RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 A0A087WSZ3 146 aa3.48□□□□□ -1.85
PROM1-220ENST00000540805 PRYO14603 147 aa3.48□□□□□ -1.85
PROM1-220ENST00000540805 REG3GQ6UW15 175 aa3.48□□□□□ -1.85
PROM1-220ENST00000540805 K7EIL1 84 aa3.48□□□□□ -1.85
PROM1-220ENST00000540805 MRPL55Q7Z7F7 128 aaKnown RBP3.48□□□□□ -1.85
PROM1-220ENST00000540805 SPACA4Q8TDM5 124 aa3.48□□□□□ -1.85
PROM1-220ENST00000540805 MEGF8Q7Z7M0 2845 aa3.47□□□□□ -1.85
PROM1-220ENST00000540805 IGHV6-1A0A0B4J1U7 121 aa3.47□□□□□ -1.85
PROM1-220ENST00000540805 DNAH9Q9NYC9 4486 aa3.47□□□□□ -1.85
PROM1-220ENST00000540805 A8MUN3 132 aa3.47□□□□□ -1.85
PROM1-220ENST00000540805 SMR3BP02814 79 aaPredicted RBP3.47□□□□□ -1.85
PROM1-220ENST00000540805 ELOF1P60002 83 aaKnown RBP3.47□□□□□ -1.85
PROM1-220ENST00000540805 SPTSSBQ8NFR3 76 aa3.46□□□□□ -1.86
PROM1-220ENST00000540805 Q9BRP9 147 aa3.46□□□□□ -1.86
PROM1-220ENST00000540805 LINC00588Q9Y4M8 146 aa3.46□□□□□ -1.86
PROM1-220ENST00000540805 SPINK1P00995 79 aa3.46□□□□□ -1.86
PROM1-220ENST00000540805 RYR3Q15413 4870 aa3.46□□□□□ -1.86
PROM1-220ENST00000540805 GVQW2A0A096LPI5 108 aaPredicted RBP3.45□□□□□ -1.86
PROM1-220ENST00000540805 NBDYA0A0U1RRE5 68 aa3.45□□□□□ -1.86
PROM1-220ENST00000540805 DNAH10OSP0CZ25 163 aa3.45□□□□□ -1.86
PROM1-220ENST00000540805 C1orf64Q8NEQ6 169 aa3.45□□□□□ -1.86
PROM1-220ENST00000540805 OCR1Q9BZK8 76 aa3.45□□□□□ -1.86
PROM1-220ENST00000540805 RBM12B-AS1Q9P1G2 102 aa3.45□□□□□ -1.86
PROM1-220ENST00000540805 PRR15Q8IV56 129 aa3.45□□□□□ -1.86
PROM1-220ENST00000540805 DNAH10Q8IVF4 4471 aa3.45□□□□□ -1.86
PROM1-220ENST00000540805 KRTAP10-11P60412 298 aa3.45□□□□□ -1.86
PROM1-220ENST00000540805 CD164Q04900 197 aa3.45□□□□□ -1.86
PROM1-220ENST00000540805 Q8NAQ8 132 aa3.45□□□□□ -1.86
PROM1-220ENST00000540805 C6orf48Q9UBA6 75 aa3.45□□□□□ -1.86
PROM1-220ENST00000540805 TRAV22A0A0B4J277 110 aa3.44□□□□□ -1.86
PROM1-220ENST00000540805 FAM229AH3BQW9 127 aa3.44□□□□□ -1.86
PROM1-220ENST00000540805 PHF5AQ7RTV0 110 aaKnown RBP3.44□□□□□ -1.86
PROM1-220ENST00000540805 PRKDCP78527 4128 aaKnown RBP3.44□□□□□ -1.86
PROM1-220ENST00000540805 J3QL48 77 aa3.43□□□□□ -1.86
PROM1-220ENST00000540805 VPREB1P12018 145 aa3.43□□□□□ -1.86
PROM1-220ENST00000540805 MOBPQ13875 183 aa3.43□□□□□ -1.86
PROM1-220ENST00000540805 LINC00528Q8N1L1 170 aa3.43□□□□□ -1.86
PROM1-220ENST00000540805 RTL8CO15255 209 aa3.43□□□□□ -1.86
PROM1-220ENST00000540805 LINC00208Q96KT6 92 aa3.43□□□□□ -1.86
PROM1-220ENST00000540805 PCOTHQ58A44 107 aa3.42□□□□□ -1.86
PROM1-220ENST00000540805 KMT2CQ8NEZ4 4911 aaKnown RBP3.42□□□□□ -1.86
PROM1-220ENST00000540805 hDV103S1A0JD37 113 aa3.42□□□□□ -1.86
PROM1-220ENST00000540805 PRR34Q9NV39 138 aa3.42□□□□□ -1.86
PROM1-220ENST00000540805 SMIM29Q86T20 159 aa3.42□□□□□ -1.86
PROM1-220ENST00000540805 IGKV2D-30A0A075B6S6 120 aa3.41□□□□□ -1.86
PROM1-220ENST00000540805 IGKV2-30P06310 120 aa3.41□□□□□ -1.86
PROM1-220ENST00000540805 A0A0G2JQZ4 141 aa3.4□□□□□ -1.86
PROM1-220ENST00000540805 A0A1W2PNN7 141 aa3.4□□□□□ -1.86
PROM1-220ENST00000540805 ST20-AS1Q8NBB2 130 aa3.4□□□□□ -1.86
PROM1-220ENST00000540805 BIRC6Q9NR09 4857 aa3.39□□□□□ -1.87
PROM1-220ENST00000540805 LCE6AA0A183 80 aa3.39□□□□□ -1.87
PROM1-220ENST00000540805 A0A1B0GW54 56 aa3.39□□□□□ -1.87
PROM1-220ENST00000540805 FAM168BA1KXE4 195 aa3.39□□□□□ -1.87
PROM1-220ENST00000540805 PLECQ15149 4684 aaKnown RBP3.39□□□□□ -1.87
PROM1-220ENST00000540805 IGLV5-48A0A075B6I7 105 aa3.38□□□□□ -1.87
PROM1-220ENST00000540805 PLA2G1BP04054 148 aaKnown RBP3.38□□□□□ -1.87
PROM1-220ENST00000540805 Q1T7F1 81 aa3.38□□□□□ -1.87
PROM1-220ENST00000540805 Q5VV11 94 aa3.38□□□□□ -1.87
PROM1-220ENST00000540805 Q8N377 158 aa3.38□□□□□ -1.87
PROM1-220ENST00000540805 TYMSOSQ8TAI1 123 aa3.38□□□□□ -1.87
PROM1-220ENST00000540805 TENM2Q9NT68 2774 aa3.38□□□□□ -1.87
PROM1-220ENST00000540805 LCA10Q71F78 164 aa3.38□□□□□ -1.87
PROM1-220ENST00000540805 STARD9Q9P2P6 4700 aa3.38□□□□□ -1.87
PROM1-220ENST00000540805 A0A1W2PNM2 257 aa3.37□□□□□ -1.87
PROM1-220ENST00000540805 ZCCHC13Q8WW36 166 aaKnown RBP3.37□□□□□ -1.87
PROM1-220ENST00000540805 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
PROM1-220ENST00000540805 KCNQ1DNQ9H478 68 aa3.37□□□□□ -1.87
PROM1-220ENST00000540805 ANAPC11Q9NYG5 84 aa3.37□□□□□ -1.87
PROM1-220ENST00000540805 H3BS24 57 aa3.37□□□□□ -1.87
PROM1-220ENST00000540805 C15orf56Q8N910 161 aa3.37□□□□□ -1.87
PROM1-220ENST00000540805 Q8NBF4 154 aa3.37□□□□□ -1.87
PROM1-220ENST00000540805 ADM2Q7Z4H4 148 aa3.36□□□□□ -1.87
PROM1-220ENST00000540805 CYP4F30PQ9H0H9 118 aa3.36□□□□□ -1.87
PROM1-220ENST00000540805 DNAH2Q9P225 4427 aa3.36□□□□□ -1.87
PROM1-220ENST00000540805 HCG22E2RYF7 251 aa3.36□□□□□ -1.87
PROM1-220ENST00000540805 H3BNG1 76 aa3.36□□□□□ -1.87
PROM1-220ENST00000540805 K7EQZ3 153 aa3.36□□□□□ -1.87
PROM1-220ENST00000540805 PRR15LQ9BU68 103 aa3.36□□□□□ -1.87
PROM1-220ENST00000540805 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
PROM1-220ENST00000540805 K7ERS5 55 aa3.35□□□□□ -1.87
PROM1-220ENST00000540805 DSCR10P59022 87 aa3.35□□□□□ -1.87
PROM1-220ENST00000540805 KRTAP26-1Q6PEX3 210 aa3.35□□□□□ -1.87
PROM1-220ENST00000540805 TNP2Q05952 138 aa3.35□□□□□ -1.87
PROM1-220ENST00000540805 CASC10Q5T4H9 136 aa3.35□□□□□ -1.87
PROM1-220ENST00000540805 Q6ZRX8 168 aa3.35□□□□□ -1.87
PROM1-220ENST00000540805 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
PROM1-220ENST00000540805 KRTAP17-1Q9BYP8 105 aa3.35□□□□□ -1.87
PROM1-220ENST00000540805 SERTAD4-AS1Q5TG53 156 aa3.35□□□□□ -1.87
PROM1-220ENST00000540805 SPRR4Q96PI1 79 aa3.35□□□□□ -1.87
PROM1-220ENST00000540805 KMT2AQ03164 3969 aa3.34□□□□□ -1.87
PROM1-220ENST00000540805 RPL37AP61513 92 aaKnown RBP3.34□□□□□ -1.87
PROM1-220ENST00000540805 LIMD2Q9BT23 127 aa3.34□□□□□ -1.87
PROM1-220ENST00000540805 VPS13DQ5THJ4 4388 aa3.33□□□□□ -1.88
PROM1-220ENST00000540805 A6NED7 52 aa3.33□□□□□ -1.88
PROM1-220ENST00000540805 FRAS1Q86XX4 4008 aa3.33□□□□□ -1.88
PROM1-220ENST00000540805 A0A087WTM6 91 aa3.33□□□□□ -1.88
PROM1-220ENST00000540805 C8orf87E5RJ46 101 aa3.33□□□□□ -1.88
PROM1-220ENST00000540805 COX6B2Q6YFQ2 88 aa3.33□□□□□ -1.88
PROM1-220ENST00000540805 LINC00476Q8WZB0 136 aa3.32□□□□□ -1.88
PROM1-220ENST00000540805 KRTAP4-16G5E9R7 235 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms