RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 C14orf132Q9NPU4 83 aa5.03□□□□□ -1.6
HTT-209ENST00000512068 PDE6GP18545 87 aa5.02□□□□□ -1.61
HTT-209ENST00000512068 NDUFV3P56181 108 aaKnown RBP5.02□□□□□ -1.61
HTT-209ENST00000512068 GAGE2AQ6NT46 116 aa5.02□□□□□ -1.61
HTT-209ENST00000512068 ACYP1P07311 99 aa5.01□□□□□ -1.61
HTT-209ENST00000512068 KRTAP10-1P60331 282 aa5.01□□□□□ -1.61
HTT-209ENST00000512068 SCXQ7RTU7 201 aa5.01□□□□□ -1.61
HTT-209ENST00000512068 CIRBP-AS1Q8TBR5 109 aa5.01□□□□□ -1.61
HTT-209ENST00000512068 ZNF706Q9Y5V0 76 aaPredicted RBP5.01□□□□□ -1.61
HTT-209ENST00000512068 ST20-AS1Q8NBB2 130 aa5□□□□□ -1.61
HTT-209ENST00000512068 OBSCN-AS1Q96MR7 158 aa5□□□□□ -1.61
HTT-209ENST00000512068 PSORS1C2Q9UIG4 136 aa5□□□□□ -1.61
HTT-209ENST00000512068 IGLV5-48A0A075B6I7 105 aa4.99□□□□□ -1.61
HTT-209ENST00000512068 FAM240AA0A1B0GVK7 77 aa4.99□□□□□ -1.61
HTT-209ENST00000512068 ERC2-IT1O76042 136 aa4.99□□□□□ -1.61
HTT-209ENST00000512068 Q6ZSA8 131 aa4.99□□□□□ -1.61
HTT-209ENST00000512068 KRTAP11-1Q8IUC1 163 aa4.99□□□□□ -1.61
HTT-209ENST00000512068 ZNF861PO60384 105 aa4.98□□□□□ -1.61
HTT-209ENST00000512068 CCKP06307 115 aa4.98□□□□□ -1.61
HTT-209ENST00000512068 Q8N377 158 aa4.98□□□□□ -1.61
HTT-209ENST00000512068 LOC110117498A0A087WWA1 95 aa4.97□□□□□ -1.61
HTT-209ENST00000512068 KRTAP4-5Q9BYR2 181 aa4.97□□□□□ -1.61
HTT-209ENST00000512068 DNAH17Q9UFH2 4485 aa4.97□□□□□ -1.61
HTT-209ENST00000512068 DNAH2Q9P225 4427 aa4.96□□□□□ -1.61
HTT-209ENST00000512068 IGLV7-43P04211 117 aa4.96□□□□□ -1.62
HTT-209ENST00000512068 LINC01547P58512 204 aaPredicted RBP4.96□□□□□ -1.62
HTT-209ENST00000512068 HAMPP81172 84 aa4.96□□□□□ -1.62
HTT-209ENST00000512068 A0A1B0GVY2 172 aa4.95□□□□□ -1.62
HTT-209ENST00000512068 Q6ZQT0 140 aa4.95□□□□□ -1.62
HTT-209ENST00000512068 KRTAP13-1Q8IUC0 172 aa4.95□□□□□ -1.62
HTT-209ENST00000512068 C3orf22Q8N5N4 141 aa4.95□□□□□ -1.62
HTT-209ENST00000512068 FRAS1Q86XX4 4008 aa4.95□□□□□ -1.62
HTT-209ENST00000512068 TRBV7-4A0A0J9YYF1 115 aa4.94□□□□□ -1.62
HTT-209ENST00000512068 C9orf153Q5TBE3 101 aa4.94□□□□□ -1.62
HTT-209ENST00000512068 UBL5Q9BZL1 73 aa4.94□□□□□ -1.62
HTT-209ENST00000512068 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
HTT-209ENST00000512068 HYDINQ4G0P3 5121 aa4.93□□□□□ -1.62
HTT-209ENST00000512068 SPRR1BP22528 89 aa4.93□□□□□ -1.62
HTT-209ENST00000512068 Q6JHZ5 121 aa4.93□□□□□ -1.62
HTT-209ENST00000512068 SPRR4Q96PI1 79 aa4.93□□□□□ -1.62
HTT-209ENST00000512068 SIGMAR1Q99720 223 aa4.93□□□□□ -1.62
HTT-209ENST00000512068 RPL37AP61513 92 aaKnown RBP4.92□□□□□ -1.62
HTT-209ENST00000512068 IGLV9-49A0A0B4J1Y8 123 aa4.91□□□□□ -1.62
HTT-209ENST00000512068 SACSQ9NZJ4 4579 aa4.9□□□□□ -1.62
HTT-209ENST00000512068 A0A1B0GW54 56 aa4.9□□□□□ -1.63
HTT-209ENST00000512068 LINC00483Q53H64 154 aa4.9□□□□□ -1.63
HTT-209ENST00000512068 SMIM29Q86T20 159 aa4.9□□□□□ -1.63
HTT-209ENST00000512068 LINC00643Q86TS7 51 aa4.9□□□□□ -1.63
HTT-209ENST00000512068 IGLV8-61A0A075B6I0 122 aa4.89□□□□□ -1.63
HTT-209ENST00000512068 ATP5EP2Q5VTU8 51 aa4.89□□□□□ -1.63
HTT-209ENST00000512068 Q8NBF4 154 aa4.89□□□□□ -1.63
HTT-209ENST00000512068 LINC00846Q9NV44 126 aa4.89□□□□□ -1.63
HTT-209ENST00000512068 XGP55808 180 aa4.88□□□□□ -1.63
HTT-209ENST00000512068 NREPQ16612 68 aa4.88□□□□□ -1.63
HTT-209ENST00000512068 IGFL1Q6UW32 110 aa4.88□□□□□ -1.63
HTT-209ENST00000512068 MPLKIPQ8TAP9 179 aa4.88□□□□□ -1.63
HTT-209ENST00000512068 SMR3BP02814 79 aaPredicted RBP4.87□□□□□ -1.63
HTT-209ENST00000512068 MT-ATP8P03928 68 aa4.87□□□□□ -1.63
HTT-209ENST00000512068 MOBPQ13875 183 aa4.87□□□□□ -1.63
HTT-209ENST00000512068 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
HTT-209ENST00000512068 A0A1W2PNM2 257 aa4.86□□□□□ -1.63
HTT-209ENST00000512068 SPINK6Q6UWN8 80 aa4.86□□□□□ -1.63
HTT-209ENST00000512068 FAT2Q9NYQ8 4349 aa4.86□□□□□ -1.63
HTT-209ENST00000512068 DNAH11Q96DT5 4516 aa4.85□□□□□ -1.63
HTT-209ENST00000512068 FAM229BQ4G0N7 80 aa4.85□□□□□ -1.63
HTT-209ENST00000512068 Q6ZVQ6 151 aa4.85□□□□□ -1.63
HTT-209ENST00000512068 RYR2Q92736 4967 aa4.85□□□□□ -1.63
HTT-209ENST00000512068 A0A087WSZ3 146 aa4.84□□□□□ -1.63
HTT-209ENST00000512068 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
HTT-209ENST00000512068 IGKV3D-7A0A0C4DH55 119 aa4.84□□□□□ -1.63
HTT-209ENST00000512068 CRYGAP11844 174 aa4.84□□□□□ -1.63
HTT-209ENST00000512068 Q6Q795 121 aa4.84□□□□□ -1.63
HTT-209ENST00000512068 ANAPC11Q9NYG5 84 aa4.84□□□□□ -1.63
HTT-209ENST00000512068 PKD1P98161 4303 aa4.84□□□□□ -1.64
HTT-209ENST00000512068 BPY2O14599 106 aa4.83□□□□□ -1.64
HTT-209ENST00000512068 HIST1H4AP62805 103 aaKnown RBP4.83□□□□□ -1.64
HTT-209ENST00000512068 SSBP3-AS1Q7Z2R9 100 aa4.83□□□□□ -1.64
HTT-209ENST00000512068 IMUPQ9GZP8 106 aa4.83□□□□□ -1.64
HTT-209ENST00000512068 SS18L2Q9UHA2 77 aa4.83□□□□□ -1.64
HTT-209ENST00000512068 DNAH8Q96JB1 4490 aa4.82□□□□□ -1.64
HTT-209ENST00000512068 A0A0G2JQZ4 141 aa4.82□□□□□ -1.64
HTT-209ENST00000512068 TRBV7-7A0A0K0K1E9 115 aa4.82□□□□□ -1.64
HTT-209ENST00000512068 CDK2AP2O75956 126 aa4.82□□□□□ -1.64
HTT-209ENST00000512068 CXCL6P80162 114 aa4.82□□□□□ -1.64
HTT-209ENST00000512068 HRCT1Q6UXD1 115 aa4.82□□□□□ -1.64
HTT-209ENST00000512068 SCGB1A1P11684 91 aa4.81□□□□□ -1.64
HTT-209ENST00000512068 CD164Q04900 197 aa4.79□□□□□ -1.64
HTT-209ENST00000512068 TYMSOSQ8TAI1 123 aa4.79□□□□□ -1.64
HTT-209ENST00000512068 KMT2CQ8NEZ4 4911 aaKnown RBP4.78□□□□□ -1.64
HTT-209ENST00000512068 A0A087X002 238 aa4.77□□□□□ -1.65
HTT-209ENST00000512068 J3KT08 172 aa4.77□□□□□ -1.65
HTT-209ENST00000512068 Q5VSD8 79 aa4.77□□□□□ -1.65
HTT-209ENST00000512068 FAM236AA0A1B0GUQ0 79 aa4.76□□□□□ -1.65
HTT-209ENST00000512068 FAM236BA0A1B0GV22 79 aa4.76□□□□□ -1.65
HTT-209ENST00000512068 KRTAP1-4P0C5Y4 121 aa4.76□□□□□ -1.65
HTT-209ENST00000512068 LIMD2Q9BT23 127 aa4.76□□□□□ -1.65
HTT-209ENST00000512068 LRP1BQ9NZR2 4599 aa4.75□□□□□ -1.65
HTT-209ENST00000512068 NDUFB1O75438 58 aa4.75□□□□□ -1.65
HTT-209ENST00000512068 PKHD1P08F94 4074 aa4.75□□□□□ -1.65
HTT-209ENST00000512068 DYNC1H1Q14204 4646 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms