RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 FASNP49327 2511 aaKnown RBP1.66□□□□□ -2.14
PRPF39-207ENST00000554439 A0A0G2JQZ4 141 aa1.65□□□□□ -2.14
PRPF39-207ENST00000554439 A0A1W2PNN7 141 aa1.65□□□□□ -2.14
PRPF39-207ENST00000554439 IGKV2-30P06310 120 aa1.65□□□□□ -2.14
PRPF39-207ENST00000554439 PRR4Q16378 134 aa1.65□□□□□ -2.14
PRPF39-207ENST00000554439 C15orf56Q8N910 161 aa1.65□□□□□ -2.14
PRPF39-207ENST00000554439 SRRM2Q9UQ35 2752 aaKnown RBP1.65□□□□□ -2.14
PRPF39-207ENST00000554439 HELZ2Q9BYK8 2649 aaKnown RBP1.65□□□□□ -2.15
PRPF39-207ENST00000554439 RPL37AP8A6NKH3 93 aa1.65□□□□□ -2.15
PRPF39-207ENST00000554439 M0R378 163 aa1.65□□□□□ -2.15
PRPF39-207ENST00000554439 ESRGQ1W209 222 aa1.65□□□□□ -2.15
PRPF39-207ENST00000554439 KRTAP26-1Q6PEX3 210 aa1.65□□□□□ -2.15
PRPF39-207ENST00000554439 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.15
PRPF39-207ENST00000554439 ST20-AS1Q8NBB2 130 aa1.65□□□□□ -2.15
PRPF39-207ENST00000554439 FBN1P35555 2871 aaKnown RBP1.65□□□□□ -2.15
PRPF39-207ENST00000554439 DNAH10Q8IVF4 4471 aa1.65□□□□□ -2.15
PRPF39-207ENST00000554439 A0A1W2PNM2 257 aa1.65□□□□□ -2.15
PRPF39-207ENST00000554439 FAM168BA1KXE4 195 aa1.65□□□□□ -2.15
PRPF39-207ENST00000554439 H3BQ85 93 aa1.65□□□□□ -2.15
PRPF39-207ENST00000554439 ERC2-IT1O76042 136 aa1.65□□□□□ -2.15
PRPF39-207ENST00000554439 ATP5EP56381 51 aaPredicted RBP1.65□□□□□ -2.15
PRPF39-207ENST00000554439 KPRPQ5T749 579 aaPredicted RBP1.65□□□□□ -2.15
PRPF39-207ENST00000554439 K7EQZ3 153 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 SPART-AS1P0CW21 52 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 EGFEM1PQ0D2K5 195 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 DEFB116Q30KQ4 102 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 LCE1AQ5T7P2 110 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 C1orf195Q5TG92 126 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 C1orf64Q8NEQ6 169 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 Q9BRP9 147 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 RETNQ9HD89 108 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 DNAH1Q9P2D7 4330 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 CMYA5Q8N3K9 4069 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 A8MU10 97 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 PSPHP1O15172 72 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 KRTAP21-3Q3LHN1 58 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 C7orf33Q8WU49 177 aa1.64□□□□□ -2.15
PRPF39-207ENST00000554439 IGLV5-48A0A075B6I7 105 aa1.63□□□□□ -2.15
PRPF39-207ENST00000554439 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.63□□□□□ -2.15
PRPF39-207ENST00000554439 IGKV2D-24A0A075B6R9 120 aa1.63□□□□□ -2.15
PRPF39-207ENST00000554439 hDV103S1A0JD37 113 aa1.63□□□□□ -2.15
PRPF39-207ENST00000554439 APOC4P55056 127 aa1.63□□□□□ -2.15
PRPF39-207ENST00000554439 DSCR10P59022 87 aa1.63□□□□□ -2.15
PRPF39-207ENST00000554439 C1orf137Q5JT78 98 aa1.63□□□□□ -2.15
PRPF39-207ENST00000554439 NKAPP1Q8N9T2 125 aa1.63□□□□□ -2.15
PRPF39-207ENST00000554439 KCNQ1DNQ9H478 68 aa1.63□□□□□ -2.15
PRPF39-207ENST00000554439 FLNBO75369 2602 aaKnown RBP1.63□□□□□ -2.15
PRPF39-207ENST00000554439 COL7A1Q02388 2944 aa1.63□□□□□ -2.15
PRPF39-207ENST00000554439 REG3GQ6UW15 175 aa1.63□□□□□ -2.15
PRPF39-207ENST00000554439 HECTD1Q9ULT8 2610 aa1.63□□□□□ -2.15
PRPF39-207ENST00000554439 NSD1Q96L73 2696 aaPredicted RBP1.63□□□□□ -2.15
PRPF39-207ENST00000554439 SYCNQ0VAF6 134 aa1.62□□□□□ -2.15
PRPF39-207ENST00000554439 CASC10Q5T4H9 136 aa1.62□□□□□ -2.15
PRPF39-207ENST00000554439 Q6ZRX8 168 aa1.62□□□□□ -2.15
PRPF39-207ENST00000554439 KRTAP7-1Q8IUC3 87 aa1.62□□□□□ -2.15
PRPF39-207ENST00000554439 LCE6AA0A183 80 aa1.62□□□□□ -2.15
PRPF39-207ENST00000554439 KRTAP4-16G5E9R7 235 aaPredicted RBP1.62□□□□□ -2.15
PRPF39-207ENST00000554439 RPL37AP61513 92 aaKnown RBP1.62□□□□□ -2.15
PRPF39-207ENST00000554439 Q8N9P0 234 aaPredicted RBP1.62□□□□□ -2.15
PRPF39-207ENST00000554439 Q8NBF4 154 aa1.62□□□□□ -2.15
PRPF39-207ENST00000554439 ZCCHC13Q8WW36 166 aaKnown RBP1.62□□□□□ -2.15
PRPF39-207ENST00000554439 V9GYY9 64 aa1.62□□□□□ -2.15
PRPF39-207ENST00000554439 MAST4O15021 2626 aa1.62□□□□□ -2.15
PRPF39-207ENST00000554439 TRAV22A0A0B4J277 110 aa1.62□□□□□ -2.15
PRPF39-207ENST00000554439 ETDCA0A1B0GVM5 59 aa1.62□□□□□ -2.15
PRPF39-207ENST00000554439 WFDC13Q8IUB5 93 aa1.62□□□□□ -2.15
PRPF39-207ENST00000554439 NOTCH1P46531 2555 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 IGLV1-50A0A075B6I6 118 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 A8MUN3 132 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 PSCAO43653 123 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 UBE2BP63146 152 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 Q1T7F1 81 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 SPRR4Q96PI1 79 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 FRAS1Q86XX4 4008 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 DNAH9Q9NYC9 4486 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 DNAH7Q8WXX0 4024 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 HCG22E2RYF7 251 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 PRR15Q8IV56 129 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 DHRS4-AS1Q9P1J3 65 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 COL6A5A8TX70 2615 aa1.61□□□□□ -2.15
PRPF39-207ENST00000554439 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
PRPF39-207ENST00000554439 SPRR1AP35321 89 aa1.6□□□□□ -2.15
PRPF39-207ENST00000554439 STAB1Q9NY15 2570 aa1.6□□□□□ -2.15
PRPF39-207ENST00000554439 TENM2Q9NT68 2774 aa1.6□□□□□ -2.15
PRPF39-207ENST00000554439 A0A087WSZ3 146 aa1.6□□□□□ -2.15
PRPF39-207ENST00000554439 PRLHP81277 87 aa1.6□□□□□ -2.15
PRPF39-207ENST00000554439 LINC01556Q5JQF7 62 aa1.6□□□□□ -2.15
PRPF39-207ENST00000554439 IGFL1Q6UW32 110 aa1.6□□□□□ -2.15
PRPF39-207ENST00000554439 MRPL55Q7Z7F7 128 aaKnown RBP1.6□□□□□ -2.15
PRPF39-207ENST00000554439 LINC00208Q96KT6 92 aa1.6□□□□□ -2.15
PRPF39-207ENST00000554439 PMAIP1Q13794 54 aa1.59□□□□□ -2.15
PRPF39-207ENST00000554439 KRTAP24-1Q3LI83 254 aa1.59□□□□□ -2.15
PRPF39-207ENST00000554439 KRTAP4-3Q9BYR4 195 aa1.59□□□□□ -2.15
PRPF39-207ENST00000554439 KMT2BQ9UMN6 2715 aaPredicted RBP1.59□□□□□ -2.15
PRPF39-207ENST00000554439 NBEAL1Q6ZS30 2694 aa1.59□□□□□ -2.15
PRPF39-207ENST00000554439 DEFB131BA0A096LNP1 70 aa1.59□□□□□ -2.15
PRPF39-207ENST00000554439 Q5VV11 94 aa1.59□□□□□ -2.15
PRPF39-207ENST00000554439 B9D2Q9BPU9 175 aa1.59□□□□□ -2.15
PRPF39-207ENST00000554439 CYP4F30PQ9H0H9 118 aa1.59□□□□□ -2.15
PRPF39-207ENST00000554439 DNAH3Q8TD57 4116 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms