RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CELA1Q9UNI1 258 aa3.89□□□□□ -1.79
VPS33B-203ENST00000554264 PRR3P79522 188 aaKnown RBP3.88□□□□□ -1.79
VPS33B-203ENST00000554264 HIGD2BQ4VC39 106 aa3.88□□□□□ -1.79
VPS33B-203ENST00000554264 Q5XG85 94 aa3.88□□□□□ -1.79
VPS33B-203ENST00000554264 CLPSL2Q6UWE3 100 aa3.88□□□□□ -1.79
VPS33B-203ENST00000554264 UNQ6190/PRO20217Q6UXQ8 127 aa3.88□□□□□ -1.79
VPS33B-203ENST00000554264 C11orf45Q8TAV5 145 aa3.88□□□□□ -1.79
VPS33B-203ENST00000554264 CYSTM1Q9H1C7 97 aa3.88□□□□□ -1.79
VPS33B-203ENST00000554264 DHRS4-AS1Q9P1J3 65 aa3.88□□□□□ -1.79
VPS33B-203ENST00000554264 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
VPS33B-203ENST00000554264 KMT2AQ03164 3969 aa3.88□□□□□ -1.79
VPS33B-203ENST00000554264 DNAH10Q8IVF4 4471 aa3.87□□□□□ -1.79
VPS33B-203ENST00000554264 HECTD4Q9Y4D8 3996 aa3.87□□□□□ -1.79
VPS33B-203ENST00000554264 BPY2O14599 106 aa3.87□□□□□ -1.79
VPS33B-203ENST00000554264 VPREB1P12018 145 aa3.87□□□□□ -1.79
VPS33B-203ENST00000554264 FUSP35637 526 aaKnown RBP eCLIP3.87□□□□□ -1.79
VPS33B-203ENST00000554264 NREPQ16612 68 aa3.87□□□□□ -1.79
VPS33B-203ENST00000554264 TMEM254Q8TBM7 123 aa3.87□□□□□ -1.79
VPS33B-203ENST00000554264 CAMK2N2Q96S95 79 aa3.87□□□□□ -1.79
VPS33B-203ENST00000554264 C6orf48Q9UBA6 75 aa3.87□□□□□ -1.79
VPS33B-203ENST00000554264 APLNQ9ULZ1 77 aa3.87□□□□□ -1.79
VPS33B-203ENST00000554264 IGLV10-54A0A075B6I4 117 aa3.86□□□□□ -1.79
VPS33B-203ENST00000554264 C9orf116Q5BN46 136 aaPredicted RBP3.86□□□□□ -1.79
VPS33B-203ENST00000554264 Q75L30 129 aa3.86□□□□□ -1.79
VPS33B-203ENST00000554264 Q8NAQ8 132 aa3.86□□□□□ -1.79
VPS33B-203ENST00000554264 IGLV5-48A0A075B6I7 105 aa3.85□□□□□ -1.79
VPS33B-203ENST00000554264 A0A096LPF7 62 aa3.85□□□□□ -1.79
VPS33B-203ENST00000554264 F8WEM9 126 aa3.85□□□□□ -1.79
VPS33B-203ENST00000554264 KCNQ1DNQ9H478 68 aa3.85□□□□□ -1.79
VPS33B-203ENST00000554264 KLK12Q9UKR0 248 aa3.85□□□□□ -1.79
VPS33B-203ENST00000554264 ABCA13Q86UQ4 5058 aa3.84□□□□□ -1.79
VPS33B-203ENST00000554264 RTL8CO15255 209 aa3.84□□□□□ -1.79
VPS33B-203ENST00000554264 OXTP01178 125 aa3.84□□□□□ -1.79
VPS33B-203ENST00000554264 TLX1NBP0CAT3 122 aa3.84□□□□□ -1.79
VPS33B-203ENST00000554264 MT3P25713 68 aa3.84□□□□□ -1.79
VPS33B-203ENST00000554264 NKAPP1Q8N9T2 125 aa3.84□□□□□ -1.79
VPS33B-203ENST00000554264 Q8NDZ9 215 aa3.84□□□□□ -1.79
VPS33B-203ENST00000554264 VPS13DQ5THJ4 4388 aa3.84□□□□□ -1.8
VPS33B-203ENST00000554264 TRAV10A0A0B4J240 114 aa3.83□□□□□ -1.8
VPS33B-203ENST00000554264 A0A0U1RQV1 116 aa3.83□□□□□ -1.8
VPS33B-203ENST00000554264 NDUFB1O75438 58 aa3.83□□□□□ -1.8
VPS33B-203ENST00000554264 CDK2AP2O75956 126 aa3.83□□□□□ -1.8
VPS33B-203ENST00000554264 LINC01556Q5JQF7 62 aa3.83□□□□□ -1.8
VPS33B-203ENST00000554264 HRCT1Q6UXD1 115 aa3.83□□□□□ -1.8
VPS33B-203ENST00000554264 OCR1Q9BZK8 76 aa3.83□□□□□ -1.8
VPS33B-203ENST00000554264 DEFB4AO15263 64 aa3.82□□□□□ -1.8
VPS33B-203ENST00000554264 IGKV4-1P06312 121 aa3.82□□□□□ -1.8
VPS33B-203ENST00000554264 SYCNQ0VAF6 134 aa3.82□□□□□ -1.8
VPS33B-203ENST00000554264 C4orf26Q17RF5 130 aa3.82□□□□□ -1.8
VPS33B-203ENST00000554264 RMI2Q96E14 147 aa3.82□□□□□ -1.8
VPS33B-203ENST00000554264 RPL37AP8A6NKH3 93 aa3.81□□□□□ -1.8
VPS33B-203ENST00000554264 M0R2N4 97 aa3.81□□□□□ -1.8
VPS33B-203ENST00000554264 KRTAP10-6P60371 365 aaPredicted RBP3.81□□□□□ -1.8
VPS33B-203ENST00000554264 ESRGQ1W209 222 aa3.81□□□□□ -1.8
VPS33B-203ENST00000554264 XAGE1AQ9HD64 81 aa3.81□□□□□ -1.8
VPS33B-203ENST00000554264 V9GYY9 64 aa3.81□□□□□ -1.8
VPS33B-203ENST00000554264 DNAH11Q96DT5 4516 aa3.81□□□□□ -1.8
VPS33B-203ENST00000554264 DYNC1H1Q14204 4646 aaKnown RBP3.8□□□□□ -1.8
VPS33B-203ENST00000554264 DEFB131BA0A096LNP1 70 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 C16orf90A8MZG2 172 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 KRTAP26-1Q6PEX3 210 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 Q6ZRU5 148 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 Q6ZRX8 168 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 C15orf56Q8N910 161 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 Q8NBF4 154 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 SPRR4Q96PI1 79 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 PKIGQ9Y2B9 76 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 SNURFQ9Y675 71 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 PKHD1P08F94 4074 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 FAT2Q9NYQ8 4349 aa3.8□□□□□ -1.8
VPS33B-203ENST00000554264 ETDCA0A1B0GVM5 59 aa3.79□□□□□ -1.8
VPS33B-203ENST00000554264 H3BPC8 53 aa3.79□□□□□ -1.8
VPS33B-203ENST00000554264 HTN3P15516 51 aa3.79□□□□□ -1.8
VPS33B-203ENST00000554264 SPRR1AP35321 89 aa3.79□□□□□ -1.8
VPS33B-203ENST00000554264 C1orf134Q5TEV5 83 aa3.79□□□□□ -1.8
VPS33B-203ENST00000554264 Q6ZR54 194 aa3.79□□□□□ -1.8
VPS33B-203ENST00000554264 UBE2DNLQ8IWF7 75 aa3.79□□□□□ -1.8
VPS33B-203ENST00000554264 DNAH2Q9P225 4427 aa3.79□□□□□ -1.8
VPS33B-203ENST00000554264 DNAH6Q9C0G6 4158 aa3.78□□□□□ -1.8
VPS33B-203ENST00000554264 DNAH10OSP0CZ25 163 aa3.78□□□□□ -1.8
VPS33B-203ENST00000554264 FP248Q71RG6 208 aaPredicted RBP3.78□□□□□ -1.8
VPS33B-203ENST00000554264 C1orf137Q5JT78 98 aa3.77□□□□□ -1.81
VPS33B-203ENST00000554264 Q6ZRP5 223 aa3.77□□□□□ -1.81
VPS33B-203ENST00000554264 WFDC10BQ8IUB3 73 aa3.77□□□□□ -1.81
VPS33B-203ENST00000554264 Q8N377 158 aa3.77□□□□□ -1.81
VPS33B-203ENST00000554264 C7orf33Q8WU49 177 aa3.77□□□□□ -1.81
VPS33B-203ENST00000554264 CYP4F30PQ9H0H9 118 aa3.77□□□□□ -1.81
VPS33B-203ENST00000554264 IGLV1-50A0A075B6I6 118 aa3.76□□□□□ -1.81
VPS33B-203ENST00000554264 IGKV2D-24A0A075B6R9 120 aa3.76□□□□□ -1.81
VPS33B-203ENST00000554264 KRTAP4-16G5E9R7 235 aaPredicted RBP3.76□□□□□ -1.81
VPS33B-203ENST00000554264 MP68P56378 58 aa3.76□□□□□ -1.81
VPS33B-203ENST00000554264 Q1T7F1 81 aa3.76□□□□□ -1.81
VPS33B-203ENST00000554264 SCXQ7RTU7 201 aa3.76□□□□□ -1.81
VPS33B-203ENST00000554264 HSPG2P98160 4391 aa3.76□□□□□ -1.81
VPS33B-203ENST00000554264 IGLV8-61A0A075B6I0 122 aa3.75□□□□□ -1.81
VPS33B-203ENST00000554264 hDV103S1A0JD37 113 aa3.75□□□□□ -1.81
VPS33B-203ENST00000554264 HCG22E2RYF7 251 aa3.75□□□□□ -1.81
VPS33B-203ENST00000554264 ZCCHC13Q8WW36 166 aaKnown RBP3.75□□□□□ -1.81
VPS33B-203ENST00000554264 DNAH17Q9UFH2 4485 aa3.75□□□□□ -1.81
VPS33B-203ENST00000554264 PKD1P98161 4303 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms