RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TRGV4A0A0C4DH28 118 aa3.47□□□□□ -1.85
TRAPPC11-209ENST00000512476 NOTCH2Q04721 2471 aa3.47□□□□□ -1.85
TRAPPC11-209ENST00000512476 DSCR10P59022 87 aa3.47□□□□□ -1.85
TRAPPC11-209ENST00000512476 ATP5EP2Q5VTU8 51 aa3.47□□□□□ -1.85
TRAPPC11-209ENST00000512476 AMELXQ99217 191 aa3.47□□□□□ -1.85
TRAPPC11-209ENST00000512476 HIVEP1P15822 2718 aa3.47□□□□□ -1.85
TRAPPC11-209ENST00000512476 DEFB131AP59861 70 aa3.46□□□□□ -1.85
TRAPPC11-209ENST00000512476 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.85
TRAPPC11-209ENST00000512476 TRAV21A0A0B4J279 112 aa3.46□□□□□ -1.86
TRAPPC11-209ENST00000512476 A8MTW9 85 aa3.46□□□□□ -1.86
TRAPPC11-209ENST00000512476 MTORP42345 2549 aa3.46□□□□□ -1.86
TRAPPC11-209ENST00000512476 A0A1B0GUT8 65 aa3.45□□□□□ -1.86
TRAPPC11-209ENST00000512476 LINC00208Q96KT6 92 aa3.45□□□□□ -1.86
TRAPPC11-209ENST00000512476 NSD1Q96L73 2696 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC11-209ENST00000512476 FCER1GP30273 86 aa3.44□□□□□ -1.86
TRAPPC11-209ENST00000512476 SPINK13Q1W4C9 94 aa3.44□□□□□ -1.86
TRAPPC11-209ENST00000512476 CNFNQ9BYD5 112 aa3.44□□□□□ -1.86
TRAPPC11-209ENST00000512476 PLAC8Q9NZF1 115 aa3.44□□□□□ -1.86
TRAPPC11-209ENST00000512476 XP32Q5T750 250 aa3.43□□□□□ -1.86
TRAPPC11-209ENST00000512476 F8P00451 2351 aa3.43□□□□□ -1.86
TRAPPC11-209ENST00000512476 BAHCC1Q9P281 2608 aa3.43□□□□□ -1.86
TRAPPC11-209ENST00000512476 NF1P21359 2839 aa3.43□□□□□ -1.86
TRAPPC11-209ENST00000512476 Q96NJ1 140 aa3.42□□□□□ -1.86
TRAPPC11-209ENST00000512476 SETXQ7Z333 2677 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-209ENST00000512476 RPL37AP61513 92 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-209ENST00000512476 TIMM8BQ9Y5J9 83 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC11-209ENST00000512476 C2CD3Q4AC94 2353 aa3.42□□□□□ -1.86
TRAPPC11-209ENST00000512476 FLNBO75369 2602 aaKnown RBP3.41□□□□□ -1.86
TRAPPC11-209ENST00000512476 A0A1W2PNN7 141 aa3.41□□□□□ -1.86
TRAPPC11-209ENST00000512476 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
TRAPPC11-209ENST00000512476 KRTAP11-1Q8IUC1 163 aa3.41□□□□□ -1.86
TRAPPC11-209ENST00000512476 WFDC9Q8NEX5 89 aa3.41□□□□□ -1.86
TRAPPC11-209ENST00000512476 SPRR4Q96PI1 79 aa3.41□□□□□ -1.86
TRAPPC11-209ENST00000512476 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
TRAPPC11-209ENST00000512476 LINC00472Q9H8W2 130 aa3.4□□□□□ -1.86
TRAPPC11-209ENST00000512476 LINC00846Q9NV44 126 aa3.4□□□□□ -1.87
TRAPPC11-209ENST00000512476 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC11-209ENST00000512476 IGKV4-1P06312 121 aa3.39□□□□□ -1.87
TRAPPC11-209ENST00000512476 TRGV2A0A075B6R0 118 aa3.39□□□□□ -1.87
TRAPPC11-209ENST00000512476 TRGV1A0A0A0MS02 117 aa3.39□□□□□ -1.87
TRAPPC11-209ENST00000512476 GAS8-AS1O95177 125 aa3.39□□□□□ -1.87
TRAPPC11-209ENST00000512476 HTN1P15515 57 aa3.39□□□□□ -1.87
TRAPPC11-209ENST00000512476 NREPQ16612 68 aa3.39□□□□□ -1.87
TRAPPC11-209ENST00000512476 WNK1Q9H4A3 2382 aa3.39□□□□□ -1.87
TRAPPC11-209ENST00000512476 ENHOQ6UWT2 76 aa3.38□□□□□ -1.87
TRAPPC11-209ENST00000512476 SORL1Q92673 2214 aa3.38□□□□□ -1.87
TRAPPC11-209ENST00000512476 MGPP08493 103 aa3.38□□□□□ -1.87
TRAPPC11-209ENST00000512476 LINC00315P59091 139 aa3.38□□□□□ -1.87
TRAPPC11-209ENST00000512476 SETD2Q9BYW2 2564 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-209ENST00000512476 LINC01546A6NGU7 62 aa3.36□□□□□ -1.87
TRAPPC11-209ENST00000512476 UQCR11O14957 56 aa3.36□□□□□ -1.87
TRAPPC11-209ENST00000512476 TMEM263Q8WUH6 116 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-209ENST00000512476 RPL39LQ96EH5 51 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-209ENST00000512476 H0Y9P7 68 aa3.35□□□□□ -1.87
TRAPPC11-209ENST00000512476 SMIM2Q9BVW6 85 aa3.35□□□□□ -1.87
TRAPPC11-209ENST00000512476 TRBV30A0A0K0K1B3 111 aa3.35□□□□□ -1.87
TRAPPC11-209ENST00000512476 M0QY20 66 aa3.35□□□□□ -1.87
TRAPPC11-209ENST00000512476 FBN1P35555 2871 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-209ENST00000512476 KRTAP10-11P60412 298 aa3.35□□□□□ -1.87
TRAPPC11-209ENST00000512476 TENM1Q9UKZ4 2725 aa3.35□□□□□ -1.87
TRAPPC11-209ENST00000512476 TEP1Q99973 2627 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-209ENST00000512476 JMJD1CQ15652 2540 aa3.35□□□□□ -1.87
TRAPPC11-209ENST00000512476 KRTAP9-6A0A140TA67 174 aa3.34□□□□□ -1.87
TRAPPC11-209ENST00000512476 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.87
TRAPPC11-209ENST00000512476 NIPBLQ6KC79 2804 aaeCLIP3.34□□□□□ -1.87
TRAPPC11-209ENST00000512476 POLR2KP53803 58 aaKnown RBP3.34□□□□□ -1.88
TRAPPC11-209ENST00000512476 NOP10Q9NPE3 64 aaKnown RBP3.34□□□□□ -1.88
TRAPPC11-209ENST00000512476 ATRQ13535 2644 aa3.33□□□□□ -1.88
TRAPPC11-209ENST00000512476 ZNF625Q96I27 306 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-209ENST00000512476 PRB2P02812 416 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-209ENST00000512476 DEFB135Q30KP9 77 aa3.33□□□□□ -1.88
TRAPPC11-209ENST00000512476 Q8N9L7 120 aa3.32□□□□□ -1.88
TRAPPC11-209ENST00000512476 VWFP04275 2813 aa3.32□□□□□ -1.88
TRAPPC11-209ENST00000512476 LINC00959A0A1B0GUT2 108 aa3.32□□□□□ -1.88
TRAPPC11-209ENST00000512476 IGLV6-57P01721 117 aa3.32□□□□□ -1.88
TRAPPC11-209ENST00000512476 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
TRAPPC11-209ENST00000512476 Q6ZRN7 208 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC11-209ENST00000512476 I3L3M4 83 aa3.31□□□□□ -1.88
TRAPPC11-209ENST00000512476 DEFB104AQ8WTQ1 72 aa3.31□□□□□ -1.88
TRAPPC11-209ENST00000512476 DEFB130BP0DP73 79 aa3.3□□□□□ -1.88
TRAPPC11-209ENST00000512476 DEFB130AP0DP74 79 aa3.3□□□□□ -1.88
TRAPPC11-209ENST00000512476 TRRAPQ9Y4A5 3859 aa3.3□□□□□ -1.88
TRAPPC11-209ENST00000512476 DEFB4AO15263 64 aa3.3□□□□□ -1.88
TRAPPC11-209ENST00000512476 NOTCH3Q9UM47 2321 aa3.29□□□□□ -1.88
TRAPPC11-209ENST00000512476 RPL39P62891 51 aaKnown RBP3.29□□□□□ -1.88
TRAPPC11-209ENST00000512476 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
TRAPPC11-209ENST00000512476 IGIPA6NJ69 53 aa3.29□□□□□ -1.88
TRAPPC11-209ENST00000512476 MAST4O15021 2626 aa3.29□□□□□ -1.88
TRAPPC11-209ENST00000512476 SPART-AS1P0CW21 52 aa3.28□□□□□ -1.88
TRAPPC11-209ENST00000512476 KRTAP13-2Q52LG2 175 aa3.28□□□□□ -1.88
TRAPPC11-209ENST00000512476 K7EIL1 84 aa3.28□□□□□ -1.88
TRAPPC11-209ENST00000512476 ZCCHC13Q8WW36 166 aaKnown RBP3.28□□□□□ -1.88
TRAPPC11-209ENST00000512476 CMYA5Q8N3K9 4069 aa3.28□□□□□ -1.89
TRAPPC11-209ENST00000512476 STAB1Q9NY15 2570 aa3.27□□□□□ -1.89
TRAPPC11-209ENST00000512476 PRO0255Q9UI72 69 aa3.27□□□□□ -1.89
TRAPPC11-209ENST00000512476 LOC110117498A0A087WWA1 95 aa3.27□□□□□ -1.89
TRAPPC11-209ENST00000512476 ANK2Q01484 3957 aa3.26□□□□□ -1.89
TRAPPC11-209ENST00000512476 PLNP26678 52 aa3.26□□□□□ -1.89
TRAPPC11-209ENST00000512476 KRTAP19-1Q8IUB9 90 aa3.26□□□□□ -1.89
TRAPPC11-209ENST00000512476 DNAH3Q8TD57 4116 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms