RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 PFN2P35080 140 aa3.62□□□□□ -1.83
CTNNA1-220ENST00000520260 ATP5EP56381 51 aaPredicted RBP3.62□□□□□ -1.83
CTNNA1-220ENST00000520260 RPL37AP61513 92 aaKnown RBP3.62□□□□□ -1.83
CTNNA1-220ENST00000520260 UBE2BP63146 152 aa3.62□□□□□ -1.83
CTNNA1-220ENST00000520260 KLKP1Q107X0 134 aa3.62□□□□□ -1.83
CTNNA1-220ENST00000520260 SCXQ7RTU7 201 aa3.62□□□□□ -1.83
CTNNA1-220ENST00000520260 PLAC8Q9NZF1 115 aa3.62□□□□□ -1.83
CTNNA1-220ENST00000520260 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
CTNNA1-220ENST00000520260 HECTD4Q9Y4D8 3996 aa3.61□□□□□ -1.83
CTNNA1-220ENST00000520260 TRAV23DV6A0A075B6W5 121 aa3.61□□□□□ -1.83
CTNNA1-220ENST00000520260 NDUFC1O43677 76 aa3.61□□□□□ -1.83
CTNNA1-220ENST00000520260 SLPIP03973 132 aa3.61□□□□□ -1.83
CTNNA1-220ENST00000520260 PDE6GP18545 87 aa3.61□□□□□ -1.83
CTNNA1-220ENST00000520260 UNQ6190/PRO20217Q6UXQ8 127 aa3.61□□□□□ -1.83
CTNNA1-220ENST00000520260 Q6ZRP5 223 aa3.61□□□□□ -1.83
CTNNA1-220ENST00000520260 FAM19A1Q7Z5A9 133 aa3.61□□□□□ -1.83
CTNNA1-220ENST00000520260 C20orf197Q8N268 126 aa3.61□□□□□ -1.83
CTNNA1-220ENST00000520260 CIRBP-AS1Q8TBR5 109 aa3.61□□□□□ -1.83
CTNNA1-220ENST00000520260 C6orf48Q9UBA6 75 aa3.61□□□□□ -1.83
CTNNA1-220ENST00000520260 A0A096LNI7 61 aa3.6□□□□□ -1.83
CTNNA1-220ENST00000520260 CXCL6P80162 114 aa3.6□□□□□ -1.83
CTNNA1-220ENST00000520260 KIAA0087Q14695 138 aa3.6□□□□□ -1.83
CTNNA1-220ENST00000520260 Q5VSD8 79 aa3.6□□□□□ -1.83
CTNNA1-220ENST00000520260 Q6ZQT0 140 aa3.6□□□□□ -1.83
CTNNA1-220ENST00000520260 ERC2-IT1O76042 136 aa3.59□□□□□ -1.83
CTNNA1-220ENST00000520260 C9orf116Q5BN46 136 aaPredicted RBP3.59□□□□□ -1.83
CTNNA1-220ENST00000520260 REG3GQ6UW15 175 aa3.59□□□□□ -1.83
CTNNA1-220ENST00000520260 LINC00575Q6W349 94 aa3.59□□□□□ -1.83
CTNNA1-220ENST00000520260 PLA2G2DQ9UNK4 145 aa3.59□□□□□ -1.83
CTNNA1-220ENST00000520260 FRAS1Q86XX4 4008 aa3.58□□□□□ -1.84
CTNNA1-220ENST00000520260 LINC01547P58512 204 aaPredicted RBP3.58□□□□□ -1.84
CTNNA1-220ENST00000520260 RBM3P98179 157 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-220ENST00000520260 CHTF8P0CG12 524 aa3.57□□□□□ -1.84
CTNNA1-220ENST00000520260 FUSP35637 526 aaKnown RBP eCLIP3.57□□□□□ -1.84
CTNNA1-220ENST00000520260 Q6ZVQ6 151 aa3.57□□□□□ -1.84
CTNNA1-220ENST00000520260 MRPL55Q7Z7F7 128 aaKnown RBP3.57□□□□□ -1.84
CTNNA1-220ENST00000520260 DNAH10Q8IVF4 4471 aa3.56□□□□□ -1.84
CTNNA1-220ENST00000520260 SMR3BP02814 79 aaPredicted RBP3.56□□□□□ -1.84
CTNNA1-220ENST00000520260 C10orf25Q5T742 122 aa3.56□□□□□ -1.84
CTNNA1-220ENST00000520260 FP248Q71RG6 208 aaPredicted RBP3.56□□□□□ -1.84
CTNNA1-220ENST00000520260 DIRC1Q969H9 104 aa3.56□□□□□ -1.84
CTNNA1-220ENST00000520260 XAGE1AQ9HD64 81 aa3.56□□□□□ -1.84
CTNNA1-220ENST00000520260 FAM30AQ9NZY2 134 aa3.56□□□□□ -1.84
CTNNA1-220ENST00000520260 BIRC6Q9NR09 4857 aa3.56□□□□□ -1.84
CTNNA1-220ENST00000520260 DNAH2Q9P225 4427 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 DNAH17Q9UFH2 4485 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 IGLV5-37A0A075B6J1 123 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 TRBV7-6A0A0J9YX20 115 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 TRBV7-4A0A0J9YYF1 115 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 F8WEM9 126 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 M0R378 163 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 UBE2AP49459 152 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 PRR3P79522 188 aaKnown RBP3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 C6orf99Q4VX62 202 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 C1orf137Q5JT78 98 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 SPINK6Q6UWN8 80 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 ZNF706Q9Y5V0 76 aaPredicted RBP3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 FAT2Q9NYQ8 4349 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 PKHD1P08F94 4074 aa3.55□□□□□ -1.84
CTNNA1-220ENST00000520260 EPPK1P58107 5090 aaKnown RBP3.54□□□□□ -1.84
CTNNA1-220ENST00000520260 IGLV6-57P01721 117 aa3.54□□□□□ -1.84
CTNNA1-220ENST00000520260 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.54□□□□□ -1.84
CTNNA1-220ENST00000520260 ETDCA0A1B0GVM5 59 aa3.53□□□□□ -1.84
CTNNA1-220ENST00000520260 PRYO14603 147 aa3.53□□□□□ -1.84
CTNNA1-220ENST00000520260 HAMPP81172 84 aa3.53□□□□□ -1.84
CTNNA1-220ENST00000520260 NREPQ16612 68 aa3.53□□□□□ -1.84
CTNNA1-220ENST00000520260 LAMTOR3Q9UHA4 124 aa3.53□□□□□ -1.84
CTNNA1-220ENST00000520260 A0A0U1RQV1 116 aa3.52□□□□□ -1.85
CTNNA1-220ENST00000520260 A0A1W2PNN7 141 aa3.52□□□□□ -1.85
CTNNA1-220ENST00000520260 PHF5AQ7RTV0 110 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-220ENST00000520260 Q8NDZ9 215 aa3.52□□□□□ -1.85
CTNNA1-220ENST00000520260 TMEM254Q8TBM7 123 aa3.52□□□□□ -1.85
CTNNA1-220ENST00000520260 SNURFQ9Y675 71 aa3.52□□□□□ -1.85
CTNNA1-220ENST00000520260 PKD1P98161 4303 aa3.52□□□□□ -1.85
CTNNA1-220ENST00000520260 DNAH11Q96DT5 4516 aa3.52□□□□□ -1.85
CTNNA1-220ENST00000520260 IGLV7-43P04211 117 aa3.51□□□□□ -1.85
CTNNA1-220ENST00000520260 VPREB1P12018 145 aa3.51□□□□□ -1.85
CTNNA1-220ENST00000520260 COX7BP24311 80 aa3.51□□□□□ -1.85
CTNNA1-220ENST00000520260 Q6ZQY7 126 aa3.51□□□□□ -1.85
CTNNA1-220ENST00000520260 PSORS1C2Q9UIG4 136 aa3.51□□□□□ -1.85
CTNNA1-220ENST00000520260 IGLV1-50A0A075B6I6 118 aa3.5□□□□□ -1.85
CTNNA1-220ENST00000520260 FAM168BA1KXE4 195 aa3.5□□□□□ -1.85
CTNNA1-220ENST00000520260 H0Y9J4 135 aa3.5□□□□□ -1.85
CTNNA1-220ENST00000520260 PANO1I0J062 215 aa3.5□□□□□ -1.85
CTNNA1-220ENST00000520260 BPY2O14599 106 aa3.5□□□□□ -1.85
CTNNA1-220ENST00000520260 ZNF861PO60384 105 aa3.5□□□□□ -1.85
CTNNA1-220ENST00000520260 SERTAD4-AS1Q5TG53 156 aa3.5□□□□□ -1.85
CTNNA1-220ENST00000520260 OCR1Q9BZK8 76 aa3.5□□□□□ -1.85
CTNNA1-220ENST00000520260 A0A1B0GW54 56 aa3.49□□□□□ -1.85
CTNNA1-220ENST00000520260 RPL37AP8A6NKH3 93 aa3.49□□□□□ -1.85
CTNNA1-220ENST00000520260 IGKV4-1P06312 121 aa3.49□□□□□ -1.85
CTNNA1-220ENST00000520260 ELOF1P60002 83 aaKnown RBP3.49□□□□□ -1.85
CTNNA1-220ENST00000520260 KCNQ1DNQ9H478 68 aa3.49□□□□□ -1.85
CTNNA1-220ENST00000520260 DHRS4-AS1Q9P1J3 65 aa3.49□□□□□ -1.85
CTNNA1-220ENST00000520260 C1orf195Q5TG92 126 aa3.48□□□□□ -1.85
CTNNA1-220ENST00000520260 KRTAP29-1A8MX34 341 aaPredicted RBP3.47□□□□□ -1.85
CTNNA1-220ENST00000520260 ZNF73O43830 326 aaPredicted RBP3.47□□□□□ -1.85
CTNNA1-220ENST00000520260 V9GYY9 64 aa3.47□□□□□ -1.85
CTNNA1-220ENST00000520260 hDV103S1A0JD37 113 aa3.46□□□□□ -1.86
CTNNA1-220ENST00000520260 FAM229BQ4G0N7 80 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms