RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 PRR4Q16378 134 aa4.48□□□□□ -1.69
CTNNA1-227ENST00000521387 GAGE2EQ4V326 116 aa4.48□□□□□ -1.69
CTNNA1-227ENST00000521387 LINC00575Q6W349 94 aa4.48□□□□□ -1.69
CTNNA1-227ENST00000521387 OBSCN-AS1Q96MR7 158 aa4.48□□□□□ -1.69
CTNNA1-227ENST00000521387 ORMDL1Q9P0S3 153 aa4.48□□□□□ -1.69
CTNNA1-227ENST00000521387 GAGE2DQ9UEU5 116 aa4.48□□□□□ -1.69
CTNNA1-227ENST00000521387 FAM240AA0A1B0GVK7 77 aa4.47□□□□□ -1.69
CTNNA1-227ENST00000521387 USP17L23D6RBM5 183 aa4.47□□□□□ -1.69
CTNNA1-227ENST00000521387 NDUFC2-KCTD14E9PQ53 114 aa4.47□□□□□ -1.69
CTNNA1-227ENST00000521387 M0R378 163 aa4.47□□□□□ -1.69
CTNNA1-227ENST00000521387 LINC01547P58512 204 aaPredicted RBP4.47□□□□□ -1.69
CTNNA1-227ENST00000521387 Q6ZRP5 223 aa4.47□□□□□ -1.69
CTNNA1-227ENST00000521387 NEBP20929 6669 aa4.46□□□□□ -1.7
CTNNA1-227ENST00000521387 TRAV23DV6A0A075B6W5 121 aa4.45□□□□□ -1.7
CTNNA1-227ENST00000521387 hADV29S1A0JD25 119 aa4.45□□□□□ -1.7
CTNNA1-227ENST00000521387 ACYP1P07311 99 aa4.45□□□□□ -1.7
CTNNA1-227ENST00000521387 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
CTNNA1-227ENST00000521387 SMCR5Q8TEV8 140 aa4.45□□□□□ -1.7
CTNNA1-227ENST00000521387 DIRC1Q969H9 104 aa4.45□□□□□ -1.7
CTNNA1-227ENST00000521387 RMI2Q96E14 147 aa4.45□□□□□ -1.7
CTNNA1-227ENST00000521387 C14orf132Q9NPU4 83 aa4.45□□□□□ -1.7
CTNNA1-227ENST00000521387 A0A1B0GV72 72 aa4.44□□□□□ -1.7
CTNNA1-227ENST00000521387 COX7BP24311 80 aa4.44□□□□□ -1.7
CTNNA1-227ENST00000521387 GAGE2AQ6NT46 116 aa4.44□□□□□ -1.7
CTNNA1-227ENST00000521387 REG3GQ6UW15 175 aa4.44□□□□□ -1.7
CTNNA1-227ENST00000521387 TMEM256-PLSCR3K7ERE1 68 aa4.43□□□□□ -1.7
CTNNA1-227ENST00000521387 ZNF73O43830 326 aaPredicted RBP4.43□□□□□ -1.7
CTNNA1-227ENST00000521387 SNCGO76070 127 aa4.43□□□□□ -1.7
CTNNA1-227ENST00000521387 SPINK6Q6UWN8 80 aa4.43□□□□□ -1.7
CTNNA1-227ENST00000521387 SDIM1Q6ZPB5 146 aa4.43□□□□□ -1.7
CTNNA1-227ENST00000521387 C7orf33Q8WU49 177 aa4.43□□□□□ -1.7
CTNNA1-227ENST00000521387 TRBV7-6A0A0J9YX20 115 aa4.42□□□□□ -1.7
CTNNA1-227ENST00000521387 ELOF1P60002 83 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-227ENST00000521387 GAGE2BQ13066 116 aa4.42□□□□□ -1.7
CTNNA1-227ENST00000521387 Q6Q795 121 aa4.42□□□□□ -1.7
CTNNA1-227ENST00000521387 KRTAP7-1Q8IUC3 87 aa4.42□□□□□ -1.7
CTNNA1-227ENST00000521387 IGLV5-37A0A075B6J1 123 aa4.41□□□□□ -1.7
CTNNA1-227ENST00000521387 FAM168BA1KXE4 195 aa4.41□□□□□ -1.7
CTNNA1-227ENST00000521387 JMJD7-PLA2G4BH0Y9G9 81 aa4.41□□□□□ -1.7
CTNNA1-227ENST00000521387 CCKP06307 115 aa4.41□□□□□ -1.7
CTNNA1-227ENST00000521387 Q6ZQY7 126 aa4.41□□□□□ -1.7
CTNNA1-227ENST00000521387 LINC00643Q86TS7 51 aa4.41□□□□□ -1.7
CTNNA1-227ENST00000521387 NKAPP1Q8N9T2 125 aa4.41□□□□□ -1.7
CTNNA1-227ENST00000521387 LOC107984640A0A0U1RRK4 108 aa4.4□□□□□ -1.71
CTNNA1-227ENST00000521387 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-227ENST00000521387 C9orf163Q8N9P6 203 aa4.4□□□□□ -1.71
CTNNA1-227ENST00000521387 KRTAP4-1Q9BYQ7 146 aa4.4□□□□□ -1.71
CTNNA1-227ENST00000521387 KCNQ1DNQ9H478 68 aa4.4□□□□□ -1.71
CTNNA1-227ENST00000521387 LINC00846Q9NV44 126 aa4.4□□□□□ -1.71
CTNNA1-227ENST00000521387 TRBV7-7A0A0K0K1E9 115 aa4.39□□□□□ -1.71
CTNNA1-227ENST00000521387 RPL37AP8A6NKH3 93 aa4.39□□□□□ -1.71
CTNNA1-227ENST00000521387 IGLV1-50A0A075B6I6 118 aa4.38□□□□□ -1.71
CTNNA1-227ENST00000521387 H3BQ85 93 aa4.38□□□□□ -1.71
CTNNA1-227ENST00000521387 CHTF8P0CG12 524 aa4.38□□□□□ -1.71
CTNNA1-227ENST00000521387 Q6ZQT0 140 aa4.38□□□□□ -1.71
CTNNA1-227ENST00000521387 LAMTOR3Q9UHA4 124 aa4.38□□□□□ -1.71
CTNNA1-227ENST00000521387 LOC110117498A0A087WWA1 95 aa4.37□□□□□ -1.71
CTNNA1-227ENST00000521387 KRTAP4-16G5E9R7 235 aaPredicted RBP4.37□□□□□ -1.71
CTNNA1-227ENST00000521387 PRYO14603 147 aa4.37□□□□□ -1.71
CTNNA1-227ENST00000521387 NDUFV3P56181 108 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-227ENST00000521387 RBM3P98179 157 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-227ENST00000521387 Q6JHZ5 121 aa4.37□□□□□ -1.71
CTNNA1-227ENST00000521387 FAM19A5Q7Z5A7 132 aaPredicted RBP4.37□□□□□ -1.71
CTNNA1-227ENST00000521387 PRR26Q8N8Z3 221 aa4.37□□□□□ -1.71
CTNNA1-227ENST00000521387 PLAC8Q9NZF1 115 aa4.37□□□□□ -1.71
CTNNA1-227ENST00000521387 A0A096LNI7 61 aa4.36□□□□□ -1.71
CTNNA1-227ENST00000521387 IGKV3D-7A0A0C4DH55 119 aa4.36□□□□□ -1.71
CTNNA1-227ENST00000521387 B5MCH6 92 aa4.36□□□□□ -1.71
CTNNA1-227ENST00000521387 SPRR1AP35321 89 aa4.36□□□□□ -1.71
CTNNA1-227ENST00000521387 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-227ENST00000521387 CNBPP62633 177 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-227ENST00000521387 MT1HP80294 61 aa4.36□□□□□ -1.71
CTNNA1-227ENST00000521387 IMUPQ9GZP8 106 aa4.36□□□□□ -1.71
CTNNA1-227ENST00000521387 PSORS1C2Q9UIG4 136 aa4.36□□□□□ -1.71
CTNNA1-227ENST00000521387 A0A1W2PNN7 141 aa4.35□□□□□ -1.71
CTNNA1-227ENST00000521387 MRPL55Q7Z7F7 128 aaKnown RBP4.35□□□□□ -1.71
CTNNA1-227ENST00000521387 Q9BRP9 147 aa4.35□□□□□ -1.71
CTNNA1-227ENST00000521387 ANAPC13Q9BS18 74 aa4.35□□□□□ -1.71
CTNNA1-227ENST00000521387 IGKV2-24A0A0C4DH68 120 aa4.34□□□□□ -1.71
CTNNA1-227ENST00000521387 ETDCA0A1B0GVM5 59 aa4.34□□□□□ -1.71
CTNNA1-227ENST00000521387 C14orf177Q52M58 125 aa4.34□□□□□ -1.71
CTNNA1-227ENST00000521387 Q8N377 158 aa4.34□□□□□ -1.71
CTNNA1-227ENST00000521387 SPACA4Q8TDM5 124 aa4.34□□□□□ -1.71
CTNNA1-227ENST00000521387 TRBV7-4A0A0J9YYF1 115 aa4.33□□□□□ -1.72
CTNNA1-227ENST00000521387 ERC2-IT1O76042 136 aa4.33□□□□□ -1.72
CTNNA1-227ENST00000521387 KRTAP19-2Q3LHN2 52 aa4.33□□□□□ -1.72
CTNNA1-227ENST00000521387 Q6ZRX8 168 aa4.33□□□□□ -1.72
CTNNA1-227ENST00000521387 DEFB105AQ8NG35 78 aa4.33□□□□□ -1.72
CTNNA1-227ENST00000521387 DSCR8Q96T75 97 aa4.33□□□□□ -1.72
CTNNA1-227ENST00000521387 DHRS4-AS1Q9P1J3 65 aa4.33□□□□□ -1.72
CTNNA1-227ENST00000521387 FAM236AA0A1B0GUQ0 79 aa4.32□□□□□ -1.72
CTNNA1-227ENST00000521387 FAM236BA0A1B0GV22 79 aa4.32□□□□□ -1.72
CTNNA1-227ENST00000521387 PDE6GP18545 87 aa4.32□□□□□ -1.72
CTNNA1-227ENST00000521387 ST20-AS1Q8NBB2 130 aa4.32□□□□□ -1.72
CTNNA1-227ENST00000521387 PHF5AQ7RTV0 110 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-227ENST00000521387 KRTAP11-1Q8IUC1 163 aa4.31□□□□□ -1.72
CTNNA1-227ENST00000521387 DPH3Q96FX2 82 aa4.31□□□□□ -1.72
CTNNA1-227ENST00000521387 CCDC179H3BU77 68 aa4.3□□□□□ -1.72
CTNNA1-227ENST00000521387 HIST1H4AP62805 103 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-227ENST00000521387 UBE2BP63146 152 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms