RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CDKN2A-AS1Q9UH64 79 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 ZFP30Q9Y2G7 519 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 V9GYH0 126 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 A0A1W2PRE2 83 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 SPINK8P0C7L1 97 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 IGLC6P0CF74 106 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 S100A5P33763 92 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 IFI27P40305 119 aaPredicted RBP0.53□□□□□ -2.32
PRPF39-208ENST00000554785 MT4P47944 62 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 NPC2P61916 151 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 CTAG1AP78358 180 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 BATFQ16520 125 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 SMIM15Q7Z3B0 74 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 DEFB105AQ8NG35 78 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 Q96NJ1 140 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 LIMD2Q9BT23 127 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 Q9H521 79 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 GNG13Q9P2W3 67 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 HSPB11Q9Y547 144 aa0.53□□□□□ -2.32
PRPF39-208ENST00000554785 CTXND1A0A1B0GTU2 59 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 FAM236AA0A1B0GUQ0 79 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 FAM236BA0A1B0GV22 79 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 D6R8Y8 96 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 LYRM1O43325 122 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 PFDN1O60925 122 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 MPC2O95563 127 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 IL7P13232 177 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 GNG4P50150 75 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 AKR1C8PQ5T2L2 129 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 C1orf195Q5TG92 126 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 KTN1-AS1Q86SY8 53 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 Q8IZM0 81 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 FAM213BQ8TBF2 198 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 SFT2D1Q8WV19 159 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 TRAV7A0A075B6U4 112 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 TRBV27A0A0K0K1C4 114 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 TRBV10-3A0A0K0K1G6 114 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 A8MUN3 132 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 HIGD1CA8MV81 97 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 PLA2G10O15496 165 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 POLR2KP53803 58 aaKnown RBP0.52□□□□□ -2.33
PRPF39-208ENST00000554785 Q5BKY6 102 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 COA5Q86WW8 74 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 KRTAP8-1Q8IUC2 63 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 KCNRGQ8N5I3 272 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 COX7B2Q8TF08 81 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 TMEM141Q96I45 108 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 C2orf88Q9BSF0 95 aa0.52□□□□□ -2.33
PRPF39-208ENST00000554785 BORCS7-ASMTA0A0B4J1R7 106 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 LOC107984156A0A0G2JMH3 177 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 NAP1L6A6NFF2 107 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 HMSDA8MTL9 139 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 F2Z2F3 143 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 H3BT86 120 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 LST1O00453 97 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 ARPC5O15511 151 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 CXCL1P09341 107 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 CKS2P33552 79 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 NDUFA6P56556 154 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 LINC00158P58513 81 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 HIST1H4AP62805 103 aaKnown RBP0.51□□□□□ -2.33
PRPF39-208ENST00000554785 FABP9Q0Z7S8 132 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 MEIG1Q5JSS6 88 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 MRPL54Q6P161 138 aaKnown RBP0.51□□□□□ -2.33
PRPF39-208ENST00000554785 ARL17AQ8IVW1 177 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 C9orf62Q8N4C0 152 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 BORCS7Q96B45 105 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 SMIM2Q9BVW6 85 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 ERG28Q9UKR5 140 aa0.51□□□□□ -2.33
PRPF39-208ENST00000554785 LEPROTO15243 131 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 PPP1R17O96001 155 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 PPBPP02775 128 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 MT1BP07438 61 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 ADCYAP1P18509 176 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 RPS29P62273 56 aaKnown RBP0.5□□□□□ -2.33
PRPF39-208ENST00000554785 CCL20P78556 96 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 SERF2P84101 59 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 TEX261Q6UWH6 196 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 Q6ZRX8 168 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 SSBP3-AS1Q7Z2R9 100 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 WFDC13Q8IUB5 93 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 NAA38Q9BRA0 125 aaKnown RBP0.5□□□□□ -2.33
PRPF39-208ENST00000554785 PSMG3Q9BT73 122 aaPredicted RBP0.5□□□□□ -2.33
PRPF39-208ENST00000554785 CST9LQ9H4G1 147 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 SPANXA1Q9NS26 97 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 NAT8Q9UHE5 227 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 TNFSF18Q9UNG2 199 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 TRBV6-5A0A0K0K1A5 114 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 A0A1B0GUT8 65 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 A0A1B0GV72 72 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 SRP19P09132 144 aaKnown RBP0.5□□□□□ -2.33
PRPF39-208ENST00000554785 SMIM13P0DJ93 91 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 RBM3P98179 157 aaKnown RBP0.5□□□□□ -2.33
PRPF39-208ENST00000554785 S100A7L2Q5SY68 101 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 Q5VV11 94 aa0.5□□□□□ -2.33
PRPF39-208ENST00000554785 TRAV23DV6A0A075B6W5 121 aa0.49□□□□□ -2.33
PRPF39-208ENST00000554785 F8W036 122 aa0.49□□□□□ -2.33
PRPF39-208ENST00000554785 S100A12P80511 92 aa0.49□□□□□ -2.33
PRPF39-208ENST00000554785 PMCHL1Q16048 86 aa0.49□□□□□ -2.33
PRPF39-208ENST00000554785 TMEM170BQ5T4T1 132 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms