 A0A0G2JQZ4 141 aa8.83□□□□□ -1
CARMIL3-203ENST00000560349 SNURFQ9Y675 71 aa8.82□□□□□ -1
CARMIL3-203ENST00000560349 DNAH17Q9UFH2 4485 aa8.81□□□□□ -1
CARMIL3-203ENST00000560349 C3orf84H3BNL1 204 aa8.81□□□□□ -1
CARMIL3-203ENST00000560349 F8WEM9 126 aa8.8□□□□□ -1
CARMIL3-203ENST00000560349 MPLKIPQ8TAP9 179 aa8.8□□□□□ -1
CARMIL3-203ENST00000560349 RTL8CO15255 209 aa8.8□□□□□ -1
CARMIL3-203ENST00000560349 KLKP1Q107X0 134 aa8.79□□□□□ -1
CARMIL3-203ENST00000560349 Q8N9L7 120 aa8.79□□□□□ -1
CARMIL3-203ENST00000560349 DNAH8Q96JB1 4490 aa8.78□□□□□ -1
CARMIL3-203ENST00000560349 FAM229BQ4G0N7 80 aa8.78□□□□□ -1
CARMIL3-203ENST00000560349 C1orf134Q5TEV5 83 aa8.78□□□□□ -1
CARMIL3-203ENST00000560349 TNP2Q05952 138 aa8.76□□□□□ -1.01
CARMIL3-203ENST00000560349 SPACA4Q8TDM5 124 aa8.76□□□□□ -1.01
CARMIL3-203ENST00000560349 IGLV5-48A0A075B6I7 105 aa8.76□□□□□ -1.01
CARMIL3-203ENST00000560349 LINC00476Q8WZB0 136 aa8.76□□□□□ -1.01
CARMIL3-203ENST00000560349 DNAH11Q96DT5 4516 aa8.76□□□□□ -1.01
CARMIL3-203ENST00000560349 DNAH5Q8TE73 4624 aa8.75□□□□□ -1.01
CARMIL3-203ENST00000560349 IGKV4-1P06312 121 aa8.75□□□□□ -1.01
CARMIL3-203ENST00000560349 NREPQ16612 68 aa8.75□□□□□ -1.01
CARMIL3-203ENST00000560349 WWC2-AS2Q96NR7 200 aa8.74□□□□□ -1.01
CARMIL3-203ENST00000560349 BPY2O14599 106 aa8.74□□□□□ -1.01
CARMIL3-203ENST00000560349 UBE2AP49459 152 aa8.74□□□□□ -1.01
CARMIL3-203ENST00000560349 C1orf137Q5JT78 98 aa8.74□□□□□ -1.01
CARMIL3-203ENST00000560349 IGLV5-52A0A0A0MRZ9 124 aa8.73□□□□□ -1.01
CARMIL3-203ENST00000560349 SMIM29Q86T20 159 aa8.73□□□□□ -1.01
CARMIL3-203ENST00000560349 A0A1W2PNM2 257 aa8.72□□□□□ -1.01
CARMIL3-203ENST00000560349 KRTAP21-3Q3LHN1 58 aa8.71□□□□□ -1.01
CARMIL3-203ENST00000560349 CD164Q04900 197 aa8.71□□□□□ -1.02
CARMIL3-203ENST00000560349 PRR15Q8IV56 129 aa8.71□□□□□ -1.02
CARMIL3-203ENST00000560349 KRTAP10-2P60368 255 aa8.69□□□□□ -1.02
CARMIL3-203ENST00000560349 FAT2Q9NYQ8 4349 aa8.69□□□□□ -1.02
CARMIL3-203ENST00000560349 ALMS1Q8TCU4 4167 aa8.68□□□□□ -1.02
CARMIL3-203ENST00000560349 TMEM254Q8TBM7 123 aa8.67□□□□□ -1.02
CARMIL3-203ENST00000560349 OCR1Q9BZK8 76 aa8.67□□□□□ -1.02
CARMIL3-203ENST00000560349 PKD1P98161 4303 aa8.66□□□□□ -1.02
CARMIL3-203ENST00000560349 IGFL1Q6UW32 110 aa8.65□□□□□ -1.02
CARMIL3-203ENST00000560349 PKHD1P08F94 4074 aa8.65□□□□□ -1.02
CARMIL3-203ENST00000560349 NDUFC1O43677 76 aa8.65□□□□□ -1.03
CARMIL3-203ENST00000560349 ATP5EP56381 51 aaPredicted RBP8.65□□□□□ -1.03
CARMIL3-203ENST00000560349 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.03
CARMIL3-203ENST00000560349 Q8NBF4 154 aa8.64□□□□□ -1.03
CARMIL3-203ENST00000560349 FAM30AQ9NZY2 134 aa8.64□□□□□ -1.03
CARMIL3-203ENST00000560349 SACSQ9NZJ4 4579 aa8.63□□□□□ -1.03
CARMIL3-203ENST00000560349 KRTAP13-1Q8IUC0 172 aa8.63□□□□□ -1.03
CARMIL3-203ENST00000560349 DEFB116Q30KQ4 102 aa8.62□□□□□ -1.03
CARMIL3-203ENST00000560349 ANAPC11Q9NYG5 84 aa8.62□□□□□ -1.03
CARMIL3-203ENST00000560349 A0A1B0GW54 56 aa8.6□□□□□ -1.03
CARMIL3-203ENST00000560349 H0Y9J4 135 aa8.6□□□□□ -1.03
CARMIL3-203ENST00000560349 PLAC8Q9NZF1 115 aa8.6□□□□□ -1.03
CARMIL3-203ENST00000560349 SPRR4Q96PI1 79 aa8.6□□□□□ -1.03
CARMIL3-203ENST00000560349 LRP1BQ9NZR2 4599 aa8.6□□□□□ -1.03
CARMIL3-203ENST00000560349 IGLV9-49A0A0B4J1Y8 123 aa8.59□□□□□ -1.03
CARMIL3-203ENST00000560349 A0A087WSZ3 146 aa8.58□□□□□ -1.04
CARMIL3-203ENST00000560349 DSCR10P59022 87 aa8.58□□□□□ -1.04
CARMIL3-203ENST00000560349 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
CARMIL3-203ENST00000560349 CIRBP-AS1Q8TBR5 109 aa8.57□□□□□ -1.04
CARMIL3-203ENST00000560349 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
CARMIL3-203ENST00000560349 K7EQZ3 153 aa8.54□□□□□ -1.04
CARMIL3-203ENST00000560349 KMT2CQ8NEZ4 4911 aaKnown RBP8.53□□□□□ -1.04
CARMIL3-203ENST00000560349 SPRR1BP22528 89 aa8.53□□□□□ -1.04
CARMIL3-203ENST00000560349 RBM12B-AS1Q9P1G2 102 aa8.53□□□□□ -1.04
CARMIL3-203ENST00000560349 IGLV8-61A0A075B6I0 122 aa8.52□□□□□ -1.05
CARMIL3-203ENST00000560349 A8MU10 97 aa8.52□□□□□ -1.05
CARMIL3-203ENST00000560349 VPS13BQ7Z7G8 4022 aa8.52□□□□□ -1.05
CARMIL3-203ENST00000560349 LCE6AA0A183 80 aa8.51□□□□□ -1.05
CARMIL3-203ENST00000560349 PSPHP1O15172 72 aa8.5□□□□□ -1.05
CARMIL3-203ENST00000560349 ZNF861PO60384 105 aa8.5□□□□□ -1.05
CARMIL3-203ENST00000560349 RPL37AP61513 92 aaKnown RBP8.5□□□□□ -1.05
CARMIL3-203ENST00000560349 MOBPQ13875 183 aa8.48□□□□□ -1.05
CARMIL3-203ENST00000560349 Q1T7F1 81 aa8.47□□□□□ -1.05
CARMIL3-203ENST00000560349 IGLV7-43P04211 117 aa8.47□□□□□ -1.05
CARMIL3-203ENST00000560349 hDV103S1A0JD37 113 aa8.46□□□□□ -1.06
CARMIL3-203ENST00000560349 HCG22E2RYF7 251 aa8.45□□□□□ -1.06
CARMIL3-203ENST00000560349 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
CARMIL3-203ENST00000560349 KTN1-AS1Q86SY8 53 aa8.44□□□□□ -1.06
CARMIL3-203ENST00000560349 LINC00483Q53H64 154 aa8.43□□□□□ -1.06
CARMIL3-203ENST00000560349 TRAV22A0A0B4J277 110 aa8.42□□□□□ -1.06
CARMIL3-203ENST00000560349 Q6ZSA8 131 aa8.42□□□□□ -1.06
CARMIL3-203ENST00000560349 RYR2Q92736 4967 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms