RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SNCGO76070 127 aa7.14□□□□□ -1.27
CAPN1-223ENST00000533079 ASB16-AS1Q495Z4 193 aa7.14□□□□□ -1.27
CAPN1-223ENST00000533079 KRTAP13-1Q8IUC0 172 aa7.14□□□□□ -1.27
CAPN1-223ENST00000533079 TRBV10-3A0A0K0K1G6 114 aa7.13□□□□□ -1.27
CAPN1-223ENST00000533079 OCIAD2Q56VL3 154 aa7.13□□□□□ -1.27
CAPN1-223ENST00000533079 TEN1Q86WV5 123 aa7.13□□□□□ -1.27
CAPN1-223ENST00000533079 FAM218AQ96MZ4 157 aa7.13□□□□□ -1.27
CAPN1-223ENST00000533079 LINC00167Q96N53 147 aa7.13□□□□□ -1.27
CAPN1-223ENST00000533079 ANAPC11Q9NYG5 84 aa7.13□□□□□ -1.27
CAPN1-223ENST00000533079 K7ERU9 68 aa7.12□□□□□ -1.27
CAPN1-223ENST00000533079 UBE2AP49459 152 aa7.12□□□□□ -1.27
CAPN1-223ENST00000533079 ETDBQ3ZM63 59 aa7.12□□□□□ -1.27
CAPN1-223ENST00000533079 C6orf99Q4VX62 202 aa7.12□□□□□ -1.27
CAPN1-223ENST00000533079 KCNQ1DNQ9H478 68 aa7.12□□□□□ -1.27
CAPN1-223ENST00000533079 TRAV23DV6A0A075B6W5 121 aa7.11□□□□□ -1.27
CAPN1-223ENST00000533079 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
CAPN1-223ENST00000533079 LINC00575Q6W349 94 aa7.11□□□□□ -1.27
CAPN1-223ENST00000533079 NKAPP1Q8N9T2 125 aa7.11□□□□□ -1.27
CAPN1-223ENST00000533079 H3BQ85 93 aa7.1□□□□□ -1.27
CAPN1-223ENST00000533079 J3QR89 54 aa7.1□□□□□ -1.27
CAPN1-223ENST00000533079 ZNF73O43830 326 aaPredicted RBP7.1□□□□□ -1.27
CAPN1-223ENST00000533079 RPL37AP8A6NKH3 93 aa7.09□□□□□ -1.27
CAPN1-223ENST00000533079 BAALC-AS2P0C853 105 aa7.09□□□□□ -1.27
CAPN1-223ENST00000533079 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
CAPN1-223ENST00000533079 MTURNQ8N3F0 131 aa7.09□□□□□ -1.27
CAPN1-223ENST00000533079 PPDPFLQ8WWR9 84 aa7.09□□□□□ -1.27
CAPN1-223ENST00000533079 DNAL4O96015 105 aa7.08□□□□□ -1.28
CAPN1-223ENST00000533079 KRTAP13-3Q3SY46 172 aa7.08□□□□□ -1.28
CAPN1-223ENST00000533079 PRYO14603 147 aa7.07□□□□□ -1.28
CAPN1-223ENST00000533079 GHRHP01286 108 aa7.07□□□□□ -1.28
CAPN1-223ENST00000533079 COX7BP24311 80 aa7.07□□□□□ -1.28
CAPN1-223ENST00000533079 SPRR1AP35321 89 aa7.07□□□□□ -1.28
CAPN1-223ENST00000533079 ELOF1P60002 83 aaKnown RBP7.07□□□□□ -1.28
CAPN1-223ENST00000533079 hADV29S1A0JD25 119 aa7.06□□□□□ -1.28
CAPN1-223ENST00000533079 ORMDL1Q9P0S3 153 aa7.05□□□□□ -1.28
CAPN1-223ENST00000533079 KRTAP4-16G5E9R7 235 aaPredicted RBP7.04□□□□□ -1.28
CAPN1-223ENST00000533079 TMEM256-PLSCR3K7ERE1 68 aa7.04□□□□□ -1.28
CAPN1-223ENST00000533079 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.04□□□□□ -1.28
CAPN1-223ENST00000533079 OBSCN-AS1Q96MR7 158 aa7.03□□□□□ -1.28
CAPN1-223ENST00000533079 KRTAP4-1Q9BYQ7 146 aa7.03□□□□□ -1.28
CAPN1-223ENST00000533079 PRLHP81277 87 aa7.02□□□□□ -1.29
CAPN1-223ENST00000533079 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
CAPN1-223ENST00000533079 C3orf22Q8N5N4 141 aa7.02□□□□□ -1.29
CAPN1-223ENST00000533079 TEX49A0A1B0GTD5 131 aa7.01□□□□□ -1.29
CAPN1-223ENST00000533079 DHRS4-AS1Q9P1J3 65 aa7.01□□□□□ -1.29
CAPN1-223ENST00000533079 B5MCH6 92 aa7□□□□□ -1.29
CAPN1-223ENST00000533079 FAM19A1Q7Z5A9 133 aa7□□□□□ -1.29
CAPN1-223ENST00000533079 JMJD7-PLA2G4BH0Y9G9 81 aa6.99□□□□□ -1.29
CAPN1-223ENST00000533079 Q6ZRX8 168 aa6.99□□□□□ -1.29
CAPN1-223ENST00000533079 FAM240AA0A1B0GVK7 77 aa6.98□□□□□ -1.29
CAPN1-223ENST00000533079 SPINK1P00995 79 aa6.98□□□□□ -1.29
CAPN1-223ENST00000533079 ZNF706Q9Y5V0 76 aaPredicted RBP6.98□□□□□ -1.29
CAPN1-223ENST00000533079 ETDCA0A1B0GVM5 59 aa6.97□□□□□ -1.29
CAPN1-223ENST00000533079 ACYP1P07311 99 aa6.97□□□□□ -1.29
CAPN1-223ENST00000533079 LCE2CQ5TA81 110 aa6.97□□□□□ -1.29
CAPN1-223ENST00000533079 Q6ZQY7 126 aa6.97□□□□□ -1.29
CAPN1-223ENST00000533079 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
CAPN1-223ENST00000533079 C21orf62-AS1Q17RA5 79 aa6.95□□□□□ -1.3
CAPN1-223ENST00000533079 XP32Q5T750 250 aa6.95□□□□□ -1.3
CAPN1-223ENST00000533079 SPRR4Q96PI1 79 aa6.95□□□□□ -1.3
CAPN1-223ENST00000533079 MT1HP80294 61 aa6.94□□□□□ -1.3
CAPN1-223ENST00000533079 Q8NBF4 154 aa6.94□□□□□ -1.3
CAPN1-223ENST00000533079 Q9BRP9 147 aa6.94□□□□□ -1.3
CAPN1-223ENST00000533079 HIGD2AQ9BW72 106 aa6.94□□□□□ -1.3
CAPN1-223ENST00000533079 PDE6GP18545 87 aa6.93□□□□□ -1.3
CAPN1-223ENST00000533079 IGLV5-48A0A075B6I7 105 aa6.92□□□□□ -1.3
CAPN1-223ENST00000533079 VPS25Q9BRG1 176 aa6.92□□□□□ -1.3
CAPN1-223ENST00000533079 LOC110117498A0A087WWA1 95 aa6.91□□□□□ -1.3
CAPN1-223ENST00000533079 RBM3P98179 157 aaKnown RBP6.91□□□□□ -1.3
CAPN1-223ENST00000533079 KRTAP19-2Q3LHN2 52 aa6.91□□□□□ -1.3
CAPN1-223ENST00000533079 CCKP06307 115 aa6.9□□□□□ -1.3
CAPN1-223ENST00000533079 LORP23490 312 aaPredicted RBP6.9□□□□□ -1.3
CAPN1-223ENST00000533079 NDUFV3P56181 108 aaKnown RBP6.9□□□□□ -1.3
CAPN1-223ENST00000533079 Q8N377 158 aa6.89□□□□□ -1.31
CAPN1-223ENST00000533079 SMCR5Q8TEV8 140 aa6.89□□□□□ -1.31
CAPN1-223ENST00000533079 LAMTOR3Q9UHA4 124 aa6.89□□□□□ -1.31
CAPN1-223ENST00000533079 C14orf132Q9NPU4 83 aa6.88□□□□□ -1.31
CAPN1-223ENST00000533079 KRTAP10-6P60371 365 aaPredicted RBP6.87□□□□□ -1.31
CAPN1-223ENST00000533079 DSCR8Q96T75 97 aa6.87□□□□□ -1.31
CAPN1-223ENST00000533079 TRBV7-4A0A0J9YYF1 115 aa6.86□□□□□ -1.31
CAPN1-223ENST00000533079 ERC2-IT1O76042 136 aa6.86□□□□□ -1.31
CAPN1-223ENST00000533079 SPRR1BP22528 89 aa6.86□□□□□ -1.31
CAPN1-223ENST00000533079 LINC00483Q53H64 154 aa6.86□□□□□ -1.31
CAPN1-223ENST00000533079 SIGMAR1Q99720 223 aa6.86□□□□□ -1.31
CAPN1-223ENST00000533079 A0A1B0GW54 56 aa6.85□□□□□ -1.31
CAPN1-223ENST00000533079 Q6ZQT0 140 aa6.85□□□□□ -1.31
CAPN1-223ENST00000533079 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
CAPN1-223ENST00000533079 GAGE2AQ6NT46 116 aa6.84□□□□□ -1.31
CAPN1-223ENST00000533079 SSBP3-AS1Q7Z2R9 100 aa6.83□□□□□ -1.32
CAPN1-223ENST00000533079 ST20-AS1Q8NBB2 130 aa6.83□□□□□ -1.32
CAPN1-223ENST00000533079 SMIM29Q86T20 159 aa6.82□□□□□ -1.32
CAPN1-223ENST00000533079 LINC00643Q86TS7 51 aa6.82□□□□□ -1.32
CAPN1-223ENST00000533079 DEFB105AQ8NG35 78 aa6.82□□□□□ -1.32
CAPN1-223ENST00000533079 IGLV8-61A0A075B6I0 122 aa6.81□□□□□ -1.32
CAPN1-223ENST00000533079 MOBPQ13875 183 aa6.81□□□□□ -1.32
CAPN1-223ENST00000533079 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
CAPN1-223ENST00000533079 IGLV9-49A0A0B4J1Y8 123 aa6.78□□□□□ -1.32
CAPN1-223ENST00000533079 M0R2T5 61 aa6.78□□□□□ -1.32
CAPN1-223ENST00000533079 SCGB1A1P11684 91 aa6.78□□□□□ -1.32
CAPN1-223ENST00000533079 PCOTHQ58A44 107 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms