RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 IGLV5-52A0A0A0MRZ9 124 aa5.89□□□□□ -1.47
GNE-206ENST00000543356 H3BQ85 93 aa5.88□□□□□ -1.47
GNE-206ENST00000543356 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.88□□□□□ -1.47
GNE-206ENST00000543356 OBSCN-AS1Q96MR7 158 aa5.88□□□□□ -1.47
GNE-206ENST00000543356 TMEM256-PLSCR3K7ERE1 68 aa5.88□□□□□ -1.47
GNE-206ENST00000543356 REG3GQ6UW15 175 aa5.88□□□□□ -1.47
GNE-206ENST00000543356 Q6ZRX8 168 aa5.88□□□□□ -1.47
GNE-206ENST00000543356 ETDCA0A1B0GVM5 59 aa5.87□□□□□ -1.47
GNE-206ENST00000543356 PANO1I0J062 215 aa5.87□□□□□ -1.47
GNE-206ENST00000543356 TRAV7A0A075B6U4 112 aa5.87□□□□□ -1.47
GNE-206ENST00000543356 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.87□□□□□ -1.47
GNE-206ENST00000543356 Q6ZQY7 126 aa5.86□□□□□ -1.47
GNE-206ENST00000543356 DHRS4-AS1Q9P1J3 65 aa5.86□□□□□ -1.47
GNE-206ENST00000543356 LCE6AA0A183 80 aa5.86□□□□□ -1.47
GNE-206ENST00000543356 PHF5AQ7RTV0 110 aaKnown RBP5.86□□□□□ -1.47
GNE-206ENST00000543356 FUSP35637 526 aaKnown RBP eCLIP5.85□□□□□ -1.47
GNE-206ENST00000543356 UBE2BP63146 152 aa5.84□□□□□ -1.47
GNE-206ENST00000543356 Q9BRP9 147 aa5.84□□□□□ -1.47
GNE-206ENST00000543356 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
GNE-206ENST00000543356 PLAC8Q9NZF1 115 aa5.83□□□□□ -1.48
GNE-206ENST00000543356 KRTAP10-2P60368 255 aa5.82□□□□□ -1.48
GNE-206ENST00000543356 KRTAP11-1Q8IUC1 163 aa5.82□□□□□ -1.48
GNE-206ENST00000543356 HYDINQ4G0P3 5121 aa5.82□□□□□ -1.48
GNE-206ENST00000543356 ATP5EP2Q5VTU8 51 aa5.82□□□□□ -1.48
GNE-206ENST00000543356 H0Y9J4 135 aa5.81□□□□□ -1.48
GNE-206ENST00000543356 RBM12B-AS1Q9P1G2 102 aa5.81□□□□□ -1.48
GNE-206ENST00000543356 DNAH11Q96DT5 4516 aa5.81□□□□□ -1.48
GNE-206ENST00000543356 A0A0A0MQY5 61 aa5.81□□□□□ -1.48
GNE-206ENST00000543356 FAT2Q9NYQ8 4349 aa5.8□□□□□ -1.48
GNE-206ENST00000543356 ATP5EP56381 51 aaPredicted RBP5.8□□□□□ -1.48
GNE-206ENST00000543356 IGLV5-48A0A075B6I7 105 aa5.79□□□□□ -1.48
GNE-206ENST00000543356 A8MU10 97 aa5.79□□□□□ -1.48
GNE-206ENST00000543356 BCE1O60756 84 aa5.79□□□□□ -1.48
GNE-206ENST00000543356 LINC01547P58512 204 aaPredicted RBP5.79□□□□□ -1.48
GNE-206ENST00000543356 LAMTOR3Q9UHA4 124 aa5.79□□□□□ -1.48
GNE-206ENST00000543356 SACSQ9NZJ4 4579 aa5.79□□□□□ -1.48
GNE-206ENST00000543356 PRLHP81277 87 aa5.79□□□□□ -1.48
GNE-206ENST00000543356 PKD1P98161 4303 aa5.78□□□□□ -1.48
GNE-206ENST00000543356 TRBV7-4A0A0J9YYF1 115 aa5.78□□□□□ -1.48
GNE-206ENST00000543356 ERC2-IT1O76042 136 aa5.78□□□□□ -1.48
GNE-206ENST00000543356 Q8N377 158 aa5.78□□□□□ -1.48
GNE-206ENST00000543356 LOC110117498A0A087WWA1 95 aa5.77□□□□□ -1.49
GNE-206ENST00000543356 NDUFC1O43677 76 aa5.77□□□□□ -1.49
GNE-206ENST00000543356 Q6ZSA8 131 aa5.77□□□□□ -1.49
GNE-206ENST00000543356 DNAH5Q8TE73 4624 aa5.77□□□□□ -1.49
GNE-206ENST00000543356 KRTAP13-1Q8IUC0 172 aa5.77□□□□□ -1.49
GNE-206ENST00000543356 UBE2AP49459 152 aa5.76□□□□□ -1.49
GNE-206ENST00000543356 ST20-AS1Q8NBB2 130 aa5.76□□□□□ -1.49
GNE-206ENST00000543356 DNAH8Q96JB1 4490 aa5.76□□□□□ -1.49
GNE-206ENST00000543356 DEFB105AQ8NG35 78 aa5.76□□□□□ -1.49
GNE-206ENST00000543356 PDE6GP18545 87 aa5.75□□□□□ -1.49
GNE-206ENST00000543356 KRTAP10-1P60331 282 aa5.75□□□□□ -1.49
GNE-206ENST00000543356 HIGD2AQ9BW72 106 aa5.75□□□□□ -1.49
GNE-206ENST00000543356 Q6ZQT0 140 aa5.75□□□□□ -1.49
GNE-206ENST00000543356 FAM30AQ9NZY2 134 aa5.74□□□□□ -1.49
GNE-206ENST00000543356 PSORS1C2Q9UIG4 136 aa5.74□□□□□ -1.49
GNE-206ENST00000543356 CIRBP-AS1Q8TBR5 109 aa5.73□□□□□ -1.49
GNE-206ENST00000543356 UBL5Q9BZL1 73 aa5.73□□□□□ -1.49
GNE-206ENST00000543356 PSPHP1O15172 72 aa5.73□□□□□ -1.49
GNE-206ENST00000543356 TMEM254Q8TBM7 123 aa5.73□□□□□ -1.49
GNE-206ENST00000543356 SPRR1BP22528 89 aa5.72□□□□□ -1.49
GNE-206ENST00000543356 SCXQ7RTU7 201 aa5.72□□□□□ -1.49
GNE-206ENST00000543356 SMIM29Q86T20 159 aa5.72□□□□□ -1.49
GNE-206ENST00000543356 A0A1B0GVY2 172 aa5.71□□□□□ -1.49
GNE-206ENST00000543356 C1orf137Q5JT78 98 aa5.71□□□□□ -1.49
GNE-206ENST00000543356 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.49
GNE-206ENST00000543356 Q1T7F1 81 aa5.71□□□□□ -1.5
GNE-206ENST00000543356 NREPQ16612 68 aa5.7□□□□□ -1.5
GNE-206ENST00000543356 RYR2Q92736 4967 aa5.7□□□□□ -1.5
GNE-206ENST00000543356 hDV103S1A0JD37 113 aa5.7□□□□□ -1.5
GNE-206ENST00000543356 HAMPP81172 84 aa5.7□□□□□ -1.5
GNE-206ENST00000543356 ZNF861PO60384 105 aa5.69□□□□□ -1.5
GNE-206ENST00000543356 C8orf87E5RJ46 101 aa5.69□□□□□ -1.5
GNE-206ENST00000543356 ZNF706Q9Y5V0 76 aaPredicted RBP5.68□□□□□ -1.5
GNE-206ENST00000543356 IGLV8-61A0A075B6I0 122 aa5.68□□□□□ -1.5
GNE-206ENST00000543356 IGLV7-43P04211 117 aa5.68□□□□□ -1.5
GNE-206ENST00000543356 Q6ZVQ6 151 aa5.68□□□□□ -1.5
GNE-206ENST00000543356 TRAV22A0A0B4J277 110 aa5.67□□□□□ -1.5
GNE-206ENST00000543356 SPRR4Q96PI1 79 aa5.67□□□□□ -1.5
GNE-206ENST00000543356 LINC00483Q53H64 154 aa5.67□□□□□ -1.5
GNE-206ENST00000543356 A0A1B0GW54 56 aa5.65□□□□□ -1.5
GNE-206ENST00000543356 A8MUN3 132 aa5.65□□□□□ -1.51
GNE-206ENST00000543356 Q8NBF4 154 aa5.64□□□□□ -1.51
GNE-206ENST00000543356 BPY2O14599 106 aa5.64□□□□□ -1.51
GNE-206ENST00000543356 C1orf64Q8NEQ6 169 aa5.64□□□□□ -1.51
GNE-206ENST00000543356 A0A1W2PNM2 257 aa5.63□□□□□ -1.51
GNE-206ENST00000543356 KMT2CQ8NEZ4 4911 aaKnown RBP5.63□□□□□ -1.51
GNE-206ENST00000543356 CXCL6P80162 114 aa5.63□□□□□ -1.51
GNE-206ENST00000543356 IGFL1Q6UW32 110 aa5.63□□□□□ -1.51
GNE-206ENST00000543356 OCR1Q9BZK8 76 aa5.62□□□□□ -1.51
GNE-206ENST00000543356 Q5VV11 94 aa5.61□□□□□ -1.51
GNE-206ENST00000543356 RPL37AP61513 92 aaKnown RBP5.61□□□□□ -1.51
GNE-206ENST00000543356 PKHD1P08F94 4074 aa5.61□□□□□ -1.51
GNE-206ENST00000543356 DYNC1H1Q14204 4646 aaKnown RBP5.6□□□□□ -1.51
GNE-206ENST00000543356 Q8N9L7 120 aa5.6□□□□□ -1.51
GNE-206ENST00000543356 LRP1BQ9NZR2 4599 aa5.6□□□□□ -1.51
GNE-206ENST00000543356 A6NN06 94 aa5.6□□□□□ -1.51
GNE-206ENST00000543356 SPTSSBQ8NFR3 76 aa5.6□□□□□ -1.51
GNE-206ENST00000543356 SRRM2Q9UQ35 2752 aaKnown RBP5.58□□□□□ -1.52
GNE-206ENST00000543356 IGLV9-49A0A0B4J1Y8 123 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms