RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 CCKP06307 115 aa12.4□□□□□ -0.43
SNRPA1-205ENST00000558036 TRBV7-4A0A0J9YYF1 115 aa12.39□□□□□ -0.43
SNRPA1-205ENST00000558036 XGP55808 180 aa12.39□□□□□ -0.43
SNRPA1-205ENST00000558036 LOC110117498A0A087WWA1 95 aa12.38□□□□□ -0.43
SNRPA1-205ENST00000558036 FAM240AA0A1B0GVK7 77 aa12.37□□□□□ -0.43
SNRPA1-205ENST00000558036 SPRR4Q96PI1 79 aa12.35□□□□□ -0.43
SNRPA1-205ENST00000558036 A0A0G2JQZ4 141 aa12.34□□□□□ -0.43
SNRPA1-205ENST00000558036 SPRR1BP22528 89 aa12.34□□□□□ -0.43
SNRPA1-205ENST00000558036 FAT1Q14517 4588 aa12.34□□□□□ -0.43
SNRPA1-205ENST00000558036 SMR3BP02814 79 aaPredicted RBP12.34□□□□□ -0.43
SNRPA1-205ENST00000558036 ANAPC11Q9NYG5 84 aa12.34□□□□□ -0.43
SNRPA1-205ENST00000558036 F8WEM9 126 aa12.32□□□□□ -0.44
SNRPA1-205ENST00000558036 ACYP1P07311 99 aa12.32□□□□□ -0.44
SNRPA1-205ENST00000558036 LINC00846Q9NV44 126 aa12.32□□□□□ -0.44
SNRPA1-205ENST00000558036 PDE6GP18545 87 aa12.3□□□□□ -0.44
SNRPA1-205ENST00000558036 ZNF706Q9Y5V0 76 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-205ENST00000558036 LINC00483Q53H64 154 aa12.27□□□□□ -0.45
SNRPA1-205ENST00000558036 IGLV9-49A0A0B4J1Y8 123 aa12.26□□□□□ -0.45
SNRPA1-205ENST00000558036 IGFL1Q6UW32 110 aa12.25□□□□□ -0.45
SNRPA1-205ENST00000558036 A0A1W2PNM2 257 aa12.25□□□□□ -0.45
SNRPA1-205ENST00000558036 IGLV8-61A0A075B6I0 122 aa12.23□□□□□ -0.45
SNRPA1-205ENST00000558036 MT-ATP8P03928 68 aa12.23□□□□□ -0.45
SNRPA1-205ENST00000558036 EPPK1P58107 5090 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-205ENST00000558036 RPL37AP61513 92 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-205ENST00000558036 C9orf153Q5TBE3 101 aa12.2□□□□□ -0.46
SNRPA1-205ENST00000558036 Q8NBF4 154 aa12.19□□□□□ -0.46
SNRPA1-205ENST00000558036 SIGMAR1Q99720 223 aa12.19□□□□□ -0.46
SNRPA1-205ENST00000558036 MOBPQ13875 183 aa12.17□□□□□ -0.46
SNRPA1-205ENST00000558036 HSPG2P98160 4391 aa12.16□□□□□ -0.46
SNRPA1-205ENST00000558036 LINC00643Q86TS7 51 aa12.15□□□□□ -0.46
SNRPA1-205ENST00000558036 UBL5Q9BZL1 73 aa12.15□□□□□ -0.46
SNRPA1-205ENST00000558036 Q6JHZ5 121 aa12.14□□□□□ -0.47
SNRPA1-205ENST00000558036 Q6ZVQ6 151 aa12.13□□□□□ -0.47
SNRPA1-205ENST00000558036 RYR1P21817 5038 aa12.12□□□□□ -0.47
SNRPA1-205ENST00000558036 A0A087X002 238 aa12.11□□□□□ -0.47
SNRPA1-205ENST00000558036 CRYGAP11844 174 aa12.11□□□□□ -0.47
SNRPA1-205ENST00000558036 KRTAP10-4P60372 401 aaPredicted RBP12.11□□□□□ -0.47
SNRPA1-205ENST00000558036 IGKV3D-7A0A0C4DH55 119 aa12.11□□□□□ -0.47
SNRPA1-205ENST00000558036 C21orf62-AS1Q17RA5 79 aa12.11□□□□□ -0.47
SNRPA1-205ENST00000558036 KRTAP1-4P0C5Y4 121 aa12.1□□□□□ -0.47
SNRPA1-205ENST00000558036 KIAA1109Q2LD37 5005 aa12.09□□□□□ -0.47
SNRPA1-205ENST00000558036 HRCT1Q6UXD1 115 aa12.08□□□□□ -0.47
SNRPA1-205ENST00000558036 A0A087WSZ3 146 aa12.08□□□□□ -0.48
SNRPA1-205ENST00000558036 SPINK6Q6UWN8 80 aa12.07□□□□□ -0.48
SNRPA1-205ENST00000558036 NREPQ16612 68 aa12.06□□□□□ -0.48
SNRPA1-205ENST00000558036 KRTAP13-2Q52LG2 175 aa12.05□□□□□ -0.48
SNRPA1-205ENST00000558036 CDK2AP2O75956 126 aa12.04□□□□□ -0.48
SNRPA1-205ENST00000558036 A0A1B0GW54 56 aa12.04□□□□□ -0.48
SNRPA1-205ENST00000558036 PLA2G1BP04054 148 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-205ENST00000558036 Q6Q795 121 aa12.02□□□□□ -0.49
SNRPA1-205ENST00000558036 FAM229BQ4G0N7 80 aa12.01□□□□□ -0.49
SNRPA1-205ENST00000558036 TRBV7-7A0A0K0K1E9 115 aa12□□□□□ -0.49
SNRPA1-205ENST00000558036 FAM229AH3BQW9 127 aa11.99□□□□□ -0.49
SNRPA1-205ENST00000558036 KRTAP17-1Q9BYP8 105 aa11.98□□□□□ -0.49
SNRPA1-205ENST00000558036 DEFB116Q30KQ4 102 aa11.97□□□□□ -0.49
SNRPA1-205ENST00000558036 Q5VSD8 79 aa11.96□□□□□ -0.49
SNRPA1-205ENST00000558036 ATP5EP2Q5VTU8 51 aa11.96□□□□□ -0.5
SNRPA1-205ENST00000558036 HIST1H4AP62805 103 aaKnown RBP11.95□□□□□ -0.5
SNRPA1-205ENST00000558036 SSBP3-AS1Q7Z2R9 100 aa11.95□□□□□ -0.5
SNRPA1-205ENST00000558036 A0A087WVE0 104 aa11.94□□□□□ -0.5
SNRPA1-205ENST00000558036 BPY2O14599 106 aa11.93□□□□□ -0.5
SNRPA1-205ENST00000558036 PRR26Q8N8Z3 221 aa11.93□□□□□ -0.5
SNRPA1-205ENST00000558036 Q8N9L7 120 aa11.93□□□□□ -0.5
SNRPA1-205ENST00000558036 CXCL6P80162 114 aa11.93□□□□□ -0.5
SNRPA1-205ENST00000558036 IMUPQ9GZP8 106 aa11.92□□□□□ -0.5
SNRPA1-205ENST00000558036 PKHD1L1Q86WI1 4243 aa11.89□□□□□ -0.51
SNRPA1-205ENST00000558036 TYMSOSQ8TAI1 123 aa11.89□□□□□ -0.51
SNRPA1-205ENST00000558036 LRP1Q07954 4544 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-205ENST00000558036 DSCR10P59022 87 aa11.86□□□□□ -0.51
SNRPA1-205ENST00000558036 LINC00472Q9H8W2 130 aa11.86□□□□□ -0.51
SNRPA1-205ENST00000558036 FAM236AA0A1B0GUQ0 79 aa11.84□□□□□ -0.51
SNRPA1-205ENST00000558036 FAM236BA0A1B0GV22 79 aa11.84□□□□□ -0.51
SNRPA1-205ENST00000558036 CD164Q04900 197 aa11.84□□□□□ -0.51
SNRPA1-205ENST00000558036 Q96NJ1 140 aa11.83□□□□□ -0.52
SNRPA1-205ENST00000558036 SS18L2Q9UHA2 77 aa11.83□□□□□ -0.52
SNRPA1-205ENST00000558036 SCGB1A1P11684 91 aa11.82□□□□□ -0.52
SNRPA1-205ENST00000558036 IGKV4-1P06312 121 aa11.81□□□□□ -0.52
SNRPA1-205ENST00000558036 K7EQZ3 153 aa11.81□□□□□ -0.52
SNRPA1-205ENST00000558036 Q8N1X5 172 aa11.79□□□□□ -0.52
SNRPA1-205ENST00000558036 MYCBP2O75592 4640 aa11.77□□□□□ -0.53
SNRPA1-205ENST00000558036 C4orf48Q5BLP8 95 aa11.75□□□□□ -0.53
SNRPA1-205ENST00000558036 LINC00304Q8N9R0 145 aa11.74□□□□□ -0.53
SNRPA1-205ENST00000558036 PCP4P48539 62 aa11.73□□□□□ -0.53
SNRPA1-205ENST00000558036 FAT3Q8TDW7 4589 aa11.72□□□□□ -0.53
SNRPA1-205ENST00000558036 A8MWP4 228 aa11.71□□□□□ -0.54
SNRPA1-205ENST00000558036 TNXBP22105 4242 aa11.7□□□□□ -0.54
SNRPA1-205ENST00000558036 FLG2Q5D862 2391 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-205ENST00000558036 SPINK1P00995 79 aa11.69□□□□□ -0.54
SNRPA1-205ENST00000558036 J3KT08 172 aa11.69□□□□□ -0.54
SNRPA1-205ENST00000558036 PRR15Q8IV56 129 aa11.67□□□□□ -0.54
SNRPA1-205ENST00000558036 BIRC6Q9NR09 4857 aa11.67□□□□□ -0.54
SNRPA1-205ENST00000558036 Q5XG85 94 aa11.66□□□□□ -0.54
SNRPA1-205ENST00000558036 LIMD2Q9BT23 127 aa11.66□□□□□ -0.54
SNRPA1-205ENST00000558036 ASB16-AS1Q495Z4 193 aa11.66□□□□□ -0.54
SNRPA1-205ENST00000558036 ANAPC13Q9BS18 74 aa11.66□□□□□ -0.54
SNRPA1-205ENST00000558036 C1orf195Q5TG92 126 aa11.65□□□□□ -0.54
SNRPA1-205ENST00000558036 KRTAP4-5Q9BYR2 181 aa11.65□□□□□ -0.54
SNRPA1-205ENST00000558036 SPAG11AQ6PDA7 123 aa11.63□□□□□ -0.55
SNRPA1-205ENST00000558036 NDUFB1O75438 58 aa11.62□□□□□ -0.55
SNRPA1-205ENST00000558036 IGHV6-1A0A0B4J1U7 121 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms