RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 C5orf47Q569G3 176 aa10.93□□□□□ -0.66
SNX2-213ENST00000514949 HIGD2AQ9BW72 106 aa10.93□□□□□ -0.66
SNX2-213ENST00000514949 LRCOL1A6NCL2 159 aa10.91□□□□□ -0.66
SNX2-213ENST00000514949 KRTAP11-1Q8IUC1 163 aa10.91□□□□□ -0.66
SNX2-213ENST00000514949 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.91□□□□□ -0.66
SNX2-213ENST00000514949 PHF5AQ7RTV0 110 aaKnown RBP10.9□□□□□ -0.66
SNX2-213ENST00000514949 B9D2Q9BPU9 175 aa10.9□□□□□ -0.66
SNX2-213ENST00000514949 PLECQ15149 4684 aaKnown RBP10.89□□□□□ -0.67
SNX2-213ENST00000514949 CHTF8P0CG12 524 aa10.89□□□□□ -0.67
SNX2-213ENST00000514949 C4orf26Q17RF5 130 aa10.89□□□□□ -0.67
SNX2-213ENST00000514949 FAM30AQ9NZY2 134 aa10.89□□□□□ -0.67
SNX2-213ENST00000514949 A0A0G2JQZ4 141 aa10.88□□□□□ -0.67
SNX2-213ENST00000514949 SMIM26A0A096LP01 95 aa10.88□□□□□ -0.67
SNX2-213ENST00000514949 HCG22E2RYF7 251 aa10.88□□□□□ -0.67
SNX2-213ENST00000514949 UBE2AP49459 152 aa10.88□□□□□ -0.67
SNX2-213ENST00000514949 LINC00474Q9P2X8 69 aa10.88□□□□□ -0.67
SNX2-213ENST00000514949 NBDYA0A0U1RRE5 68 aa10.87□□□□□ -0.67
SNX2-213ENST00000514949 A0A087WSZ3 146 aa10.86□□□□□ -0.67
SNX2-213ENST00000514949 ZCCHC13Q8WW36 166 aaKnown RBP10.86□□□□□ -0.67
SNX2-213ENST00000514949 CSMD3Q7Z407 3707 aa10.86□□□□□ -0.67
SNX2-213ENST00000514949 DNAH7Q8WXX0 4024 aa10.85□□□□□ -0.67
SNX2-213ENST00000514949 Q6ZRN7 208 aaPredicted RBP10.85□□□□□ -0.67
SNX2-213ENST00000514949 KRTAP13-1Q8IUC0 172 aa10.82□□□□□ -0.68
SNX2-213ENST00000514949 TENM2Q9NT68 2774 aa10.82□□□□□ -0.68
SNX2-213ENST00000514949 FP248Q71RG6 208 aaPredicted RBP10.82□□□□□ -0.68
SNX2-213ENST00000514949 NUPR2A6NF83 97 aa10.81□□□□□ -0.68
SNX2-213ENST00000514949 HRCT1Q6UXD1 115 aa10.8□□□□□ -0.68
SNX2-213ENST00000514949 VPS13DQ5THJ4 4388 aa10.8□□□□□ -0.68
SNX2-213ENST00000514949 MDFIQ99750 246 aa10.79□□□□□ -0.68
SNX2-213ENST00000514949 SRRM2Q9UQ35 2752 aaKnown RBP10.79□□□□□ -0.68
SNX2-213ENST00000514949 KRTAP29-1A8MX34 341 aaPredicted RBP10.78□□□□□ -0.68
SNX2-213ENST00000514949 LINC00472Q9H8W2 130 aa10.78□□□□□ -0.68
SNX2-213ENST00000514949 DEFB116Q30KQ4 102 aa10.77□□□□□ -0.69
SNX2-213ENST00000514949 PANO1I0J062 215 aa10.76□□□□□ -0.69
SNX2-213ENST00000514949 PRR15Q8IV56 129 aa10.75□□□□□ -0.69
SNX2-213ENST00000514949 SPACA4Q8TDM5 124 aa10.74□□□□□ -0.69
SNX2-213ENST00000514949 A8MWP4 228 aa10.73□□□□□ -0.69
SNX2-213ENST00000514949 RPL37AP61513 92 aaKnown RBP10.71□□□□□ -0.69
SNX2-213ENST00000514949 WFDC13Q8IUB5 93 aa10.71□□□□□ -0.69
SNX2-213ENST00000514949 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.69□□□□□ -0.7
SNX2-213ENST00000514949 NDUFB1O75438 58 aa10.69□□□□□ -0.7
SNX2-213ENST00000514949 FAM229BQ4G0N7 80 aa10.69□□□□□ -0.7
SNX2-213ENST00000514949 STARD9Q9P2P6 4700 aa10.68□□□□□ -0.7
SNX2-213ENST00000514949 hDV103S1A0JD37 113 aa10.67□□□□□ -0.7
SNX2-213ENST00000514949 MP68P56378 58 aa10.67□□□□□ -0.7
SNX2-213ENST00000514949 LINC00483Q53H64 154 aa10.67□□□□□ -0.7
SNX2-213ENST00000514949 CASC2Q6XLA1 102 aa10.67□□□□□ -0.7
SNX2-213ENST00000514949 CYP4F30PQ9H0H9 118 aa10.67□□□□□ -0.7
SNX2-213ENST00000514949 A0A087WTM6 91 aa10.66□□□□□ -0.7
SNX2-213ENST00000514949 PRKDCP78527 4128 aaKnown RBP10.66□□□□□ -0.7
SNX2-213ENST00000514949 H3BPC8 53 aa10.66□□□□□ -0.7
SNX2-213ENST00000514949 HECTD4Q9Y4D8 3996 aa10.65□□□□□ -0.71
SNX2-213ENST00000514949 DNAH17Q9UFH2 4485 aa10.63□□□□□ -0.71
SNX2-213ENST00000514949 TRAV22A0A0B4J277 110 aa10.62□□□□□ -0.71
SNX2-213ENST00000514949 C1orf64Q8NEQ6 169 aa10.61□□□□□ -0.71
SNX2-213ENST00000514949 Q96NJ1 140 aa10.6□□□□□ -0.71
SNX2-213ENST00000514949 ZNF706Q9Y5V0 76 aaPredicted RBP10.6□□□□□ -0.71
SNX2-213ENST00000514949 LINC00336Q6ZUF6 198 aa10.6□□□□□ -0.71
SNX2-213ENST00000514949 MMP24-AS1A0A0U1RRL7 71 aa10.59□□□□□ -0.71
SNX2-213ENST00000514949 Q6ZR54 194 aa10.59□□□□□ -0.71
SNX2-213ENST00000514949 ASB16-AS1Q495Z4 193 aa10.58□□□□□ -0.72
SNX2-213ENST00000514949 PLAC8Q9NZF1 115 aa10.58□□□□□ -0.72
SNX2-213ENST00000514949 IGLV5-52A0A0A0MRZ9 124 aa10.58□□□□□ -0.72
SNX2-213ENST00000514949 LINC00208Q96KT6 92 aa10.58□□□□□ -0.72
SNX2-213ENST00000514949 DNAH2Q9P225 4427 aa10.58□□□□□ -0.72
SNX2-213ENST00000514949 H0Y9P7 68 aa10.57□□□□□ -0.72
SNX2-213ENST00000514949 RTL8CO15255 209 aa10.57□□□□□ -0.72
SNX2-213ENST00000514949 SPANXA2-OT1Q8N9U9 137 aa10.57□□□□□ -0.72
SNX2-213ENST00000514949 DNAH8Q96JB1 4490 aa10.56□□□□□ -0.72
SNX2-213ENST00000514949 IGLV9-49A0A0B4J1Y8 123 aa10.56□□□□□ -0.72
SNX2-213ENST00000514949 WWC2-AS2Q96NR7 200 aa10.56□□□□□ -0.72
SNX2-213ENST00000514949 PSORS1C2Q9UIG4 136 aa10.55□□□□□ -0.72
SNX2-213ENST00000514949 PRO0628Q9UI54 55 aa10.54□□□□□ -0.72
SNX2-213ENST00000514949 MPLKIPQ8TAP9 179 aa10.54□□□□□ -0.72
SNX2-213ENST00000514949 ZNF861PO60384 105 aa10.52□□□□□ -0.72
SNX2-213ENST00000514949 Q1T7F1 81 aa10.52□□□□□ -0.72
SNX2-213ENST00000514949 MOBPQ13875 183 aa10.52□□□□□ -0.73
SNX2-213ENST00000514949 KMT2AQ03164 3969 aa10.51□□□□□ -0.73
SNX2-213ENST00000514949 TP53AIP1Q9HCN2 124 aa10.49□□□□□ -0.73
SNX2-213ENST00000514949 PRR4Q16378 134 aa10.46□□□□□ -0.73
SNX2-213ENST00000514949 C8orf17Q9NRJ1 99 aa10.46□□□□□ -0.73
SNX2-213ENST00000514949 FRAS1Q86XX4 4008 aa10.45□□□□□ -0.74
SNX2-213ENST00000514949 A0A1B0GVX0 72 aa10.45□□□□□ -0.74
SNX2-213ENST00000514949 KRTAP21-3Q3LHN1 58 aa10.43□□□□□ -0.74
SNX2-213ENST00000514949 C1orf134Q5TEV5 83 aa10.42□□□□□ -0.74
SNX2-213ENST00000514949 FBN3Q75N90 2809 aa10.42□□□□□ -0.74
SNX2-213ENST00000514949 MEGF8Q7Z7M0 2845 aa10.41□□□□□ -0.74
SNX2-213ENST00000514949 DNHD1Q96M86 4753 aa10.4□□□□□ -0.74
SNX2-213ENST00000514949 DNAH6Q9C0G6 4158 aa10.4□□□□□ -0.75
SNX2-213ENST00000514949 IGLV7-43P04211 117 aa10.39□□□□□ -0.75
SNX2-213ENST00000514949 ANAPC11Q9NYG5 84 aa10.39□□□□□ -0.75
SNX2-213ENST00000514949 IGLV7-46A0A075B6I9 117 aa10.39□□□□□ -0.75
SNX2-213ENST00000514949 V9GYY9 64 aa10.38□□□□□ -0.75
SNX2-213ENST00000514949 CDK2AP2O75956 126 aa10.37□□□□□ -0.75
SNX2-213ENST00000514949 IGHV6-1A0A0B4J1U7 121 aa10.37□□□□□ -0.75
SNX2-213ENST00000514949 TGP01266 2768 aa10.36□□□□□ -0.75
SNX2-213ENST00000514949 BRK1Q8WUW1 75 aa10.36□□□□□ -0.75
SNX2-213ENST00000514949 MRPL34Q9BQ48 92 aaKnown RBP10.36□□□□□ -0.75
SNX2-213ENST00000514949 CD164Q04900 197 aa10.36□□□□□ -0.75
SNX2-213ENST00000514949 DNAH11Q96DT5 4516 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms