RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 STAB1Q9NY15 2570 aa12.32□□□□□ -0.44
SMPD1-210ENST00000534405 CMYA5Q8N3K9 4069 aa12.31□□□□□ -0.44
SMPD1-210ENST00000534405 C8orf87E5RJ46 101 aa12.31□□□□□ -0.44
SMPD1-210ENST00000534405 TNP2Q05952 138 aa12.31□□□□□ -0.44
SMPD1-210ENST00000534405 KRTAP24-1Q3LI83 254 aa12.3□□□□□ -0.44
SMPD1-210ENST00000534405 C1orf137Q5JT78 98 aa12.3□□□□□ -0.44
SMPD1-210ENST00000534405 DEFB131BA0A096LNP1 70 aa12.29□□□□□ -0.44
SMPD1-210ENST00000534405 FBN1P35555 2871 aaKnown RBP12.28□□□□□ -0.44
SMPD1-210ENST00000534405 IGKV2D-24A0A075B6R9 120 aa12.28□□□□□ -0.44
SMPD1-210ENST00000534405 LINC01556Q5JQF7 62 aa12.28□□□□□ -0.44
SMPD1-210ENST00000534405 H3BPC8 53 aa12.27□□□□□ -0.45
SMPD1-210ENST00000534405 MOBPQ13875 183 aa12.26□□□□□ -0.45
SMPD1-210ENST00000534405 FLNBO75369 2602 aaKnown RBP12.23□□□□□ -0.45
SMPD1-210ENST00000534405 MAST4O15021 2626 aa12.21□□□□□ -0.45
SMPD1-210ENST00000534405 NOTCH1P46531 2555 aa12.21□□□□□ -0.45
SMPD1-210ENST00000534405 C9orf163Q8N9P6 203 aa12.2□□□□□ -0.46
SMPD1-210ENST00000534405 DNAH3Q8TD57 4116 aa12.2□□□□□ -0.46
SMPD1-210ENST00000534405 COA5Q86WW8 74 aa12.19□□□□□ -0.46
SMPD1-210ENST00000534405 H0Y9P7 68 aa12.19□□□□□ -0.46
SMPD1-210ENST00000534405 SERTAD4-AS1Q5TG53 156 aa12.19□□□□□ -0.46
SMPD1-210ENST00000534405 WFDC13Q8IUB5 93 aa12.19□□□□□ -0.46
SMPD1-210ENST00000534405 DHRS4-AS1Q9P1J3 65 aa12.19□□□□□ -0.46
SMPD1-210ENST00000534405 DNAH10OSP0CZ25 163 aa12.18□□□□□ -0.46
SMPD1-210ENST00000534405 DEFB116Q30KQ4 102 aa12.17□□□□□ -0.46
SMPD1-210ENST00000534405 PLAC8Q9NZF1 115 aa12.17□□□□□ -0.46
SMPD1-210ENST00000534405 LINC01558Q9Y6Z2 57 aa12.16□□□□□ -0.46
SMPD1-210ENST00000534405 KRTAP29-1A8MX34 341 aaPredicted RBP12.16□□□□□ -0.46
SMPD1-210ENST00000534405 CASC10Q5T4H9 136 aa12.16□□□□□ -0.46
SMPD1-210ENST00000534405 C7orf33Q8WU49 177 aa12.15□□□□□ -0.46
SMPD1-210ENST00000534405 NKAPP1Q8N9T2 125 aa12.14□□□□□ -0.47
SMPD1-210ENST00000534405 Q6ZRX8 168 aa12.12□□□□□ -0.47
SMPD1-210ENST00000534405 IGLV7-46A0A075B6I9 117 aa12.11□□□□□ -0.47
SMPD1-210ENST00000534405 FAM168BA1KXE4 195 aa12.1□□□□□ -0.47
SMPD1-210ENST00000534405 DNAH1Q9P2D7 4330 aa12.09□□□□□ -0.47
SMPD1-210ENST00000534405 KRTAP4-16G5E9R7 235 aaPredicted RBP12.08□□□□□ -0.48
SMPD1-210ENST00000534405 TLX1NBP0CAT3 122 aa12.07□□□□□ -0.48
SMPD1-210ENST00000534405 RPL37AP8A6NKH3 93 aa12.07□□□□□ -0.48
SMPD1-210ENST00000534405 H3BS24 57 aa12.07□□□□□ -0.48
SMPD1-210ENST00000534405 NBEAL1Q6ZS30 2694 aa12.06□□□□□ -0.48
SMPD1-210ENST00000534405 KRTAP7-1Q8IUC3 87 aa12.06□□□□□ -0.48
SMPD1-210ENST00000534405 SPINK7P58062 85 aa12.05□□□□□ -0.48
SMPD1-210ENST00000534405 HUWE1Q7Z6Z7 4374 aaKnown RBP12.04□□□□□ -0.48
SMPD1-210ENST00000534405 CNBPP62633 177 aaKnown RBP12.04□□□□□ -0.48
SMPD1-210ENST00000534405 LINC00313P59037 77 aa12.03□□□□□ -0.48
SMPD1-210ENST00000534405 CASC2Q6XLA1 102 aa12.03□□□□□ -0.48
SMPD1-210ENST00000534405 PLA2G2DQ9UNK4 145 aa12.03□□□□□ -0.48
SMPD1-210ENST00000534405 COL6A5A8TX70 2615 aa12.03□□□□□ -0.48
SMPD1-210ENST00000534405 BAHCC1Q9P281 2608 aa12.02□□□□□ -0.49
SMPD1-210ENST00000534405 SPAG11AQ6PDA7 123 aa12.02□□□□□ -0.49
SMPD1-210ENST00000534405 LINC00476Q8WZB0 136 aa12.02□□□□□ -0.49
SMPD1-210ENST00000534405 SPRR1AP35321 89 aa12.01□□□□□ -0.49
SMPD1-210ENST00000534405 IGLV1-50A0A075B6I6 118 aa12.01□□□□□ -0.49
SMPD1-210ENST00000534405 IGLV5-37A0A075B6J1 123 aa11.99□□□□□ -0.49
SMPD1-210ENST00000534405 K7EIL1 84 aa11.99□□□□□ -0.49
SMPD1-210ENST00000534405 RPL37AP61513 92 aaKnown RBP11.98□□□□□ -0.49
SMPD1-210ENST00000534405 IGFL1Q6UW32 110 aa11.97□□□□□ -0.49
SMPD1-210ENST00000534405 LINC01554Q52M75 96 aa11.96□□□□□ -0.5
SMPD1-210ENST00000534405 PRAC1Q96KF2 57 aa11.96□□□□□ -0.5
SMPD1-210ENST00000534405 A0A087WSZ3 146 aa11.94□□□□□ -0.5
SMPD1-210ENST00000534405 A0A0G2JQZ4 141 aa11.93□□□□□ -0.5
SMPD1-210ENST00000534405 A0A1W2PNN7 141 aa11.93□□□□□ -0.5
SMPD1-210ENST00000534405 LYSTQ99698 3801 aa11.92□□□□□ -0.5
SMPD1-210ENST00000534405 PLA2G1BP04054 148 aaKnown RBP11.91□□□□□ -0.5
SMPD1-210ENST00000534405 KRTAP1-5Q9BYS1 174 aa11.9□□□□□ -0.5
SMPD1-210ENST00000534405 DNAH10Q8IVF4 4471 aa11.9□□□□□ -0.5
SMPD1-210ENST00000534405 MGAM2Q2M2H8 2515 aa11.88□□□□□ -0.51
SMPD1-210ENST00000534405 IGLV8-61A0A075B6I0 122 aa11.88□□□□□ -0.51
SMPD1-210ENST00000534405 A8MWP4 228 aa11.88□□□□□ -0.51
SMPD1-210ENST00000534405 ASB16-AS1Q495Z4 193 aa11.87□□□□□ -0.51
SMPD1-210ENST00000534405 PCOTHQ58A44 107 aa11.86□□□□□ -0.51
SMPD1-210ENST00000534405 STAB2Q8WWQ8 2551 aa11.86□□□□□ -0.51
SMPD1-210ENST00000534405 ADM2Q7Z4H4 148 aa11.84□□□□□ -0.51
SMPD1-210ENST00000534405 REG3GQ6UW15 175 aa11.84□□□□□ -0.51
SMPD1-210ENST00000534405 A0A096LNI7 61 aa11.83□□□□□ -0.52
SMPD1-210ENST00000534405 HRES1P13985 223 aa11.83□□□□□ -0.52
SMPD1-210ENST00000534405 DNAH9Q9NYC9 4486 aa11.82□□□□□ -0.52
SMPD1-210ENST00000534405 COL7A1Q02388 2944 aa11.82□□□□□ -0.52
SMPD1-210ENST00000534405 IGKV2-24A0A0C4DH68 120 aa11.81□□□□□ -0.52
SMPD1-210ENST00000534405 MDFIQ99750 246 aa11.8□□□□□ -0.52
SMPD1-210ENST00000534405 LINC00472Q9H8W2 130 aa11.8□□□□□ -0.52
SMPD1-210ENST00000534405 A0A087X002 238 aa11.79□□□□□ -0.52
SMPD1-210ENST00000534405 MMP24-AS1A0A0U1RRL7 71 aa11.79□□□□□ -0.52
SMPD1-210ENST00000534405 PRLHP81277 87 aa11.77□□□□□ -0.53
SMPD1-210ENST00000534405 PRR26Q8N8Z3 221 aa11.76□□□□□ -0.53
SMPD1-210ENST00000534405 TP53AIP1Q9HCN2 124 aa11.75□□□□□ -0.53
SMPD1-210ENST00000534405 Q6ZR54 194 aa11.74□□□□□ -0.53
SMPD1-210ENST00000534405 RTL8CO15255 209 aa11.72□□□□□ -0.53
SMPD1-210ENST00000534405 KRTAP11-1Q8IUC1 163 aa11.72□□□□□ -0.53
SMPD1-210ENST00000534405 APLNQ9ULZ1 77 aa11.72□□□□□ -0.53
SMPD1-210ENST00000534405 CHTF8P0CG12 524 aa11.71□□□□□ -0.53
SMPD1-210ENST00000534405 UBE2DNLQ8IWF7 75 aa11.7□□□□□ -0.54
SMPD1-210ENST00000534405 DNAH7Q8WXX0 4024 aa11.7□□□□□ -0.54
SMPD1-210ENST00000534405 CSMD3Q7Z407 3707 aa11.69□□□□□ -0.54
SMPD1-210ENST00000534405 TENM2Q9NT68 2774 aa11.68□□□□□ -0.54
SMPD1-210ENST00000534405 H0Y9J4 135 aa11.68□□□□□ -0.54
SMPD1-210ENST00000534405 SRRM2Q9UQ35 2752 aaKnown RBP11.64□□□□□ -0.55
SMPD1-210ENST00000534405 DYNC2H1Q8NCM8 4307 aaKnown RBP11.63□□□□□ -0.55
SMPD1-210ENST00000534405 PLECQ15149 4684 aaKnown RBP11.6□□□□□ -0.55
SMPD1-210ENST00000534405 SPATA8Q6RVD6 105 aa11.6□□□□□ -0.55
SMPD1-210ENST00000534405 C14orf177Q52M58 125 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms