RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 F8WEM9 126 aa10.95□□□□□ -0.66
USH1C-205ENST00000527020 PRKDCP78527 4128 aaKnown RBP10.95□□□□□ -0.66
USH1C-205ENST00000527020 IGLV8-61A0A075B6I0 122 aa10.94□□□□□ -0.66
USH1C-205ENST00000527020 OCR1Q9BZK8 76 aa10.94□□□□□ -0.66
USH1C-205ENST00000527020 PANO1I0J062 215 aa10.94□□□□□ -0.66
USH1C-205ENST00000527020 EPM2AB3EWF7 344 aa10.93□□□□□ -0.66
USH1C-205ENST00000527020 OXTP01178 125 aa10.93□□□□□ -0.66
USH1C-205ENST00000527020 DSCR10P59022 87 aa10.93□□□□□ -0.66
USH1C-205ENST00000527020 H0Y9J4 135 aa10.92□□□□□ -0.66
USH1C-205ENST00000527020 SPRR1BP22528 89 aa10.89□□□□□ -0.67
USH1C-205ENST00000527020 FAM236DA0A1B0GTK5 79 aa10.88□□□□□ -0.67
USH1C-205ENST00000527020 K7EQZ3 153 aa10.88□□□□□ -0.67
USH1C-205ENST00000527020 FAM236CP0DP71 79 aa10.88□□□□□ -0.67
USH1C-205ENST00000527020 UBE2AP49459 152 aa10.88□□□□□ -0.67
USH1C-205ENST00000527020 TMEM254Q8TBM7 123 aa10.88□□□□□ -0.67
USH1C-205ENST00000527020 LINC00474Q9P2X8 69 aa10.87□□□□□ -0.67
USH1C-205ENST00000527020 PKIGQ9Y2B9 76 aa10.87□□□□□ -0.67
USH1C-205ENST00000527020 HECTD4Q9Y4D8 3996 aa10.86□□□□□ -0.67
USH1C-205ENST00000527020 KRTAP13-1Q8IUC0 172 aa10.84□□□□□ -0.67
USH1C-205ENST00000527020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.84□□□□□ -0.67
USH1C-205ENST00000527020 A0A087WSZ3 146 aa10.84□□□□□ -0.67
USH1C-205ENST00000527020 A0A0U1RQV1 116 aa10.83□□□□□ -0.68
USH1C-205ENST00000527020 SPACA4Q8TDM5 124 aa10.83□□□□□ -0.68
USH1C-205ENST00000527020 MEGF8Q7Z7M0 2845 aa10.82□□□□□ -0.68
USH1C-205ENST00000527020 NDUFC1O43677 76 aa10.82□□□□□ -0.68
USH1C-205ENST00000527020 DEFB116Q30KQ4 102 aa10.82□□□□□ -0.68
USH1C-205ENST00000527020 FAM30AQ9NZY2 134 aa10.82□□□□□ -0.68
USH1C-205ENST00000527020 DNAH2Q9P225 4427 aa10.81□□□□□ -0.68
USH1C-205ENST00000527020 DNAH17Q9UFH2 4485 aa10.8□□□□□ -0.68
USH1C-205ENST00000527020 KMT2AQ03164 3969 aa10.8□□□□□ -0.68
USH1C-205ENST00000527020 A0A087WTM6 91 aa10.8□□□□□ -0.68
USH1C-205ENST00000527020 KRTAP21-3Q3LHN1 58 aa10.8□□□□□ -0.68
USH1C-205ENST00000527020 LCE6AA0A183 80 aa10.78□□□□□ -0.68
USH1C-205ENST00000527020 HCG22E2RYF7 251 aa10.76□□□□□ -0.69
USH1C-205ENST00000527020 FBN3Q75N90 2809 aa10.75□□□□□ -0.69
USH1C-205ENST00000527020 SERP1Q9Y6X1 66 aa10.75□□□□□ -0.69
USH1C-205ENST00000527020 Q6ZR54 194 aa10.75□□□□□ -0.69
USH1C-205ENST00000527020 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
USH1C-205ENST00000527020 DNAH8Q96JB1 4490 aa10.72□□□□□ -0.69
USH1C-205ENST00000527020 RTL8CO15255 209 aa10.72□□□□□ -0.69
USH1C-205ENST00000527020 DNHD1Q96M86 4753 aa10.72□□□□□ -0.69
USH1C-205ENST00000527020 LINC00472Q9H8W2 130 aa10.7□□□□□ -0.7
USH1C-205ENST00000527020 Q5XG85 94 aa10.7□□□□□ -0.7
USH1C-205ENST00000527020 ATP5EP56381 51 aaPredicted RBP10.69□□□□□ -0.7
USH1C-205ENST00000527020 WFDC13Q8IUB5 93 aa10.67□□□□□ -0.7
USH1C-205ENST00000527020 KRTAP29-1A8MX34 341 aaPredicted RBP10.67□□□□□ -0.7
USH1C-205ENST00000527020 ZCCHC13Q8WW36 166 aaKnown RBP10.67□□□□□ -0.7
USH1C-205ENST00000527020 LINC00483Q53H64 154 aa10.66□□□□□ -0.7
USH1C-205ENST00000527020 FRAS1Q86XX4 4008 aa10.66□□□□□ -0.7
USH1C-205ENST00000527020 TGP01266 2768 aa10.66□□□□□ -0.7
USH1C-205ENST00000527020 PSORS1C2Q9UIG4 136 aa10.65□□□□□ -0.7
USH1C-205ENST00000527020 PRR15Q8IV56 129 aa10.65□□□□□ -0.71
USH1C-205ENST00000527020 PLAC8Q9NZF1 115 aa10.65□□□□□ -0.71
USH1C-205ENST00000527020 IGLV5-52A0A0A0MRZ9 124 aa10.64□□□□□ -0.71
USH1C-205ENST00000527020 IGLV9-49A0A0B4J1Y8 123 aa10.63□□□□□ -0.71
USH1C-205ENST00000527020 A8MWP4 228 aa10.63□□□□□ -0.71
USH1C-205ENST00000527020 C5orf47Q569G3 176 aa10.63□□□□□ -0.71
USH1C-205ENST00000527020 C4orf26Q17RF5 130 aa10.62□□□□□ -0.71
USH1C-205ENST00000527020 C1orf134Q5TEV5 83 aa10.59□□□□□ -0.71
USH1C-205ENST00000527020 CASC2Q6XLA1 102 aa10.59□□□□□ -0.71
USH1C-205ENST00000527020 Q96NJ1 140 aa10.59□□□□□ -0.71
USH1C-205ENST00000527020 WWC2-AS2Q96NR7 200 aa10.59□□□□□ -0.71
USH1C-205ENST00000527020 DNAH6Q9C0G6 4158 aa10.59□□□□□ -0.71
USH1C-205ENST00000527020 FP248Q71RG6 208 aaPredicted RBP10.56□□□□□ -0.72
USH1C-205ENST00000527020 ZNF706Q9Y5V0 76 aaPredicted RBP10.56□□□□□ -0.72
USH1C-205ENST00000527020 ZNF861PO60384 105 aa10.56□□□□□ -0.72
USH1C-205ENST00000527020 ANAPC11Q9NYG5 84 aa10.55□□□□□ -0.72
USH1C-205ENST00000527020 SMIM26A0A096LP01 95 aa10.55□□□□□ -0.72
USH1C-205ENST00000527020 MOBPQ13875 183 aa10.55□□□□□ -0.72
USH1C-205ENST00000527020 MMP24-AS1A0A0U1RRL7 71 aa10.53□□□□□ -0.72
USH1C-205ENST00000527020 HRCT1Q6UXD1 115 aa10.53□□□□□ -0.72
USH1C-205ENST00000527020 FAM229BQ4G0N7 80 aa10.53□□□□□ -0.72
USH1C-205ENST00000527020 DNAH11Q96DT5 4516 aa10.53□□□□□ -0.72
USH1C-205ENST00000527020 DNAH5Q8TE73 4624 aa10.52□□□□□ -0.72
USH1C-205ENST00000527020 LY6G6CO95867 125 aa10.52□□□□□ -0.73
USH1C-205ENST00000527020 ALMS1Q8TCU4 4167 aa10.49□□□□□ -0.73
USH1C-205ENST00000527020 MP68P56378 58 aa10.49□□□□□ -0.73
USH1C-205ENST00000527020 LINC00208Q96KT6 92 aa10.47□□□□□ -0.73
USH1C-205ENST00000527020 H0Y9P7 68 aa10.46□□□□□ -0.73
USH1C-205ENST00000527020 NDUFB1O75438 58 aa10.46□□□□□ -0.73
USH1C-205ENST00000527020 IGLV7-43P04211 117 aa10.46□□□□□ -0.73
USH1C-205ENST00000527020 ASB16-AS1Q495Z4 193 aa10.46□□□□□ -0.73
USH1C-205ENST00000527020 TRAV22A0A0B4J277 110 aa10.46□□□□□ -0.74
USH1C-205ENST00000527020 hDV103S1A0JD37 113 aa10.45□□□□□ -0.74
USH1C-205ENST00000527020 KRTAP10-2P60368 255 aa10.45□□□□□ -0.74
USH1C-205ENST00000527020 PKD1P98161 4303 aa10.43□□□□□ -0.74
USH1C-205ENST00000527020 C1orf64Q8NEQ6 169 aa10.42□□□□□ -0.74
USH1C-205ENST00000527020 CYP4F30PQ9H0H9 118 aa10.42□□□□□ -0.74
USH1C-205ENST00000527020 H3BPC8 53 aa10.41□□□□□ -0.74
USH1C-205ENST00000527020 C8orf17Q9NRJ1 99 aa10.41□□□□□ -0.74
USH1C-205ENST00000527020 PRR4Q16378 134 aa10.41□□□□□ -0.74
USH1C-205ENST00000527020 CIRBP-AS1Q8TBR5 109 aa10.41□□□□□ -0.74
USH1C-205ENST00000527020 A0A1B0GVX0 72 aa10.39□□□□□ -0.75
USH1C-205ENST00000527020 HYDINQ4G0P3 5121 aa10.38□□□□□ -0.75
USH1C-205ENST00000527020 FAT2Q9NYQ8 4349 aa10.37□□□□□ -0.75
USH1C-205ENST00000527020 IGHV6-1A0A0B4J1U7 121 aa10.37□□□□□ -0.75
USH1C-205ENST00000527020 A0A087X002 238 aa10.35□□□□□ -0.75
USH1C-205ENST00000527020 NOTCH2NLQ7Z3S9 236 aa10.35□□□□□ -0.75
USH1C-205ENST00000527020 MPLKIPQ8TAP9 179 aa10.35□□□□□ -0.75
USH1C-205ENST00000527020 LRP1BQ9NZR2 4599 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms