RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 SCN11AQ9UI33 1791 aa-0.61□□□□□ -2.51
LINC00648-201ENST00000553747 HECTD1Q9ULT8 2610 aa-0.61□□□□□ -2.51
LINC00648-201ENST00000553747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.61□□□□□ -2.51
LINC00648-201ENST00000553747 ARFGEF2Q9Y6D5 1785 aa-0.62□□□□□ -2.51
LINC00648-201ENST00000553747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.62□□□□□ -2.51
LINC00648-201ENST00000553747 RNF213Q63HN8 5207 aa-0.62□□□□□ -2.51
LINC00648-201ENST00000553747 PVALEFA0A1B0GWK0 134 aa-0.62□□□□□ -2.51
LINC00648-201ENST00000553747 NDUFB1O75438 58 aa-0.62□□□□□ -2.51
LINC00648-201ENST00000553747 LINC00643Q86TS7 51 aa-0.62□□□□□ -2.51
LINC00648-201ENST00000553747 WFDC9Q8NEX5 89 aa-0.62□□□□□ -2.51
LINC00648-201ENST00000553747 RYR2Q92736 4967 aa-0.62□□□□□ -2.51
LINC00648-201ENST00000553747 PRRC2CQ9Y520 2896 aaKnown RBP-0.62□□□□□ -2.51
LINC00648-201ENST00000553747 NCOA2Q15596 1464 aa-0.62□□□□□ -2.51
LINC00648-201ENST00000553747 VPS13DQ5THJ4 4388 aa-0.63□□□□□ -2.51
LINC00648-201ENST00000553747 WDR87Q6ZQQ6 2873 aa-0.63□□□□□ -2.51
LINC00648-201ENST00000553747 LCE6AA0A183 80 aa-0.63□□□□□ -2.51
LINC00648-201ENST00000553747 MT1AP04731 61 aa-0.63□□□□□ -2.51
LINC00648-201ENST00000553747 Q9H521 79 aa-0.63□□□□□ -2.51
LINC00648-201ENST00000553747 CFAP43Q8NDM7 1665 aa-0.63□□□□□ -2.51
LINC00648-201ENST00000553747 USP9YO00507 2555 aaPredicted RBP-0.63□□□□□ -2.51
LINC00648-201ENST00000553747 BIRC6Q9NR09 4857 aa-0.64□□□□□ -2.51
LINC00648-201ENST00000553747 THOC2Q8NI27 1593 aaKnown RBP-0.64□□□□□ -2.51
LINC00648-201ENST00000553747 CEBPZOSA8MTT3 80 aa-0.64□□□□□ -2.51
LINC00648-201ENST00000553747 S100A16Q96FQ6 103 aaKnown RBP-0.64□□□□□ -2.51
LINC00648-201ENST00000553747 ACYP1P07311 99 aa-0.65□□□□□ -2.51
LINC00648-201ENST00000553747 C3orf79P0CE67 100 aa-0.65□□□□□ -2.51
LINC00648-201ENST00000553747 PRO3102Q9H379 93 aa-0.65□□□□□ -2.51
LINC00648-201ENST00000553747 DDX60LQ5H9U9 1706 aaKnown RBP-0.65□□□□□ -2.51
LINC00648-201ENST00000553747 ZZEF1O43149 2961 aa-0.65□□□□□ -2.51
LINC00648-201ENST00000553747 MUC17Q685J3 4493 aa-0.66□□□□□ -2.51
LINC00648-201ENST00000553747 COL6A5A8TX70 2615 aa-0.66□□□□□ -2.51
LINC00648-201ENST00000553747 C9orf92A6NGG3 77 aa-0.66□□□□□ -2.52
LINC00648-201ENST00000553747 UACAQ9BZF9 1416 aa-0.66□□□□□ -2.52
LINC00648-201ENST00000553747 PLCH1Q4KWH8 1693 aa-0.66□□□□□ -2.52
LINC00648-201ENST00000553747 RB1CC1Q8TDY2 1594 aa-0.66□□□□□ -2.52
LINC00648-201ENST00000553747 FASNP49327 2511 aaKnown RBP-0.67□□□□□ -2.52
LINC00648-201ENST00000553747 NBEAL2Q6ZNJ1 2754 aa-0.68□□□□□ -2.52
LINC00648-201ENST00000553747 NIPBLQ6KC79 2804 aaeCLIP-0.68□□□□□ -2.52
LINC00648-201ENST00000553747 MAP3K1Q13233 1512 aa-0.68□□□□□ -2.52
LINC00648-201ENST00000553747 H3BNG1 76 aa-0.68□□□□□ -2.52
LINC00648-201ENST00000553747 LINC00158P58513 81 aa-0.68□□□□□ -2.52
LINC00648-201ENST00000553747 ANKRD50Q9ULJ7 1429 aa-0.68□□□□□ -2.52
LINC00648-201ENST00000553747 LAMA1P25391 3075 aa-0.69□□□□□ -2.52
LINC00648-201ENST00000553747 H0YAA0 97 aa-0.69□□□□□ -2.52
LINC00648-201ENST00000553747 DMXL1Q9Y485 3027 aa-0.69□□□□□ -2.52
LINC00648-201ENST00000553747 ITSN1Q15811 1721 aa-0.69□□□□□ -2.52
LINC00648-201ENST00000553747 KNL1Q8NG31 2342 aa-0.7□□□□□ -2.52
LINC00648-201ENST00000553747 TACC2O95359 2948 aa-0.7□□□□□ -2.52
LINC00648-201ENST00000553747 RNF17Q9BXT8 1623 aaKnown RBP-0.7□□□□□ -2.52
LINC00648-201ENST00000553747 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.7□□□□□ -2.52
LINC00648-201ENST00000553747 LYNX1G3V0Z9 82 aa-0.7□□□□□ -2.52
LINC00648-201ENST00000553747 ATP5EP2Q5VTU8 51 aa-0.7□□□□□ -2.52
LINC00648-201ENST00000553747 MYO18BQ8IUG5 2567 aa-0.7□□□□□ -2.52
LINC00648-201ENST00000553747 ABCA13Q86UQ4 5058 aa-0.7□□□□□ -2.52
LINC00648-201ENST00000553747 ZC3H13Q5T200 1668 aaKnown RBP-0.71□□□□□ -2.52
LINC00648-201ENST00000553747 RICTORQ6R327 1708 aa-0.71□□□□□ -2.52
LINC00648-201ENST00000553747 KANTRA0A1W2PQU2 76 aa-0.71□□□□□ -2.52
LINC00648-201ENST00000553747 DNAH11Q96DT5 4516 aa-0.71□□□□□ -2.52
LINC00648-201ENST00000553747 DNHD1Q96M86 4753 aa-0.71□□□□□ -2.52
LINC00648-201ENST00000553747 KDM5DQ9BY66 1539 aa-0.71□□□□□ -2.52
LINC00648-201ENST00000553747 DCAF1Q9Y4B6 1507 aa-0.71□□□□□ -2.52
LINC00648-201ENST00000553747 ANKRD11Q6UB99 2663 aaPredicted RBP-0.71□□□□□ -2.52
LINC00648-201ENST00000553747 KALRNO60229 2985 aa-0.72□□□□□ -2.52
LINC00648-201ENST00000553747 SACSQ9NZJ4 4579 aa-0.72□□□□□ -2.52
LINC00648-201ENST00000553747 CELSR3Q9NYQ7 3312 aa-0.72□□□□□ -2.52
LINC00648-201ENST00000553747 COL12A1Q99715 3063 aa-0.72□□□□□ -2.52
LINC00648-201ENST00000553747 MED14O60244 1454 aa-0.72□□□□□ -2.52
LINC00648-201ENST00000553747 UMAD1C9J7I0 102 aa-0.72□□□□□ -2.52
LINC00648-201ENST00000553747 IFI27P40305 119 aaPredicted RBP-0.72□□□□□ -2.52
LINC00648-201ENST00000553747 CFAP74Q9C0B2 1584 aa-0.72□□□□□ -2.52
LINC00648-201ENST00000553747 PRLHP81277 87 aa-0.73□□□□□ -2.53
LINC00648-201ENST00000553747 TDRG1Q3Y452 100 aa-0.73□□□□□ -2.53
LINC00648-201ENST00000553747 NBASA2RRP1 2371 aa-0.73□□□□□ -2.53
LINC00648-201ENST00000553747 NDUFA4O00483 81 aa-0.74□□□□□ -2.53
LINC00648-201ENST00000553747 IFI6P09912 130 aa-0.74□□□□□ -2.53
LINC00648-201ENST00000553747 TRIOO75962 3097 aa-0.74□□□□□ -2.53
LINC00648-201ENST00000553747 ABCC1P33527 1531 aa-0.74□□□□□ -2.53
LINC00648-201ENST00000553747 HMGA1P17096 107 aaKnown RBP-0.75□□□□□ -2.53
LINC00648-201ENST00000553747 NREPQ16612 68 aa-0.75□□□□□ -2.53
LINC00648-201ENST00000553747 IAPPP10997 89 aa-0.76□□□□□ -2.53
LINC00648-201ENST00000553747 DEFB121Q5J5C9 76 aa-0.76□□□□□ -2.53
LINC00648-201ENST00000553747 KIAA0586Q9BVV6 1533 aa-0.76□□□□□ -2.53
LINC00648-201ENST00000553747 INO80Q9ULG1 1556 aaPredicted RBP-0.76□□□□□ -2.53
LINC00648-201ENST00000553747 NHSQ6T4R5 1651 aa-0.76□□□□□ -2.53
LINC00648-201ENST00000553747 ITSN2Q9NZM3 1697 aa-0.76□□□□□ -2.53
LINC00648-201ENST00000553747 DNAH1Q9P2D7 4330 aa-0.76□□□□□ -2.53
LINC00648-201ENST00000553747 TJP1Q07157 1748 aa-0.77□□□□□ -2.53
LINC00648-201ENST00000553747 CD163L1Q9NR16 1453 aa-0.77□□□□□ -2.53
LINC00648-201ENST00000553747 HFM1A2PYH4 1435 aa-0.77□□□□□ -2.53
LINC00648-201ENST00000553747 GCN1Q92616 2671 aaKnown RBP-0.77□□□□□ -2.53
LINC00648-201ENST00000553747 PDE4DIPQ5VU43 2346 aa-0.77□□□□□ -2.53
LINC00648-201ENST00000553747 SMARCA2P51531 1590 aa-0.78□□□□□ -2.53
LINC00648-201ENST00000553747 ERVK-7P63135 1459 aa-0.78□□□□□ -2.53
LINC00648-201ENST00000553747 DEFB131BA0A096LNP1 70 aa-0.78□□□□□ -2.53
LINC00648-201ENST00000553747 DEFB130BP0DP73 79 aa-0.78□□□□□ -2.53
LINC00648-201ENST00000553747 DEFB130AP0DP74 79 aa-0.78□□□□□ -2.53
LINC00648-201ENST00000553747 GNG2P59768 71 aa-0.78□□□□□ -2.53
LINC00648-201ENST00000553747 ST20Q9HBF5 79 aa-0.78□□□□□ -2.53
LINC00648-201ENST00000553747 ITPR2Q14571 2701 aa-0.78□□□□□ -2.53
LINC00648-201ENST00000553747 CCDC18Q5T9S5 1454 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms