RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 C9JAW5 83 aa3.99□□□□□ -1.77
SPG11-221ENST00000560299 F8W1H4 67 aa3.99□□□□□ -1.77
SPG11-221ENST00000560299 C1orf137Q5JT78 98 aa3.99□□□□□ -1.77
SPG11-221ENST00000560299 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.99□□□□□ -1.77
SPG11-221ENST00000560299 FAM218AQ96MZ4 157 aa3.99□□□□□ -1.77
SPG11-221ENST00000560299 ORMDL1Q9P0S3 153 aa3.99□□□□□ -1.77
SPG11-221ENST00000560299 PSORS1C2Q9UIG4 136 aa3.99□□□□□ -1.77
SPG11-221ENST00000560299 TMEM256-PLSCR3K7ERE1 68 aa3.98□□□□□ -1.77
SPG11-221ENST00000560299 HIGD2AQ9BW72 106 aa3.98□□□□□ -1.77
SPG11-221ENST00000560299 H3BT86 120 aa3.97□□□□□ -1.77
SPG11-221ENST00000560299 BAALC-AS2P0C853 105 aa3.97□□□□□ -1.77
SPG11-221ENST00000560299 PRLHP81277 87 aa3.97□□□□□ -1.77
SPG11-221ENST00000560299 Q6ZQY7 126 aa3.97□□□□□ -1.77
SPG11-221ENST00000560299 KRTAP11-1Q8IUC1 163 aa3.97□□□□□ -1.77
SPG11-221ENST00000560299 PPDPFLQ8WWR9 84 aa3.97□□□□□ -1.77
SPG11-221ENST00000560299 VPS13BQ7Z7G8 4022 aa3.97□□□□□ -1.77
SPG11-221ENST00000560299 ZNF861PO60384 105 aa3.96□□□□□ -1.78
SPG11-221ENST00000560299 IGLV7-43P04211 117 aa3.96□□□□□ -1.78
SPG11-221ENST00000560299 HAMPP81172 84 aa3.96□□□□□ -1.78
SPG11-221ENST00000560299 ANKRD29Q8N6D5 301 aa3.96□□□□□ -1.78
SPG11-221ENST00000560299 SMCR5Q8TEV8 140 aa3.96□□□□□ -1.78
SPG11-221ENST00000560299 Q9BRP9 147 aa3.96□□□□□ -1.78
SPG11-221ENST00000560299 ZNF706Q9Y5V0 76 aaPredicted RBP3.96□□□□□ -1.78
SPG11-221ENST00000560299 TEX49A0A1B0GTD5 131 aa3.95□□□□□ -1.78
SPG11-221ENST00000560299 RPL37AP61513 92 aaKnown RBP3.95□□□□□ -1.78
SPG11-221ENST00000560299 JMJD7-PLA2G4BH0Y9G9 81 aa3.94□□□□□ -1.78
SPG11-221ENST00000560299 PLA2G1BP04054 148 aaKnown RBP3.94□□□□□ -1.78
SPG11-221ENST00000560299 KRTAP13-1Q8IUC0 172 aa3.94□□□□□ -1.78
SPG11-221ENST00000560299 MTURNQ8N3F0 131 aa3.94□□□□□ -1.78
SPG11-221ENST00000560299 DEFB105AQ8NG35 78 aa3.94□□□□□ -1.78
SPG11-221ENST00000560299 LAMTOR3Q9UHA4 124 aa3.94□□□□□ -1.78
SPG11-221ENST00000560299 F8WEM9 126 aa3.93□□□□□ -1.78
SPG11-221ENST00000560299 ERC2-IT1O76042 136 aa3.93□□□□□ -1.78
SPG11-221ENST00000560299 LINC01600Q96MT4 127 aa3.93□□□□□ -1.78
SPG11-221ENST00000560299 PRO0461Q9UI25 63 aa3.93□□□□□ -1.78
SPG11-221ENST00000560299 IGLV5-48A0A075B6I7 105 aa3.92□□□□□ -1.78
SPG11-221ENST00000560299 SMR3BP02814 79 aaPredicted RBP3.92□□□□□ -1.78
SPG11-221ENST00000560299 GAGE2AQ6NT46 116 aa3.92□□□□□ -1.78
SPG11-221ENST00000560299 TEN1Q86WV5 123 aa3.92□□□□□ -1.78
SPG11-221ENST00000560299 ST20-AS1Q8NBB2 130 aa3.92□□□□□ -1.78
SPG11-221ENST00000560299 SPRR1BP22528 89 aa3.91□□□□□ -1.78
SPG11-221ENST00000560299 NDUFV3P56181 108 aaKnown RBP3.91□□□□□ -1.78
SPG11-221ENST00000560299 KRTAP10-4P60372 401 aaPredicted RBP3.91□□□□□ -1.78
SPG11-221ENST00000560299 RBM3P98179 157 aaKnown RBP3.91□□□□□ -1.78
SPG11-221ENST00000560299 ETDBQ3ZM63 59 aa3.91□□□□□ -1.78
SPG11-221ENST00000560299 SPINK6Q6UWN8 80 aa3.91□□□□□ -1.78
SPG11-221ENST00000560299 Q8N377 158 aa3.91□□□□□ -1.78
SPG11-221ENST00000560299 J3QR89 54 aa3.9□□□□□ -1.79
SPG11-221ENST00000560299 PDE6GP18545 87 aa3.9□□□□□ -1.79
SPG11-221ENST00000560299 LINC01547P58512 204 aaPredicted RBP3.9□□□□□ -1.79
SPG11-221ENST00000560299 Q5VSD8 79 aa3.9□□□□□ -1.79
SPG11-221ENST00000560299 SPRR4Q96PI1 79 aa3.9□□□□□ -1.79
SPG11-221ENST00000560299 DSCR8Q96T75 97 aa3.9□□□□□ -1.79
SPG11-221ENST00000560299 DMBT1Q9UGM3 2413 aaPredicted RBP3.9□□□□□ -1.79
SPG11-221ENST00000560299 MYCBP2O75592 4640 aa3.9□□□□□ -1.79
SPG11-221ENST00000560299 LINC00483Q53H64 154 aa3.88□□□□□ -1.79
SPG11-221ENST00000560299 OBSCN-AS1Q96MR7 158 aa3.88□□□□□ -1.79
SPG11-221ENST00000560299 OXTP01178 125 aa3.87□□□□□ -1.79
SPG11-221ENST00000560299 FAM229BQ4G0N7 80 aa3.87□□□□□ -1.79
SPG11-221ENST00000560299 Q6JHZ5 121 aa3.87□□□□□ -1.79
SPG11-221ENST00000560299 C3orf22Q8N5N4 141 aa3.87□□□□□ -1.79
SPG11-221ENST00000560299 IGLV8-61A0A075B6I0 122 aa3.86□□□□□ -1.79
SPG11-221ENST00000560299 LOC110117498A0A087WWA1 95 aa3.86□□□□□ -1.79
SPG11-221ENST00000560299 A0A1B0GV72 72 aa3.86□□□□□ -1.79
SPG11-221ENST00000560299 KRTAP29-1A8MX34 341 aaPredicted RBP3.86□□□□□ -1.79
SPG11-221ENST00000560299 K7ERU9 68 aa3.86□□□□□ -1.79
SPG11-221ENST00000560299 CRYGAP11844 174 aa3.86□□□□□ -1.79
SPG11-221ENST00000560299 C9orf153Q5TBE3 101 aa3.86□□□□□ -1.79
SPG11-221ENST00000560299 SMIM29Q86T20 159 aa3.86□□□□□ -1.79
SPG11-221ENST00000560299 C14orf132Q9NPU4 83 aa3.86□□□□□ -1.79
SPG11-221ENST00000560299 PKHD1L1Q86WI1 4243 aa3.85□□□□□ -1.79
SPG11-221ENST00000560299 IGLV9-49A0A0B4J1Y8 123 aa3.85□□□□□ -1.79
SPG11-221ENST00000560299 SSBP3-AS1Q7Z2R9 100 aa3.85□□□□□ -1.79
SPG11-221ENST00000560299 Q8NBF4 154 aa3.85□□□□□ -1.79
SPG11-221ENST00000560299 FLG2Q5D862 2391 aaPredicted RBP3.85□□□□□ -1.79
SPG11-221ENST00000560299 TRBV7-4A0A0J9YYF1 115 aa3.84□□□□□ -1.79
SPG11-221ENST00000560299 A0A1B0GW54 56 aa3.84□□□□□ -1.79
SPG11-221ENST00000560299 CCKP06307 115 aa3.84□□□□□ -1.79
SPG11-221ENST00000560299 ACYP1P07311 99 aa3.84□□□□□ -1.79
SPG11-221ENST00000560299 ANAPC11Q9NYG5 84 aa3.84□□□□□ -1.79
SPG11-221ENST00000560299 HERC1Q15751 4861 aa3.84□□□□□ -1.79
SPG11-221ENST00000560299 FAT3Q8TDW7 4589 aa3.83□□□□□ -1.8
SPG11-221ENST00000560299 MOBPQ13875 183 aa3.83□□□□□ -1.8
SPG11-221ENST00000560299 Q6ZQT0 140 aa3.83□□□□□ -1.8
SPG11-221ENST00000560299 VPS25Q9BRG1 176 aa3.83□□□□□ -1.8
SPG11-221ENST00000560299 FAM240AA0A1B0GVK7 77 aa3.82□□□□□ -1.8
SPG11-221ENST00000560299 KRTAP1-4P0C5Y4 121 aa3.82□□□□□ -1.8
SPG11-221ENST00000560299 IGFL1Q6UW32 110 aa3.82□□□□□ -1.8
SPG11-221ENST00000560299 TYMSOSQ8TAI1 123 aa3.82□□□□□ -1.8
SPG11-221ENST00000560299 LRP1Q07954 4544 aaKnown RBP3.82□□□□□ -1.8
SPG11-221ENST00000560299 Q6Q795 121 aa3.81□□□□□ -1.8
SPG11-221ENST00000560299 A0A087X002 238 aa3.8□□□□□ -1.8
SPG11-221ENST00000560299 CD164Q04900 197 aa3.8□□□□□ -1.8
SPG11-221ENST00000560299 UBL5Q9BZL1 73 aa3.8□□□□□ -1.8
SPG11-221ENST00000560299 A0A1W2PNM2 257 aa3.79□□□□□ -1.8
SPG11-221ENST00000560299 KRTAP13-2Q52LG2 175 aa3.79□□□□□ -1.8
SPG11-221ENST00000560299 SPAG11AQ6PDA7 123 aa3.79□□□□□ -1.8
SPG11-221ENST00000560299 SS18L2Q9UHA2 77 aa3.79□□□□□ -1.8
SPG11-221ENST00000560299 TRBV7-7A0A0K0K1E9 115 aa3.78□□□□□ -1.8
SPG11-221ENST00000560299 NREPQ16612 68 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms