RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 H0Y9J4 135 aa4.45□□□□□ -1.7
PDZRN4-204ENST00000548316 FUSP35637 526 aaKnown RBP eCLIP4.45□□□□□ -1.7
PDZRN4-204ENST00000548316 ATP5EP56381 51 aaPredicted RBP4.45□□□□□ -1.7
PDZRN4-204ENST00000548316 IGFL1Q6UW32 110 aa4.45□□□□□ -1.7
PDZRN4-204ENST00000548316 DNAH8Q96JB1 4490 aa4.44□□□□□ -1.7
PDZRN4-204ENST00000548316 LRCOL1A6NCL2 159 aa4.44□□□□□ -1.7
PDZRN4-204ENST00000548316 KRTAP13-1Q8IUC0 172 aa4.44□□□□□ -1.7
PDZRN4-204ENST00000548316 MGAM2Q2M2H8 2515 aa4.44□□□□□ -1.7
PDZRN4-204ENST00000548316 CSMD3Q7Z407 3707 aa4.44□□□□□ -1.7
PDZRN4-204ENST00000548316 Q6ZRN7 208 aaPredicted RBP4.44□□□□□ -1.7
PDZRN4-204ENST00000548316 C4orf26Q17RF5 130 aa4.44□□□□□ -1.7
PDZRN4-204ENST00000548316 FP248Q71RG6 208 aaPredicted RBP4.44□□□□□ -1.7
PDZRN4-204ENST00000548316 C5orf47Q569G3 176 aa4.43□□□□□ -1.7
PDZRN4-204ENST00000548316 HECTD4Q9Y4D8 3996 aa4.43□□□□□ -1.7
PDZRN4-204ENST00000548316 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
PDZRN4-204ENST00000548316 K7EQZ3 153 aa4.42□□□□□ -1.7
PDZRN4-204ENST00000548316 UBE2BP63146 152 aa4.42□□□□□ -1.7
PDZRN4-204ENST00000548316 A0A0G2JQZ4 141 aa4.41□□□□□ -1.7
PDZRN4-204ENST00000548316 STARD9Q9P2P6 4700 aa4.41□□□□□ -1.7
PDZRN4-204ENST00000548316 PRLHP81277 87 aa4.41□□□□□ -1.7
PDZRN4-204ENST00000548316 STAB2Q8WWQ8 2551 aa4.41□□□□□ -1.7
PDZRN4-204ENST00000548316 C9orf163Q8N9P6 203 aa4.41□□□□□ -1.7
PDZRN4-204ENST00000548316 HIGD2AQ9BW72 106 aa4.41□□□□□ -1.7
PDZRN4-204ENST00000548316 PHF5AQ7RTV0 110 aaKnown RBP4.4□□□□□ -1.7
PDZRN4-204ENST00000548316 SMIM26A0A096LP01 95 aa4.4□□□□□ -1.71
PDZRN4-204ENST00000548316 CHTF8P0CG12 524 aa4.39□□□□□ -1.71
PDZRN4-204ENST00000548316 C14orf177Q52M58 125 aa4.39□□□□□ -1.71
PDZRN4-204ENST00000548316 FAM30AQ9NZY2 134 aa4.39□□□□□ -1.71
PDZRN4-204ENST00000548316 PANO1I0J062 215 aa4.39□□□□□ -1.71
PDZRN4-204ENST00000548316 PSCAO43653 123 aa4.39□□□□□ -1.71
PDZRN4-204ENST00000548316 FAM229BQ4G0N7 80 aa4.39□□□□□ -1.71
PDZRN4-204ENST00000548316 LINC00472Q9H8W2 130 aa4.39□□□□□ -1.71
PDZRN4-204ENST00000548316 HCG22E2RYF7 251 aa4.38□□□□□ -1.71
PDZRN4-204ENST00000548316 B9D2Q9BPU9 175 aa4.38□□□□□ -1.71
PDZRN4-204ENST00000548316 HRCT1Q6UXD1 115 aa4.38□□□□□ -1.71
PDZRN4-204ENST00000548316 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.37□□□□□ -1.71
PDZRN4-204ENST00000548316 IGKV2-24A0A0C4DH68 120 aa4.37□□□□□ -1.71
PDZRN4-204ENST00000548316 TENM2Q9NT68 2774 aa4.37□□□□□ -1.71
PDZRN4-204ENST00000548316 ASB16-AS1Q495Z4 193 aa4.37□□□□□ -1.71
PDZRN4-204ENST00000548316 NBDYA0A0U1RRE5 68 aa4.36□□□□□ -1.71
PDZRN4-204ENST00000548316 CYP4F30PQ9H0H9 118 aa4.36□□□□□ -1.71
PDZRN4-204ENST00000548316 LINC00474Q9P2X8 69 aa4.36□□□□□ -1.71
PDZRN4-204ENST00000548316 DNAH11Q96DT5 4516 aa4.36□□□□□ -1.71
PDZRN4-204ENST00000548316 hDV103S1A0JD37 113 aa4.36□□□□□ -1.71
PDZRN4-204ENST00000548316 LINC00483Q53H64 154 aa4.36□□□□□ -1.71
PDZRN4-204ENST00000548316 SPACA4Q8TDM5 124 aa4.36□□□□□ -1.71
PDZRN4-204ENST00000548316 Q96NJ1 140 aa4.36□□□□□ -1.71
PDZRN4-204ENST00000548316 KRTAP3-3Q9BYR6 98 aa4.36□□□□□ -1.71
PDZRN4-204ENST00000548316 KRTAP3-2Q9BYR7 98 aa4.36□□□□□ -1.71
PDZRN4-204ENST00000548316 A0A087WSZ3 146 aa4.35□□□□□ -1.71
PDZRN4-204ENST00000548316 UBE2AP49459 152 aa4.35□□□□□ -1.71
PDZRN4-204ENST00000548316 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
PDZRN4-204ENST00000548316 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
PDZRN4-204ENST00000548316 PKIGQ9Y2B9 76 aa4.34□□□□□ -1.71
PDZRN4-204ENST00000548316 ALMS1Q8TCU4 4167 aa4.33□□□□□ -1.72
PDZRN4-204ENST00000548316 A8MWP4 228 aa4.33□□□□□ -1.72
PDZRN4-204ENST00000548316 RPL37AP61513 92 aaKnown RBP4.33□□□□□ -1.72
PDZRN4-204ENST00000548316 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.33□□□□□ -1.72
PDZRN4-204ENST00000548316 FRAS1Q86XX4 4008 aa4.33□□□□□ -1.72
PDZRN4-204ENST00000548316 FBN3Q75N90 2809 aa4.33□□□□□ -1.72
PDZRN4-204ENST00000548316 UBE2DNLQ8IWF7 75 aa4.33□□□□□ -1.72
PDZRN4-204ENST00000548316 DEFB116Q30KQ4 102 aa4.32□□□□□ -1.72
PDZRN4-204ENST00000548316 SRRM2Q9UQ35 2752 aaKnown RBP4.32□□□□□ -1.72
PDZRN4-204ENST00000548316 DNAH5Q8TE73 4624 aa4.32□□□□□ -1.72
PDZRN4-204ENST00000548316 MMP24-AS1A0A0U1RRL7 71 aa4.32□□□□□ -1.72
PDZRN4-204ENST00000548316 J3QL48 77 aa4.32□□□□□ -1.72
PDZRN4-204ENST00000548316 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
PDZRN4-204ENST00000548316 NUPR2A6NF83 97 aa4.31□□□□□ -1.72
PDZRN4-204ENST00000548316 LINC00336Q6ZUF6 198 aa4.31□□□□□ -1.72
PDZRN4-204ENST00000548316 Q6ZR54 194 aa4.31□□□□□ -1.72
PDZRN4-204ENST00000548316 MDFIQ99750 246 aa4.31□□□□□ -1.72
PDZRN4-204ENST00000548316 H3BPC8 53 aa4.3□□□□□ -1.72
PDZRN4-204ENST00000548316 C1orf64Q8NEQ6 169 aa4.3□□□□□ -1.72
PDZRN4-204ENST00000548316 A0A087WTM6 91 aa4.3□□□□□ -1.72
PDZRN4-204ENST00000548316 WFDC13Q8IUB5 93 aa4.29□□□□□ -1.72
PDZRN4-204ENST00000548316 PLAC8Q9NZF1 115 aa4.29□□□□□ -1.72
PDZRN4-204ENST00000548316 Q1T7F1 81 aa4.29□□□□□ -1.72
PDZRN4-204ENST00000548316 WWC2-AS2Q96NR7 200 aa4.29□□□□□ -1.72
PDZRN4-204ENST00000548316 KMT2AQ03164 3969 aa4.29□□□□□ -1.72
PDZRN4-204ENST00000548316 CASC2Q6XLA1 102 aa4.29□□□□□ -1.72
PDZRN4-204ENST00000548316 SPANXA2-OT1Q8N9U9 137 aa4.29□□□□□ -1.72
PDZRN4-204ENST00000548316 PKD1P98161 4303 aa4.28□□□□□ -1.72
PDZRN4-204ENST00000548316 IGLV5-52A0A0A0MRZ9 124 aa4.27□□□□□ -1.73
PDZRN4-204ENST00000548316 MOBPQ13875 183 aa4.27□□□□□ -1.73
PDZRN4-204ENST00000548316 PRO0628Q9UI54 55 aa4.26□□□□□ -1.73
PDZRN4-204ENST00000548316 H0Y9P7 68 aa4.26□□□□□ -1.73
PDZRN4-204ENST00000548316 NDUFB1O75438 58 aa4.26□□□□□ -1.73
PDZRN4-204ENST00000548316 PSORS1C2Q9UIG4 136 aa4.25□□□□□ -1.73
PDZRN4-204ENST00000548316 SACSQ9NZJ4 4579 aa4.25□□□□□ -1.73
PDZRN4-204ENST00000548316 RTL8CO15255 209 aa4.24□□□□□ -1.73
PDZRN4-204ENST00000548316 MP68P56378 58 aa4.24□□□□□ -1.73
PDZRN4-204ENST00000548316 FAT2Q9NYQ8 4349 aa4.24□□□□□ -1.73
PDZRN4-204ENST00000548316 LINC00208Q96KT6 92 aa4.24□□□□□ -1.73
PDZRN4-204ENST00000548316 KRTAP13-3Q3SY46 172 aa4.23□□□□□ -1.73
PDZRN4-204ENST00000548316 C8orf17Q9NRJ1 99 aa4.23□□□□□ -1.73
PDZRN4-204ENST00000548316 ZNF861PO60384 105 aa4.23□□□□□ -1.73
PDZRN4-204ENST00000548316 ZNF706Q9Y5V0 76 aaPredicted RBP4.23□□□□□ -1.73
PDZRN4-204ENST00000548316 A0A1B0GVX0 72 aa4.22□□□□□ -1.73
PDZRN4-204ENST00000548316 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
PDZRN4-204ENST00000548316 IGLV7-46A0A075B6I9 117 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms