RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 A0A087WTM6 91 aa9.7□□□□□ -0.86
CLPTM1-202ENST00000541297 RPL37AP8A6NKH3 93 aa9.7□□□□□ -0.86
CLPTM1-202ENST00000541297 ERC2-IT1O76042 136 aa9.7□□□□□ -0.86
CLPTM1-202ENST00000541297 ATP5EP56381 51 aaPredicted RBP9.7□□□□□ -0.86
CLPTM1-202ENST00000541297 ALMS1Q8TCU4 4167 aa9.7□□□□□ -0.86
CLPTM1-202ENST00000541297 CHTF8P0CG12 524 aa9.7□□□□□ -0.86
CLPTM1-202ENST00000541297 C1orf134Q5TEV5 83 aa9.7□□□□□ -0.86
CLPTM1-202ENST00000541297 C16orf90A8MZG2 172 aa9.69□□□□□ -0.86
CLPTM1-202ENST00000541297 PLA2G2DQ9UNK4 145 aa9.69□□□□□ -0.86
CLPTM1-202ENST00000541297 DNAH6Q9C0G6 4158 aa9.69□□□□□ -0.86
CLPTM1-202ENST00000541297 C9orf163Q8N9P6 203 aa9.69□□□□□ -0.86
CLPTM1-202ENST00000541297 MPLKIPQ8TAP9 179 aa9.68□□□□□ -0.86
CLPTM1-202ENST00000541297 FRAS1Q86XX4 4008 aa9.67□□□□□ -0.86
CLPTM1-202ENST00000541297 PRYO14603 147 aa9.67□□□□□ -0.86
CLPTM1-202ENST00000541297 FAM229BQ4G0N7 80 aa9.67□□□□□ -0.86
CLPTM1-202ENST00000541297 DNAH17Q9UFH2 4485 aa9.67□□□□□ -0.86
CLPTM1-202ENST00000541297 Q8N377 158 aa9.66□□□□□ -0.86
CLPTM1-202ENST00000541297 A0A1W2PNN7 141 aa9.66□□□□□ -0.86
CLPTM1-202ENST00000541297 MRPL55Q7Z7F7 128 aaKnown RBP9.66□□□□□ -0.86
CLPTM1-202ENST00000541297 HIGD2AQ9BW72 106 aa9.66□□□□□ -0.86
CLPTM1-202ENST00000541297 IGLV5-37A0A075B6J1 123 aa9.65□□□□□ -0.86
CLPTM1-202ENST00000541297 IGLV1-50A0A075B6I6 118 aa9.63□□□□□ -0.87
CLPTM1-202ENST00000541297 KCNQ1DNQ9H478 68 aa9.63□□□□□ -0.87
CLPTM1-202ENST00000541297 PANO1I0J062 215 aa9.62□□□□□ -0.87
CLPTM1-202ENST00000541297 IGLV5-48A0A075B6I7 105 aa9.62□□□□□ -0.87
CLPTM1-202ENST00000541297 FAM30AQ9NZY2 134 aa9.62□□□□□ -0.87
CLPTM1-202ENST00000541297 RTL8CO15255 209 aa9.61□□□□□ -0.87
CLPTM1-202ENST00000541297 TNP2Q05952 138 aa9.61□□□□□ -0.87
CLPTM1-202ENST00000541297 SMIM29Q86T20 159 aa9.61□□□□□ -0.87
CLPTM1-202ENST00000541297 A0A1W2PNM2 257 aa9.59□□□□□ -0.87
CLPTM1-202ENST00000541297 SACSQ9NZJ4 4579 aa9.58□□□□□ -0.88
CLPTM1-202ENST00000541297 PHF5AQ7RTV0 110 aaKnown RBP9.58□□□□□ -0.88
CLPTM1-202ENST00000541297 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.58□□□□□ -0.88
CLPTM1-202ENST00000541297 Q9BRP9 147 aa9.57□□□□□ -0.88
CLPTM1-202ENST00000541297 IGLV5-52A0A0A0MRZ9 124 aa9.56□□□□□ -0.88
CLPTM1-202ENST00000541297 FAT2Q9NYQ8 4349 aa9.56□□□□□ -0.88
CLPTM1-202ENST00000541297 C1orf137Q5JT78 98 aa9.55□□□□□ -0.88
CLPTM1-202ENST00000541297 Q6ZRX8 168 aa9.55□□□□□ -0.88
CLPTM1-202ENST00000541297 ST20-AS1Q8NBB2 130 aa9.55□□□□□ -0.88
CLPTM1-202ENST00000541297 DNAH11Q96DT5 4516 aa9.55□□□□□ -0.88
CLPTM1-202ENST00000541297 ETDCA0A1B0GVM5 59 aa9.55□□□□□ -0.88
CLPTM1-202ENST00000541297 KRTAP4-16G5E9R7 235 aaPredicted RBP9.55□□□□□ -0.88
CLPTM1-202ENST00000541297 REG3GQ6UW15 175 aa9.54□□□□□ -0.88
CLPTM1-202ENST00000541297 DHRS4-AS1Q9P1J3 65 aa9.54□□□□□ -0.88
CLPTM1-202ENST00000541297 SPRR1AP35321 89 aa9.54□□□□□ -0.88
CLPTM1-202ENST00000541297 KRTAP11-1Q8IUC1 163 aa9.54□□□□□ -0.88
CLPTM1-202ENST00000541297 UBE2BP63146 152 aa9.54□□□□□ -0.88
CLPTM1-202ENST00000541297 SPACA4Q8TDM5 124 aa9.54□□□□□ -0.88
CLPTM1-202ENST00000541297 DNAH5Q8TE73 4624 aa9.53□□□□□ -0.88
CLPTM1-202ENST00000541297 PKD1P98161 4303 aa9.52□□□□□ -0.88
CLPTM1-202ENST00000541297 A0A1B0GW54 56 aa9.52□□□□□ -0.89
CLPTM1-202ENST00000541297 Q8NBF4 154 aa9.52□□□□□ -0.89
CLPTM1-202ENST00000541297 DSCR10P59022 87 aa9.51□□□□□ -0.89
CLPTM1-202ENST00000541297 KRTAP10-2P60368 255 aa9.51□□□□□ -0.89
CLPTM1-202ENST00000541297 DNAH8Q96JB1 4490 aa9.51□□□□□ -0.89
CLPTM1-202ENST00000541297 LCE6AA0A183 80 aa9.51□□□□□ -0.89
CLPTM1-202ENST00000541297 K7EQZ3 153 aa9.49□□□□□ -0.89
CLPTM1-202ENST00000541297 SRRM2Q9UQ35 2752 aaKnown RBP9.49□□□□□ -0.89
CLPTM1-202ENST00000541297 PRLHP81277 87 aa9.49□□□□□ -0.89
CLPTM1-202ENST00000541297 SPRR4Q96PI1 79 aa9.49□□□□□ -0.89
CLPTM1-202ENST00000541297 hDV103S1A0JD37 113 aa9.47□□□□□ -0.89
CLPTM1-202ENST00000541297 PMAIP1Q13794 54 aa9.46□□□□□ -0.9
CLPTM1-202ENST00000541297 ZCCHC13Q8WW36 166 aaKnown RBP9.46□□□□□ -0.9
CLPTM1-202ENST00000541297 C1orf64Q8NEQ6 169 aa9.45□□□□□ -0.9
CLPTM1-202ENST00000541297 A0A0G2JQZ4 141 aa9.45□□□□□ -0.9
CLPTM1-202ENST00000541297 KMT2CQ8NEZ4 4911 aaKnown RBP9.42□□□□□ -0.9
CLPTM1-202ENST00000541297 HCG22E2RYF7 251 aa9.41□□□□□ -0.9
CLPTM1-202ENST00000541297 PRR4Q16378 134 aa9.41□□□□□ -0.9
CLPTM1-202ENST00000541297 DEFB116Q30KQ4 102 aa9.41□□□□□ -0.9
CLPTM1-202ENST00000541297 PKHD1P08F94 4074 aa9.41□□□□□ -0.9
CLPTM1-202ENST00000541297 PLAC8Q9NZF1 115 aa9.4□□□□□ -0.9
CLPTM1-202ENST00000541297 UBE2AP49459 152 aa9.39□□□□□ -0.91
CLPTM1-202ENST00000541297 Q1T7F1 81 aa9.37□□□□□ -0.91
CLPTM1-202ENST00000541297 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
CLPTM1-202ENST00000541297 IGFL1Q6UW32 110 aa9.37□□□□□ -0.91
CLPTM1-202ENST00000541297 WFDC13Q8IUB5 93 aa9.36□□□□□ -0.91
CLPTM1-202ENST00000541297 PSORS1C2Q9UIG4 136 aa9.35□□□□□ -0.91
CLPTM1-202ENST00000541297 A8MU10 97 aa9.35□□□□□ -0.91
CLPTM1-202ENST00000541297 PSPHP1O15172 72 aa9.35□□□□□ -0.91
CLPTM1-202ENST00000541297 PRR15Q8IV56 129 aa9.35□□□□□ -0.91
CLPTM1-202ENST00000541297 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
CLPTM1-202ENST00000541297 RYR2Q92736 4967 aa9.34□□□□□ -0.91
CLPTM1-202ENST00000541297 CYP4F30PQ9H0H9 118 aa9.33□□□□□ -0.92
CLPTM1-202ENST00000541297 H0Y9J4 135 aa9.33□□□□□ -0.92
CLPTM1-202ENST00000541297 A0A087WSZ3 146 aa9.32□□□□□ -0.92
CLPTM1-202ENST00000541297 RPL37AP61513 92 aaKnown RBP9.32□□□□□ -0.92
CLPTM1-202ENST00000541297 KRTAP13-1Q8IUC0 172 aa9.32□□□□□ -0.92
CLPTM1-202ENST00000541297 TRAV22A0A0B4J277 110 aa9.3□□□□□ -0.92
CLPTM1-202ENST00000541297 Q6ZSA8 131 aa9.29□□□□□ -0.92
CLPTM1-202ENST00000541297 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
CLPTM1-202ENST00000541297 MP68P56378 58 aa9.29□□□□□ -0.92
CLPTM1-202ENST00000541297 NDUFB1O75438 58 aa9.28□□□□□ -0.92
CLPTM1-202ENST00000541297 LINC00208Q96KT6 92 aa9.28□□□□□ -0.92
CLPTM1-202ENST00000541297 IGLV8-61A0A075B6I0 122 aa9.25□□□□□ -0.93
CLPTM1-202ENST00000541297 KRTAP29-1A8MX34 341 aaPredicted RBP9.25□□□□□ -0.93
CLPTM1-202ENST00000541297 A8MUN3 132 aa9.23□□□□□ -0.93
CLPTM1-202ENST00000541297 CD164Q04900 197 aa9.23□□□□□ -0.93
CLPTM1-202ENST00000541297 ZNF861PO60384 105 aa9.22□□□□□ -0.93
CLPTM1-202ENST00000541297 H0Y9P7 68 aa9.22□□□□□ -0.93
CLPTM1-202ENST00000541297 CASC2Q6XLA1 102 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms