RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 Q75L30 129 aa8.25□□□□□ -1.09
KDM3A-216ENST00000542128 LINC00476Q8WZB0 136 aa8.25□□□□□ -1.09
KDM3A-216ENST00000542128 PRAC1Q96KF2 57 aa8.25□□□□□ -1.09
KDM3A-216ENST00000542128 FAM229AH3BQW9 127 aa8.25□□□□□ -1.09
KDM3A-216ENST00000542128 TP53AIP1Q9HCN2 124 aa8.25□□□□□ -1.09
KDM3A-216ENST00000542128 CSMD1Q96PZ7 3565 aa8.24□□□□□ -1.09
KDM3A-216ENST00000542128 H3BNG1 76 aa8.23□□□□□ -1.09
KDM3A-216ENST00000542128 ACYP2P14621 99 aa8.23□□□□□ -1.09
KDM3A-216ENST00000542128 CUBNO60494 3623 aa8.22□□□□□ -1.09
KDM3A-216ENST00000542128 CIRBP-AS1Q8TBR5 109 aa8.22□□□□□ -1.09
KDM3A-216ENST00000542128 TENM4Q6N022 2769 aa8.21□□□□□ -1.09
KDM3A-216ENST00000542128 Q6ZRX8 168 aa8.21□□□□□ -1.1
KDM3A-216ENST00000542128 CELSR1Q9NYQ6 3014 aa8.21□□□□□ -1.1
KDM3A-216ENST00000542128 SPENQ96T58 3664 aaKnown RBP8.2□□□□□ -1.1
KDM3A-216ENST00000542128 CR1P17927 2039 aa8.2□□□□□ -1.1
KDM3A-216ENST00000542128 Q8N377 158 aa8.2□□□□□ -1.1
KDM3A-216ENST00000542128 C19orf73Q9NVV2 129 aa8.2□□□□□ -1.1
KDM3A-216ENST00000542128 HIVEP1P15822 2718 aa8.19□□□□□ -1.1
KDM3A-216ENST00000542128 HRNRQ86YZ3 2850 aaPredicted RBP8.19□□□□□ -1.1
KDM3A-216ENST00000542128 PRLHP81277 87 aa8.19□□□□□ -1.1
KDM3A-216ENST00000542128 A0A1W2PNM2 257 aa8.18□□□□□ -1.1
KDM3A-216ENST00000542128 LINC00313P59037 77 aa8.18□□□□□ -1.1
KDM3A-216ENST00000542128 PHF5AQ7RTV0 110 aaKnown RBP8.18□□□□□ -1.1
KDM3A-216ENST00000542128 GVQW2A0A096LPI5 108 aaPredicted RBP8.17□□□□□ -1.1
KDM3A-216ENST00000542128 NF1P21359 2839 aa8.17□□□□□ -1.1
KDM3A-216ENST00000542128 UQCR11O14957 56 aa8.17□□□□□ -1.1
KDM3A-216ENST00000542128 RTL8CO15255 209 aa8.16□□□□□ -1.1
KDM3A-216ENST00000542128 MOBPQ13875 183 aa8.15□□□□□ -1.1
KDM3A-216ENST00000542128 KCNQ1DNQ9H478 68 aa8.15□□□□□ -1.1
KDM3A-216ENST00000542128 APCP25054 2843 aa8.15□□□□□ -1.1
KDM3A-216ENST00000542128 DMBT1Q9UGM3 2413 aaPredicted RBP8.15□□□□□ -1.1
KDM3A-216ENST00000542128 IGLV8-61A0A075B6I0 122 aa8.15□□□□□ -1.1
KDM3A-216ENST00000542128 SPINK1P00995 79 aa8.15□□□□□ -1.1
KDM3A-216ENST00000542128 MIR22HGQ0VDD5 57 aa8.14□□□□□ -1.11
KDM3A-216ENST00000542128 A8MWP4 228 aa8.14□□□□□ -1.11
KDM3A-216ENST00000542128 J3QL48 77 aa8.12□□□□□ -1.11
KDM3A-216ENST00000542128 DSCR10P59022 87 aa8.12□□□□□ -1.11
KDM3A-216ENST00000542128 CSNK1G2-AS1Q8NCQ2 148 aa8.12□□□□□ -1.11
KDM3A-216ENST00000542128 FBN2P35556 2912 aa8.11□□□□□ -1.11
KDM3A-216ENST00000542128 A0A0G2JQZ4 141 aa8.11□□□□□ -1.11
KDM3A-216ENST00000542128 A0A1W2PNN7 141 aa8.11□□□□□ -1.11
KDM3A-216ENST00000542128 IGLV5-48A0A075B6I7 105 aa8.1□□□□□ -1.11
KDM3A-216ENST00000542128 A8MU10 97 aa8.09□□□□□ -1.11
KDM3A-216ENST00000542128 LINC01558Q9Y6Z2 57 aa8.09□□□□□ -1.11
KDM3A-216ENST00000542128 NBEAL2Q6ZNJ1 2754 aa8.08□□□□□ -1.12
KDM3A-216ENST00000542128 DNAH10OSP0CZ25 163 aa8.08□□□□□ -1.12
KDM3A-216ENST00000542128 IGFL1Q6UW32 110 aa8.08□□□□□ -1.12
KDM3A-216ENST00000542128 KMT2BQ9UMN6 2715 aaPredicted RBP8.08□□□□□ -1.12
KDM3A-216ENST00000542128 CSMD2Q7Z408 3487 aa8.07□□□□□ -1.12
KDM3A-216ENST00000542128 PRR26Q8N8Z3 221 aa8.07□□□□□ -1.12
KDM3A-216ENST00000542128 CHTF8P0CG12 524 aa8.07□□□□□ -1.12
KDM3A-216ENST00000542128 SPINK7P58062 85 aa8.07□□□□□ -1.12
KDM3A-216ENST00000542128 NIPBLQ6KC79 2804 aaeCLIP8.06□□□□□ -1.123e-6■■■□□ 15.5
KDM3A-216ENST00000542128 GIG44P09565 113 aaPredicted RBP8.06□□□□□ -1.12
KDM3A-216ENST00000542128 SPINT4Q6UDR6 99 aa8.06□□□□□ -1.12
KDM3A-216ENST00000542128 IGLV7-46A0A075B6I9 117 aa8.05□□□□□ -1.12
KDM3A-216ENST00000542128 Q8NDZ9 215 aa8.05□□□□□ -1.12
KDM3A-216ENST00000542128 PLA2G1BP04054 148 aaKnown RBP8.05□□□□□ -1.12
KDM3A-216ENST00000542128 LINC00612Q8N6U2 182 aa8.05□□□□□ -1.12
KDM3A-216ENST00000542128 A6NN06 94 aa8.04□□□□□ -1.12
KDM3A-216ENST00000542128 SMR3BP02814 79 aaPredicted RBP8.03□□□□□ -1.12
KDM3A-216ENST00000542128 SSBP3-AS1Q7Z2R9 100 aa8.01□□□□□ -1.13
KDM3A-216ENST00000542128 CSAG1Q6PB30 78 aa8□□□□□ -1.13
KDM3A-216ENST00000542128 SPRR4Q96PI1 79 aa7.99□□□□□ -1.13
KDM3A-216ENST00000542128 SPACA4Q8TDM5 124 aa7.99□□□□□ -1.13
KDM3A-216ENST00000542128 IGLV1-50A0A075B6I6 118 aa7.99□□□□□ -1.13
KDM3A-216ENST00000542128 FAM168BA1KXE4 195 aa7.99□□□□□ -1.13
KDM3A-216ENST00000542128 IGKV2D-30A0A075B6S6 120 aa7.98□□□□□ -1.13
KDM3A-216ENST00000542128 IGKV2-30P06310 120 aa7.98□□□□□ -1.13
KDM3A-216ENST00000542128 ZCCHC13Q8WW36 166 aaKnown RBP7.98□□□□□ -1.13
KDM3A-216ENST00000542128 MRPL34Q9BQ48 92 aaKnown RBP7.98□□□□□ -1.13
KDM3A-216ENST00000542128 APLNQ9ULZ1 77 aa7.98□□□□□ -1.13
KDM3A-216ENST00000542128 A0A087WTM6 91 aa7.97□□□□□ -1.13
KDM3A-216ENST00000542128 BSNQ9UPA5 3926 aa7.97□□□□□ -1.13
KDM3A-216ENST00000542128 PRR34Q9NV39 138 aa7.96□□□□□ -1.13
KDM3A-216ENST00000542128 MXRA5Q9NR99 2828 aa7.96□□□□□ -1.14
KDM3A-216ENST00000542128 C9orf163Q8N9P6 203 aa7.96□□□□□ -1.14
KDM3A-216ENST00000542128 CASC10Q5T4H9 136 aa7.96□□□□□ -1.14
KDM3A-216ENST00000542128 C8orf17Q9NRJ1 99 aa7.96□□□□□ -1.14
KDM3A-216ENST00000542128 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
KDM3A-216ENST00000542128 HRES1P13985 223 aa7.9□□□□□ -1.15
KDM3A-216ENST00000542128 C15orf56Q8N910 161 aa7.9□□□□□ -1.15
KDM3A-216ENST00000542128 NBPF19A0A087WUL8 3843 aa7.9□□□□□ -1.15
KDM3A-216ENST00000542128 TNP2Q05952 138 aa7.88□□□□□ -1.15
KDM3A-216ENST00000542128 CNBPP62633 177 aaKnown RBP7.87□□□□□ -1.15
KDM3A-216ENST00000542128 ZFHX3Q15911 3703 aa7.86□□□□□ -1.15
KDM3A-216ENST00000542128 A0A1B0GVX0 72 aa7.86□□□□□ -1.15
KDM3A-216ENST00000542128 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
KDM3A-216ENST00000542128 LCE6AA0A183 80 aa7.84□□□□□ -1.15
KDM3A-216ENST00000542128 FLG2Q5D862 2391 aaPredicted RBP7.81□□□□□ -1.16
KDM3A-216ENST00000542128 ASB16-AS1Q495Z4 193 aa7.81□□□□□ -1.16
KDM3A-216ENST00000542128 PLA2G2DQ9UNK4 145 aa7.8□□□□□ -1.16
KDM3A-216ENST00000542128 VPS13CQ709C8 3753 aa7.8□□□□□ -1.16
KDM3A-216ENST00000542128 MMP24-AS1A0A0U1RRL7 71 aa7.78□□□□□ -1.16
KDM3A-216ENST00000542128 TLX1NBP0CAT3 122 aa7.76□□□□□ -1.17
KDM3A-216ENST00000542128 ZNF861PO60384 105 aa7.75□□□□□ -1.17
KDM3A-216ENST00000542128 OTOGQ6ZRI0 2925 aa7.74□□□□□ -1.17
KDM3A-216ENST00000542128 PSORS1C2Q9UIG4 136 aa7.72□□□□□ -1.17
KDM3A-216ENST00000542128 KRTAP29-1A8MX34 341 aaPredicted RBP7.72□□□□□ -1.17
KDM3A-216ENST00000542128 LINC00304Q8N9R0 145 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms