RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 A0A0U1RQV1 116 aa12.7□□□□□ -0.38
SMIM3-201ENST00000526627 K7EQZ3 153 aa12.7□□□□□ -0.38
SMIM3-201ENST00000526627 C9orf163Q8N9P6 203 aa12.7□□□□□ -0.38
SMIM3-201ENST00000526627 SERP1Q9Y6X1 66 aa12.68□□□□□ -0.38
SMIM3-201ENST00000526627 CSMD3Q7Z407 3707 aa12.68□□□□□ -0.38
SMIM3-201ENST00000526627 MDFIQ99750 246 aa12.68□□□□□ -0.38
SMIM3-201ENST00000526627 PLECQ15149 4684 aaKnown RBP12.67□□□□□ -0.38
SMIM3-201ENST00000526627 FAM30AQ9NZY2 134 aa12.67□□□□□ -0.38
SMIM3-201ENST00000526627 NBDYA0A0U1RRE5 68 aa12.66□□□□□ -0.38
SMIM3-201ENST00000526627 H0Y9J4 135 aa12.66□□□□□ -0.38
SMIM3-201ENST00000526627 Q5XG85 94 aa12.66□□□□□ -0.38
SMIM3-201ENST00000526627 Q6ZRN7 208 aaPredicted RBP12.66□□□□□ -0.38
SMIM3-201ENST00000526627 UBE2AP49459 152 aa12.65□□□□□ -0.39
SMIM3-201ENST00000526627 SPRR1BP22528 89 aa12.64□□□□□ -0.39
SMIM3-201ENST00000526627 LCE6AA0A183 80 aa12.63□□□□□ -0.39
SMIM3-201ENST00000526627 PANO1I0J062 215 aa12.63□□□□□ -0.39
SMIM3-201ENST00000526627 A0A087WSZ3 146 aa12.62□□□□□ -0.39
SMIM3-201ENST00000526627 DEFB116Q30KQ4 102 aa12.6□□□□□ -0.39
SMIM3-201ENST00000526627 TENM2Q9NT68 2774 aa12.59□□□□□ -0.39
SMIM3-201ENST00000526627 NUPR2A6NF83 97 aa12.59□□□□□ -0.39
SMIM3-201ENST00000526627 ATP5EP56381 51 aaPredicted RBP12.58□□□□□ -0.4
SMIM3-201ENST00000526627 C4orf26Q17RF5 130 aa12.58□□□□□ -0.4
SMIM3-201ENST00000526627 HCG22E2RYF7 251 aa12.57□□□□□ -0.4
SMIM3-201ENST00000526627 KRTAP13-1Q8IUC0 172 aa12.56□□□□□ -0.4
SMIM3-201ENST00000526627 LINC00474Q9P2X8 69 aa12.56□□□□□ -0.4
SMIM3-201ENST00000526627 PKIGQ9Y2B9 76 aa12.56□□□□□ -0.4
SMIM3-201ENST00000526627 SRRM2Q9UQ35 2752 aaKnown RBP12.54□□□□□ -0.4
SMIM3-201ENST00000526627 VPS13DQ5THJ4 4388 aa12.53□□□□□ -0.4
SMIM3-201ENST00000526627 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.52□□□□□ -0.41
SMIM3-201ENST00000526627 RPL37AP61513 92 aaKnown RBP12.51□□□□□ -0.41
SMIM3-201ENST00000526627 ZCCHC13Q8WW36 166 aaKnown RBP12.51□□□□□ -0.41
SMIM3-201ENST00000526627 SPACA4Q8TDM5 124 aa12.5□□□□□ -0.41
SMIM3-201ENST00000526627 STARD9Q9P2P6 4700 aa12.48□□□□□ -0.41
SMIM3-201ENST00000526627 HRCT1Q6UXD1 115 aa12.48□□□□□ -0.41
SMIM3-201ENST00000526627 FP248Q71RG6 208 aaPredicted RBP12.48□□□□□ -0.41
SMIM3-201ENST00000526627 WFDC13Q8IUB5 93 aa12.47□□□□□ -0.41
SMIM3-201ENST00000526627 LINC00472Q9H8W2 130 aa12.47□□□□□ -0.41
SMIM3-201ENST00000526627 SMIM26A0A096LP01 95 aa12.46□□□□□ -0.41
SMIM3-201ENST00000526627 KRTAP29-1A8MX34 341 aaPredicted RBP12.46□□□□□ -0.41
SMIM3-201ENST00000526627 A0A087WTM6 91 aa12.44□□□□□ -0.42
SMIM3-201ENST00000526627 PRR15Q8IV56 129 aa12.42□□□□□ -0.42
SMIM3-201ENST00000526627 FAM229BQ4G0N7 80 aa12.4□□□□□ -0.42
SMIM3-201ENST00000526627 A8MWP4 228 aa12.4□□□□□ -0.42
SMIM3-201ENST00000526627 PRKDCP78527 4128 aaKnown RBP12.39□□□□□ -0.43
SMIM3-201ENST00000526627 LINC00483Q53H64 154 aa12.36□□□□□ -0.43
SMIM3-201ENST00000526627 CASC2Q6XLA1 102 aa12.36□□□□□ -0.43
SMIM3-201ENST00000526627 Q6ZR54 194 aa12.35□□□□□ -0.43
SMIM3-201ENST00000526627 RTL8CO15255 209 aa12.34□□□□□ -0.43
SMIM3-201ENST00000526627 DNAH17Q9UFH2 4485 aa12.34□□□□□ -0.43
SMIM3-201ENST00000526627 IGLV9-49A0A0B4J1Y8 123 aa12.33□□□□□ -0.44
SMIM3-201ENST00000526627 HECTD4Q9Y4D8 3996 aa12.33□□□□□ -0.44
SMIM3-201ENST00000526627 Q96NJ1 140 aa12.31□□□□□ -0.44
SMIM3-201ENST00000526627 PSORS1C2Q9UIG4 136 aa12.31□□□□□ -0.44
SMIM3-201ENST00000526627 DNAH2Q9P225 4427 aa12.31□□□□□ -0.44
SMIM3-201ENST00000526627 KMT2AQ03164 3969 aa12.3□□□□□ -0.44
SMIM3-201ENST00000526627 IGLV5-52A0A0A0MRZ9 124 aa12.29□□□□□ -0.44
SMIM3-201ENST00000526627 hDV103S1A0JD37 113 aa12.29□□□□□ -0.44
SMIM3-201ENST00000526627 PLAC8Q9NZF1 115 aa12.29□□□□□ -0.44
SMIM3-201ENST00000526627 DNAH8Q96JB1 4490 aa12.28□□□□□ -0.44
SMIM3-201ENST00000526627 MMP24-AS1A0A0U1RRL7 71 aa12.28□□□□□ -0.44
SMIM3-201ENST00000526627 MP68P56378 58 aa12.28□□□□□ -0.44
SMIM3-201ENST00000526627 WWC2-AS2Q96NR7 200 aa12.27□□□□□ -0.45
SMIM3-201ENST00000526627 TRAV22A0A0B4J277 110 aa12.26□□□□□ -0.45
SMIM3-201ENST00000526627 C1orf64Q8NEQ6 169 aa12.26□□□□□ -0.45
SMIM3-201ENST00000526627 LINC00208Q96KT6 92 aa12.26□□□□□ -0.45
SMIM3-201ENST00000526627 MOBPQ13875 183 aa12.25□□□□□ -0.45
SMIM3-201ENST00000526627 CYP4F30PQ9H0H9 118 aa12.25□□□□□ -0.45
SMIM3-201ENST00000526627 H0Y9P7 68 aa12.24□□□□□ -0.45
SMIM3-201ENST00000526627 ZNF706Q9Y5V0 76 aaPredicted RBP12.24□□□□□ -0.45
SMIM3-201ENST00000526627 NDUFB1O75438 58 aa12.22□□□□□ -0.45
SMIM3-201ENST00000526627 ZNF861PO60384 105 aa12.22□□□□□ -0.45
SMIM3-201ENST00000526627 ANAPC11Q9NYG5 84 aa12.22□□□□□ -0.45
SMIM3-201ENST00000526627 MPLKIPQ8TAP9 179 aa12.21□□□□□ -0.45
SMIM3-201ENST00000526627 PRR4Q16378 134 aa12.21□□□□□ -0.46
SMIM3-201ENST00000526627 LINC00336Q6ZUF6 198 aa12.21□□□□□ -0.46
SMIM3-201ENST00000526627 FRAS1Q86XX4 4008 aa12.21□□□□□ -0.46
SMIM3-201ENST00000526627 H3BPC8 53 aa12.2□□□□□ -0.46
SMIM3-201ENST00000526627 ASB16-AS1Q495Z4 193 aa12.2□□□□□ -0.46
SMIM3-201ENST00000526627 FBN3Q75N90 2809 aa12.17□□□□□ -0.46
SMIM3-201ENST00000526627 C1orf134Q5TEV5 83 aa12.16□□□□□ -0.46
SMIM3-201ENST00000526627 MEGF8Q7Z7M0 2845 aa12.16□□□□□ -0.46
SMIM3-201ENST00000526627 C8orf17Q9NRJ1 99 aa12.13□□□□□ -0.47
SMIM3-201ENST00000526627 SPANXA2-OT1Q8N9U9 137 aa12.11□□□□□ -0.47
SMIM3-201ENST00000526627 A0A1B0GVX0 72 aa12.09□□□□□ -0.47
SMIM3-201ENST00000526627 IGLV7-43P04211 117 aa12.09□□□□□ -0.47
SMIM3-201ENST00000526627 IGHV6-1A0A0B4J1U7 121 aa12.06□□□□□ -0.48
SMIM3-201ENST00000526627 DNHD1Q96M86 4753 aa12.06□□□□□ -0.48
SMIM3-201ENST00000526627 LY6G6CO95867 125 aa12.05□□□□□ -0.48
SMIM3-201ENST00000526627 Q1T7F1 81 aa12.05□□□□□ -0.48
SMIM3-201ENST00000526627 TGP01266 2768 aa12.05□□□□□ -0.48
SMIM3-201ENST00000526627 TP53AIP1Q9HCN2 124 aa12.04□□□□□ -0.48
SMIM3-201ENST00000526627 A0A087X002 238 aa12.04□□□□□ -0.48
SMIM3-201ENST00000526627 NOTCH2NLQ7Z3S9 236 aa12.04□□□□□ -0.48
SMIM3-201ENST00000526627 PRO0628Q9UI54 55 aa12.04□□□□□ -0.48
SMIM3-201ENST00000526627 DNAH6Q9C0G6 4158 aa12.03□□□□□ -0.48
SMIM3-201ENST00000526627 DNAH11Q96DT5 4516 aa12.02□□□□□ -0.48
SMIM3-201ENST00000526627 ALMS1Q8TCU4 4167 aa12.02□□□□□ -0.49
SMIM3-201ENST00000526627 KRTAP10-2P60368 255 aa12□□□□□ -0.49
SMIM3-201ENST00000526627 DNAH5Q8TE73 4624 aa12□□□□□ -0.49
SMIM3-201ENST00000526627 CDK2AP2O75956 126 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms