RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 Q6ZRX8 168 aa7.45□□□□□ -1.22
VEGFA-225ENST00000523950 A0A087X002 238 aa7.44□□□□□ -1.22
VEGFA-225ENST00000523950 H0YGX0 51 aa7.44□□□□□ -1.22
VEGFA-225ENST00000523950 SMCR5Q8TEV8 140 aa7.44□□□□□ -1.22
VEGFA-225ENST00000523950 SPRR4Q96PI1 79 aa7.44□□□□□ -1.22
VEGFA-225ENST00000523950 CDIP1Q9H305 208 aa7.44□□□□□ -1.22
VEGFA-225ENST00000523950 TYMSOSQ8TAI1 123 aa7.43□□□□□ -1.22
VEGFA-225ENST00000523950 A0A1B0GV72 72 aa7.42□□□□□ -1.22
VEGFA-225ENST00000523950 Q6Q795 121 aa7.41□□□□□ -1.22
VEGFA-225ENST00000523950 A0A1B0GX51 115 aa7.4□□□□□ -1.22
VEGFA-225ENST00000523950 Q9BRP9 147 aa7.4□□□□□ -1.22
VEGFA-225ENST00000523950 ANAPC11Q9NYG5 84 aa7.4□□□□□ -1.22
VEGFA-225ENST00000523950 TRBV7-6A0A0J9YX20 115 aa7.39□□□□□ -1.23
VEGFA-225ENST00000523950 KRTAP13-2Q52LG2 175 aa7.39□□□□□ -1.23
VEGFA-225ENST00000523950 LINC00483Q53H64 154 aa7.39□□□□□ -1.23
VEGFA-225ENST00000523950 ELOF1P60002 83 aaKnown RBP7.38□□□□□ -1.23
VEGFA-225ENST00000523950 C6orf99Q4VX62 202 aa7.38□□□□□ -1.23
VEGFA-225ENST00000523950 CLEC2BQ92478 149 aa7.38□□□□□ -1.23
VEGFA-225ENST00000523950 DHRS4-AS1Q9P1J3 65 aa7.38□□□□□ -1.23
VEGFA-225ENST00000523950 ERC2-IT1O76042 136 aa7.37□□□□□ -1.23
VEGFA-225ENST00000523950 SNCGO76070 127 aa7.37□□□□□ -1.23
VEGFA-225ENST00000523950 COX7BP24311 80 aa7.37□□□□□ -1.23
VEGFA-225ENST00000523950 TEX49A0A1B0GTD5 131 aa7.36□□□□□ -1.23
VEGFA-225ENST00000523950 DNAL4O96015 105 aa7.35□□□□□ -1.23
VEGFA-225ENST00000523950 GAGE2AQ6NT46 116 aa7.35□□□□□ -1.23
VEGFA-225ENST00000523950 LINC00304Q8N9R0 145 aa7.35□□□□□ -1.23
VEGFA-225ENST00000523950 IMUPQ9GZP8 106 aa7.35□□□□□ -1.23
VEGFA-225ENST00000523950 HMCN2Q8NDA2 5059 aa7.35□□□□□ -1.23
VEGFA-225ENST00000523950 H3BQ85 93 aa7.33□□□□□ -1.24
VEGFA-225ENST00000523950 MT-ATP8P03928 68 aa7.33□□□□□ -1.24
VEGFA-225ENST00000523950 BAALC-AS2P0C853 105 aa7.33□□□□□ -1.24
VEGFA-225ENST00000523950 SPAG11AQ6PDA7 123 aa7.33□□□□□ -1.24
VEGFA-225ENST00000523950 C3orf22Q8N5N4 141 aa7.33□□□□□ -1.24
VEGFA-225ENST00000523950 SMIM11BQ8TCY0 68 aa7.33□□□□□ -1.24
VEGFA-225ENST00000523950 SPRR1BP22528 89 aa7.31□□□□□ -1.24
VEGFA-225ENST00000523950 SSBP3-AS1Q7Z2R9 100 aa7.3□□□□□ -1.24
VEGFA-225ENST00000523950 ST20-AS1Q8NBB2 130 aa7.3□□□□□ -1.24
VEGFA-225ENST00000523950 TRBV7-7A0A0K0K1E9 115 aa7.29□□□□□ -1.24
VEGFA-225ENST00000523950 C4orf48Q5BLP8 95 aa7.29□□□□□ -1.24
VEGFA-225ENST00000523950 LINC00643Q86TS7 51 aa7.29□□□□□ -1.24
VEGFA-225ENST00000523950 GHRHP01286 108 aa7.28□□□□□ -1.24
VEGFA-225ENST00000523950 OBSCN-AS1Q96MR7 158 aa7.28□□□□□ -1.24
VEGFA-225ENST00000523950 IGLV9-49A0A0B4J1Y8 123 aa7.27□□□□□ -1.25
VEGFA-225ENST00000523950 JMJD7-PLA2G4BH0Y9G9 81 aa7.27□□□□□ -1.25
VEGFA-225ENST00000523950 MOBPQ13875 183 aa7.27□□□□□ -1.25
VEGFA-225ENST00000523950 Q8NBF4 154 aa7.27□□□□□ -1.25
VEGFA-225ENST00000523950 ORMDL1Q9P0S3 153 aa7.27□□□□□ -1.25
VEGFA-225ENST00000523950 SPINK1P00995 79 aa7.26□□□□□ -1.25
VEGFA-225ENST00000523950 LCE2DQ5TA82 110 aaPredicted RBP7.26□□□□□ -1.25
VEGFA-225ENST00000523950 FAM218AQ96MZ4 157 aa7.26□□□□□ -1.25
VEGFA-225ENST00000523950 LAMTOR3Q9UHA4 124 aa7.26□□□□□ -1.25
VEGFA-225ENST00000523950 IGLV5-48A0A075B6I7 105 aa7.25□□□□□ -1.25
VEGFA-225ENST00000523950 TMEM256-PLSCR3K7ERE1 68 aa7.25□□□□□ -1.25
VEGFA-225ENST00000523950 C9orf153Q5TBE3 101 aa7.25□□□□□ -1.25
VEGFA-225ENST00000523950 ANAPC13Q9BS18 74 aa7.25□□□□□ -1.25
VEGFA-225ENST00000523950 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
VEGFA-225ENST00000523950 LINC00575Q6W349 94 aa7.24□□□□□ -1.25
VEGFA-225ENST00000523950 NDUFV3P56181 108 aaKnown RBP7.23□□□□□ -1.25
VEGFA-225ENST00000523950 PRR4Q16378 134 aa7.23□□□□□ -1.25
VEGFA-225ENST00000523950 hADV29S1A0JD25 119 aa7.22□□□□□ -1.25
VEGFA-225ENST00000523950 DEFB105AQ8NG35 78 aa7.22□□□□□ -1.25
VEGFA-225ENST00000523950 LINC01547P58512 204 aaPredicted RBP7.21□□□□□ -1.26
VEGFA-225ENST00000523950 PDE6GP18545 87 aa7.19□□□□□ -1.26
VEGFA-225ENST00000523950 ATP5EP2Q5VTU8 51 aa7.19□□□□□ -1.26
VEGFA-225ENST00000523950 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.19□□□□□ -1.26
VEGFA-225ENST00000523950 SMIM29Q86T20 159 aa7.19□□□□□ -1.26
VEGFA-225ENST00000523950 Q6ZQY7 126 aa7.18□□□□□ -1.26
VEGFA-225ENST00000523950 Q8N377 158 aa7.18□□□□□ -1.26
VEGFA-225ENST00000523950 Q6JHZ5 121 aa7.17□□□□□ -1.26
VEGFA-225ENST00000523950 FP248Q71RG6 208 aaPredicted RBP7.17□□□□□ -1.26
VEGFA-225ENST00000523950 CCKP06307 115 aa7.16□□□□□ -1.26
VEGFA-225ENST00000523950 CD164Q04900 197 aa7.16□□□□□ -1.26
VEGFA-225ENST00000523950 RETNLBQ9BQ08 111 aa7.16□□□□□ -1.26
VEGFA-225ENST00000523950 F8WEM9 126 aa7.15□□□□□ -1.26
VEGFA-225ENST00000523950 LIMD2Q9BT23 127 aa7.15□□□□□ -1.26
VEGFA-225ENST00000523950 C14orf132Q9NPU4 83 aa7.14□□□□□ -1.27
VEGFA-225ENST00000523950 LRP2P98164 4655 aa7.13□□□□□ -1.27
VEGFA-225ENST00000523950 IGLV7-46A0A075B6I9 117 aa7.13□□□□□ -1.27
VEGFA-225ENST00000523950 LOC110117498A0A087WWA1 95 aa7.13□□□□□ -1.27
VEGFA-225ENST00000523950 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
VEGFA-225ENST00000523950 ATOX1O00244 68 aa7.11□□□□□ -1.27
VEGFA-225ENST00000523950 UBR4Q5T4S7 5183 aa7.11□□□□□ -1.27
VEGFA-225ENST00000523950 IGLV8-61A0A075B6I0 122 aa7.1□□□□□ -1.27
VEGFA-225ENST00000523950 RBM3P98179 157 aaKnown RBP7.1□□□□□ -1.27
VEGFA-225ENST00000523950 LPAP08519 4548 aa7.09□□□□□ -1.27
VEGFA-225ENST00000523950 FAM236AA0A1B0GUQ0 79 aa7.09□□□□□ -1.27
VEGFA-225ENST00000523950 FAM236BA0A1B0GV22 79 aa7.09□□□□□ -1.27
VEGFA-225ENST00000523950 HIST1H4AP62805 103 aaKnown RBP7.09□□□□□ -1.27
VEGFA-225ENST00000523950 Q5XG85 94 aa7.09□□□□□ -1.27
VEGFA-225ENST00000523950 UBL5Q9BZL1 73 aa7.09□□□□□ -1.27
VEGFA-225ENST00000523950 HRCT1Q6UXD1 115 aa7.08□□□□□ -1.28
VEGFA-225ENST00000523950 LINC00846Q9NV44 126 aa7.08□□□□□ -1.28
VEGFA-225ENST00000523950 UQCRQO14949 82 aa7.07□□□□□ -1.28
VEGFA-225ENST00000523950 DSCR8Q96T75 97 aa7.07□□□□□ -1.28
VEGFA-225ENST00000523950 A0A1B0GW54 56 aa7.05□□□□□ -1.28
VEGFA-225ENST00000523950 Q6ZQT0 140 aa7.05□□□□□ -1.28
VEGFA-225ENST00000523950 IGFL1Q6UW32 110 aa7.04□□□□□ -1.28
VEGFA-225ENST00000523950 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
VEGFA-225ENST00000523950 A0A0G2JQZ4 141 aa7.02□□□□□ -1.29
VEGFA-225ENST00000523950 COX7CP15954 63 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms