RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 IGHV3-53P01767 116 aa4.55□□□□□ -1.68
CLK4-202ENST00000519132 MGAM2Q2M2H8 2515 aa4.54□□□□□ -1.68
CLK4-202ENST00000519132 FAM74A4Q5TZK3 123 aa4.54□□□□□ -1.68
CLK4-202ENST00000519132 NOTCH1P46531 2555 aa4.54□□□□□ -1.68
CLK4-202ENST00000519132 MGPP08493 103 aa4.54□□□□□ -1.68
CLK4-202ENST00000519132 Q8NDZ9 215 aa4.54□□□□□ -1.68
CLK4-202ENST00000519132 TRBV10-1A0A0K0K1A3 114 aa4.53□□□□□ -1.68
CLK4-202ENST00000519132 PRB2P02812 416 aaPredicted RBP4.53□□□□□ -1.68
CLK4-202ENST00000519132 SPART-AS1P0CW21 52 aa4.53□□□□□ -1.68
CLK4-202ENST00000519132 TRGV2A0A075B6R0 118 aa4.53□□□□□ -1.68
CLK4-202ENST00000519132 TRBV6-4A0A1B0GX49 114 aa4.53□□□□□ -1.68
CLK4-202ENST00000519132 GAS8-AS1O95177 125 aa4.53□□□□□ -1.68
CLK4-202ENST00000519132 DNHD1Q96M86 4753 aa4.53□□□□□ -1.68
CLK4-202ENST00000519132 DSCR10P59022 87 aa4.52□□□□□ -1.69
CLK4-202ENST00000519132 IGHV3-30-3P0DP02 117 aa4.52□□□□□ -1.69
CLK4-202ENST00000519132 POLR2KP53803 58 aaKnown RBP4.52□□□□□ -1.69
CLK4-202ENST00000519132 MIAQ16674 131 aa4.52□□□□□ -1.69
CLK4-202ENST00000519132 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
CLK4-202ENST00000519132 RPL39LQ96EH5 51 aaKnown RBP4.52□□□□□ -1.69
CLK4-202ENST00000519132 SMIM2Q9BVW6 85 aa4.52□□□□□ -1.69
CLK4-202ENST00000519132 NBEAL2Q6ZNJ1 2754 aa4.51□□□□□ -1.69
CLK4-202ENST00000519132 RTL8CO15255 209 aa4.51□□□□□ -1.69
CLK4-202ENST00000519132 DEFB130BP0DP73 79 aa4.51□□□□□ -1.69
CLK4-202ENST00000519132 DEFB130AP0DP74 79 aa4.51□□□□□ -1.69
CLK4-202ENST00000519132 IGHV3-73A0A0B4J1V6 119 aa4.5□□□□□ -1.69
CLK4-202ENST00000519132 BPY2O14599 106 aa4.5□□□□□ -1.69
CLK4-202ENST00000519132 DEFB4AO15263 64 aa4.5□□□□□ -1.69
CLK4-202ENST00000519132 IGLV4-69A0A075B6H9 119 aa4.5□□□□□ -1.69
CLK4-202ENST00000519132 TRGV4A0A0C4DH28 118 aa4.5□□□□□ -1.69
CLK4-202ENST00000519132 CSAG1Q6PB30 78 aa4.5□□□□□ -1.69
CLK4-202ENST00000519132 PRO0255Q9UI72 69 aa4.5□□□□□ -1.69
CLK4-202ENST00000519132 ZNF625Q96I27 306 aaPredicted RBP4.5□□□□□ -1.69
CLK4-202ENST00000519132 HIGD2AQ9BW72 106 aa4.5□□□□□ -1.69
CLK4-202ENST00000519132 HUWE1Q7Z6Z7 4374 aaKnown RBP4.49□□□□□ -1.69
CLK4-202ENST00000519132 A8MWP4 228 aa4.49□□□□□ -1.69
CLK4-202ENST00000519132 ELOF1P60002 83 aaKnown RBP4.49□□□□□ -1.69
CLK4-202ENST00000519132 DEFB116Q30KQ4 102 aa4.49□□□□□ -1.69
CLK4-202ENST00000519132 H3BNG1 76 aa4.49□□□□□ -1.69
CLK4-202ENST00000519132 MIR22HGQ0VDD5 57 aa4.49□□□□□ -1.69
CLK4-202ENST00000519132 DNAH9Q9NYC9 4486 aa4.49□□□□□ -1.69
CLK4-202ENST00000519132 IGLV1-50A0A075B6I6 118 aa4.48□□□□□ -1.69
CLK4-202ENST00000519132 Q6ZQT0 140 aa4.48□□□□□ -1.69
CLK4-202ENST00000519132 TENM3Q9P273 2699 aa4.48□□□□□ -1.69
CLK4-202ENST00000519132 Q6ZR54 194 aa4.48□□□□□ -1.69
CLK4-202ENST00000519132 A0A1W2PNM2 257 aa4.47□□□□□ -1.69
CLK4-202ENST00000519132 JMJD7-PLA2G4BH0Y9G9 81 aa4.47□□□□□ -1.69
CLK4-202ENST00000519132 P0C880 135 aa4.47□□□□□ -1.69
CLK4-202ENST00000519132 Q9BRP9 147 aa4.47□□□□□ -1.69
CLK4-202ENST00000519132 ORMDL1Q9P0S3 153 aa4.46□□□□□ -1.69
CLK4-202ENST00000519132 LCE6AA0A183 80 aa4.46□□□□□ -1.7
CLK4-202ENST00000519132 NCR3O14931 201 aa4.46□□□□□ -1.7
CLK4-202ENST00000519132 LECT2O14960 151 aa4.46□□□□□ -1.7
CLK4-202ENST00000519132 COL7A1Q02388 2944 aa4.45□□□□□ -1.7
CLK4-202ENST00000519132 MIR7-3HGQ8N6C7 128 aa4.45□□□□□ -1.7
CLK4-202ENST00000519132 CHCHD7Q9BUK0 85 aa4.45□□□□□ -1.7
CLK4-202ENST00000519132 MEGF8Q7Z7M0 2845 aa4.45□□□□□ -1.7
CLK4-202ENST00000519132 ZCCHC13Q8WW36 166 aaKnown RBP4.44□□□□□ -1.7
CLK4-202ENST00000519132 DEFB131BA0A096LNP1 70 aa4.44□□□□□ -1.7
CLK4-202ENST00000519132 K7ERS5 55 aa4.44□□□□□ -1.7
CLK4-202ENST00000519132 PRKDCP78527 4128 aaKnown RBP4.43□□□□□ -1.7
CLK4-202ENST00000519132 A0A096LPF7 62 aa4.43□□□□□ -1.7
CLK4-202ENST00000519132 HTN3P15516 51 aa4.43□□□□□ -1.7
CLK4-202ENST00000519132 LINC00208Q96KT6 92 aa4.43□□□□□ -1.7
CLK4-202ENST00000519132 NDUFB1O75438 58 aa4.42□□□□□ -1.7
CLK4-202ENST00000519132 HAMPP81172 84 aa4.42□□□□□ -1.7
CLK4-202ENST00000519132 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
CLK4-202ENST00000519132 PLAC8Q9NZF1 115 aa4.42□□□□□ -1.7
CLK4-202ENST00000519132 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
CLK4-202ENST00000519132 RPL39P62891 51 aaKnown RBP4.41□□□□□ -1.7
CLK4-202ENST00000519132 LELP1Q5T871 98 aa4.41□□□□□ -1.7
CLK4-202ENST00000519132 MUC7Q8TAX7 377 aa4.41□□□□□ -1.7
CLK4-202ENST00000519132 SPAG11BQ08648 103 aa4.41□□□□□ -1.7
CLK4-202ENST00000519132 SPAG11AQ6PDA7 123 aa4.41□□□□□ -1.7
CLK4-202ENST00000519132 H0YGX0 51 aa4.4□□□□□ -1.7
CLK4-202ENST00000519132 DEFB104AQ8WTQ1 72 aa4.4□□□□□ -1.7
CLK4-202ENST00000519132 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.4□□□□□ -1.71
CLK4-202ENST00000519132 IGKV2-29A2NJV5 120 aaPredicted RBP4.4□□□□□ -1.71
CLK4-202ENST00000519132 SPINK7P58062 85 aa4.4□□□□□ -1.71
CLK4-202ENST00000519132 C20orf166-AS1Q96NR2 134 aa4.39□□□□□ -1.71
CLK4-202ENST00000519132 FBN3Q75N90 2809 aa4.39□□□□□ -1.71
CLK4-202ENST00000519132 NUPR2A6NF83 97 aa4.39□□□□□ -1.71
CLK4-202ENST00000519132 STAB2Q8WWQ8 2551 aa4.39□□□□□ -1.71
CLK4-202ENST00000519132 CNBPP62633 177 aaKnown RBP4.39□□□□□ -1.71
CLK4-202ENST00000519132 DYNC2H1Q8NCM8 4307 aaKnown RBP4.39□□□□□ -1.71
CLK4-202ENST00000519132 LINC00483Q53H64 154 aa4.38□□□□□ -1.71
CLK4-202ENST00000519132 PDE6GP18545 87 aa4.37□□□□□ -1.71
CLK4-202ENST00000519132 SPANXA2-OT1Q8N9U9 137 aa4.37□□□□□ -1.71
CLK4-202ENST00000519132 APLNQ9ULZ1 77 aa4.37□□□□□ -1.71
CLK4-202ENST00000519132 A8MUU9 505 aa4.36□□□□□ -1.71
CLK4-202ENST00000519132 COX7B2Q8TF08 81 aa4.36□□□□□ -1.71
CLK4-202ENST00000519132 LINC00167Q96N53 147 aa4.36□□□□□ -1.71
CLK4-202ENST00000519132 IGLV4-60A0A075B6I1 120 aa4.36□□□□□ -1.71
CLK4-202ENST00000519132 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.36□□□□□ -1.71
CLK4-202ENST00000519132 LOC110117498A0A087WWA1 95 aa4.36□□□□□ -1.71
CLK4-202ENST00000519132 CCL18P55774 89 aa4.36□□□□□ -1.71
CLK4-202ENST00000519132 LINC00308Q8TCZ7 52 aa4.36□□□□□ -1.71
CLK4-202ENST00000519132 DNAH7Q8WXX0 4024 aa4.36□□□□□ -1.71
CLK4-202ENST00000519132 DNAH10OSP0CZ25 163 aa4.35□□□□□ -1.71
CLK4-202ENST00000519132 LINC01556Q5JQF7 62 aa4.35□□□□□ -1.71
CLK4-202ENST00000519132 PRR34Q9NV39 138 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 272.2 ms