RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 NREPQ16612 68 aa5.67□□□□□ -1.5
DDB1-213ENST00000539332 MRPL55Q7Z7F7 128 aaKnown RBP5.67□□□□□ -1.5
DDB1-213ENST00000539332 Q6ZQY7 126 aa5.67□□□□□ -1.5
DDB1-213ENST00000539332 FP248Q71RG6 208 aaPredicted RBP5.67□□□□□ -1.5
DDB1-213ENST00000539332 TMEM254Q8TBM7 123 aa5.67□□□□□ -1.5
DDB1-213ENST00000539332 SNURFQ9Y675 71 aa5.67□□□□□ -1.5
DDB1-213ENST00000539332 DNAH17Q9UFH2 4485 aa5.66□□□□□ -1.5
DDB1-213ENST00000539332 M0R378 163 aa5.66□□□□□ -1.5
DDB1-213ENST00000539332 COX7BP24311 80 aa5.66□□□□□ -1.5
DDB1-213ENST00000539332 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
DDB1-213ENST00000539332 HECTD4Q9Y4D8 3996 aa5.65□□□□□ -1.5
DDB1-213ENST00000539332 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.65□□□□□ -1.5
DDB1-213ENST00000539332 BPY2O14599 106 aa5.65□□□□□ -1.5
DDB1-213ENST00000539332 A0A1B0GW54 56 aa5.65□□□□□ -1.51
DDB1-213ENST00000539332 KRTAP7-1Q8IUC3 87 aa5.64□□□□□ -1.51
DDB1-213ENST00000539332 FAT2Q9NYQ8 4349 aa5.63□□□□□ -1.51
DDB1-213ENST00000539332 C16orf90A8MZG2 172 aa5.63□□□□□ -1.51
DDB1-213ENST00000539332 ZNF73O43830 326 aaPredicted RBP5.63□□□□□ -1.51
DDB1-213ENST00000539332 ELOF1P60002 83 aaKnown RBP5.63□□□□□ -1.51
DDB1-213ENST00000539332 C9orf163Q8N9P6 203 aa5.63□□□□□ -1.51
DDB1-213ENST00000539332 RYR2Q92736 4967 aa5.63□□□□□ -1.51
DDB1-213ENST00000539332 A0A096LNI7 61 aa5.62□□□□□ -1.51
DDB1-213ENST00000539332 A0A0U1RQV1 116 aa5.62□□□□□ -1.51
DDB1-213ENST00000539332 FUSP35637 526 aaKnown RBP eCLIP5.62□□□□□ -1.51
DDB1-213ENST00000539332 NKAPP1Q8N9T2 125 aa5.61□□□□□ -1.51
DDB1-213ENST00000539332 C7orf33Q8WU49 177 aa5.61□□□□□ -1.51
DDB1-213ENST00000539332 KCNQ1DNQ9H478 68 aa5.61□□□□□ -1.51
DDB1-213ENST00000539332 FAM168BA1KXE4 195 aa5.6□□□□□ -1.51
DDB1-213ENST00000539332 PKD1P98161 4303 aa5.6□□□□□ -1.51
DDB1-213ENST00000539332 OCR1Q9BZK8 76 aa5.6□□□□□ -1.51
DDB1-213ENST00000539332 IGLV1-50A0A075B6I6 118 aa5.59□□□□□ -1.51
DDB1-213ENST00000539332 IGLV5-52A0A0A0MRZ9 124 aa5.59□□□□□ -1.51
DDB1-213ENST00000539332 IGKV4-1P06312 121 aa5.59□□□□□ -1.51
DDB1-213ENST00000539332 KRTAP10-2P60368 255 aa5.59□□□□□ -1.51
DDB1-213ENST00000539332 BRK1Q8WUW1 75 aa5.59□□□□□ -1.51
DDB1-213ENST00000539332 PKHD1P08F94 4074 aa5.58□□□□□ -1.52
DDB1-213ENST00000539332 KRTAP4-16G5E9R7 235 aaPredicted RBP5.58□□□□□ -1.52
DDB1-213ENST00000539332 SPRR1AP35321 89 aa5.58□□□□□ -1.52
DDB1-213ENST00000539332 DNAH11Q96DT5 4516 aa5.58□□□□□ -1.52
DDB1-213ENST00000539332 C8orf87E5RJ46 101 aa5.57□□□□□ -1.52
DDB1-213ENST00000539332 LINC00474Q9P2X8 69 aa5.57□□□□□ -1.52
DDB1-213ENST00000539332 A0A1W2PNN7 141 aa5.57□□□□□ -1.52
DDB1-213ENST00000539332 SCXQ7RTU7 201 aa5.57□□□□□ -1.52
DDB1-213ENST00000539332 IGKV2-24A0A0C4DH68 120 aa5.56□□□□□ -1.52
DDB1-213ENST00000539332 KRTAP3-3Q9BYR6 98 aa5.56□□□□□ -1.52
DDB1-213ENST00000539332 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
DDB1-213ENST00000539332 RYR3Q15413 4870 aa5.56□□□□□ -1.52
DDB1-213ENST00000539332 CHTF8P0CG12 524 aa5.55□□□□□ -1.52
DDB1-213ENST00000539332 SPACA4Q8TDM5 124 aa5.55□□□□□ -1.52
DDB1-213ENST00000539332 A0A1B0GVY2 172 aa5.54□□□□□ -1.52
DDB1-213ENST00000539332 RPL37AP8A6NKH3 93 aa5.54□□□□□ -1.52
DDB1-213ENST00000539332 PANO1I0J062 215 aa5.54□□□□□ -1.52
DDB1-213ENST00000539332 CDK2AP2O75956 126 aa5.54□□□□□ -1.52
DDB1-213ENST00000539332 IGLV5-48A0A075B6I7 105 aa5.53□□□□□ -1.52
DDB1-213ENST00000539332 Q1T7F1 81 aa5.53□□□□□ -1.52
DDB1-213ENST00000539332 Q6ZRX8 168 aa5.53□□□□□ -1.52
DDB1-213ENST00000539332 PRR15Q8IV56 129 aa5.53□□□□□ -1.52
DDB1-213ENST00000539332 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.53□□□□□ -1.52
DDB1-213ENST00000539332 DNAH5Q8TE73 4624 aa5.53□□□□□ -1.52
DDB1-213ENST00000539332 hDV103S1A0JD37 113 aa5.52□□□□□ -1.53
DDB1-213ENST00000539332 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
DDB1-213ENST00000539332 FAM229BQ4G0N7 80 aa5.52□□□□□ -1.53
DDB1-213ENST00000539332 DHRS4-AS1Q9P1J3 65 aa5.52□□□□□ -1.53
DDB1-213ENST00000539332 NDUFB1O75438 58 aa5.51□□□□□ -1.53
DDB1-213ENST00000539332 REG3GQ6UW15 175 aa5.51□□□□□ -1.53
DDB1-213ENST00000539332 Q9BRP9 147 aa5.51□□□□□ -1.53
DDB1-213ENST00000539332 HIGD2AQ9BW72 106 aa5.51□□□□□ -1.53
DDB1-213ENST00000539332 ETDCA0A1B0GVM5 59 aa5.5□□□□□ -1.53
DDB1-213ENST00000539332 KRTAP10-1P60331 282 aa5.5□□□□□ -1.53
DDB1-213ENST00000539332 DNAH8Q96JB1 4490 aa5.5□□□□□ -1.53
DDB1-213ENST00000539332 PHF5AQ7RTV0 110 aaKnown RBP5.5□□□□□ -1.53
DDB1-213ENST00000539332 KRTAP11-1Q8IUC1 163 aa5.5□□□□□ -1.53
DDB1-213ENST00000539332 Q8N9L7 120 aa5.5□□□□□ -1.53
DDB1-213ENST00000539332 CYP4F30PQ9H0H9 118 aa5.5□□□□□ -1.53
DDB1-213ENST00000539332 PLAC8Q9NZF1 115 aa5.5□□□□□ -1.53
DDB1-213ENST00000539332 ZCCHC13Q8WW36 166 aaKnown RBP5.49□□□□□ -1.53
DDB1-213ENST00000539332 H0Y9J4 135 aa5.48□□□□□ -1.53
DDB1-213ENST00000539332 Q6ZSA8 131 aa5.48□□□□□ -1.53
DDB1-213ENST00000539332 SMIM29Q86T20 159 aa5.48□□□□□ -1.53
DDB1-213ENST00000539332 RBM12B-AS1Q9P1G2 102 aa5.48□□□□□ -1.53
DDB1-213ENST00000539332 IGLV9-49A0A0B4J1Y8 123 aa5.47□□□□□ -1.53
DDB1-213ENST00000539332 Q8NBF4 154 aa5.47□□□□□ -1.53
DDB1-213ENST00000539332 KRTAP13-1Q8IUC0 172 aa5.46□□□□□ -1.54
DDB1-213ENST00000539332 Q8N377 158 aa5.46□□□□□ -1.54
DDB1-213ENST00000539332 SPRR4Q96PI1 79 aa5.46□□□□□ -1.54
DDB1-213ENST00000539332 UBE2BP63146 152 aa5.45□□□□□ -1.54
DDB1-213ENST00000539332 C1orf64Q8NEQ6 169 aa5.45□□□□□ -1.54
DDB1-213ENST00000539332 CIRBP-AS1Q8TBR5 109 aa5.45□□□□□ -1.54
DDB1-213ENST00000539332 SRRM2Q9UQ35 2752 aaKnown RBP5.45□□□□□ -1.54
DDB1-213ENST00000539332 LRP1BQ9NZR2 4599 aa5.45□□□□□ -1.54
DDB1-213ENST00000539332 NDUFS5O43920 106 aa5.44□□□□□ -1.54
DDB1-213ENST00000539332 C1orf137Q5JT78 98 aa5.44□□□□□ -1.54
DDB1-213ENST00000539332 H3BPC8 53 aa5.44□□□□□ -1.54
DDB1-213ENST00000539332 A0A1W2PNM2 257 aa5.43□□□□□ -1.54
DDB1-213ENST00000539332 MP68P56378 58 aa5.43□□□□□ -1.54
DDB1-213ENST00000539332 DYNC1H1Q14204 4646 aaKnown RBP5.43□□□□□ -1.54
DDB1-213ENST00000539332 HCG22E2RYF7 251 aa5.42□□□□□ -1.54
DDB1-213ENST00000539332 PRLHP81277 87 aa5.42□□□□□ -1.54
DDB1-213ENST00000539332 SPANXA2-OT1Q8N9U9 137 aa5.42□□□□□ -1.54
DDB1-213ENST00000539332 ST20-AS1Q8NBB2 130 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms